RNA–Protein interactions for RNA: YER148W

SPT15, Transcript of TATA-binding protein, yeastyeast

Gene SPT15, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT15YER148W ACO2P39533 789 aa6.23□□□□□ -1.41
SPT15YER148W QDR2P40474 542 aa6.23□□□□□ -1.41
SPT15YER148W TCB3Q03640 1545 aaKnown RBP6.23□□□□□ -1.41
SPT15YER148W TY1B-DR4Q07793 1604 aa6.22□□□□□ -1.41
SPT15YER148W RGP1P16664 663 aa6.22□□□□□ -1.41
SPT15YER148W SKP1P52286 194 aa6.22□□□□□ -1.41
SPT15YER148W UFD2P54860 961 aa6.22□□□□□ -1.41
SPT15YER148W NAM8Q00539 523 aaKnown RBP6.22□□□□□ -1.41
SPT15YER148W MSC6Q08818 692 aaKnown RBP6.22□□□□□ -1.41
SPT15YER148W RPP1AP05318 106 aaPredicted RBP6.21□□□□□ -1.42
SPT15YER148W RPB10P22139 70 aa6.21□□□□□ -1.42
SPT15YER148W PPX1P38698 397 aa6.21□□□□□ -1.42
SPT15YER148W HXT8P40886 569 aa6.21□□□□□ -1.42
SPT15YER148W MTO1P53070 669 aa6.21□□□□□ -1.42
SPT15YER148W TY1A-MR1Q04215 440 aa6.21□□□□□ -1.42
SPT15YER148W SMC1P32908 1225 aa6.2□□□□□ -1.42
SPT15YER148W YHL050CP38721 697 aa6.2□□□□□ -1.42
SPT15YER148W YHR219WP38900 624 aa6.2□□□□□ -1.42
SPT15YER148W ROG3P43602 733 aa6.2□□□□□ -1.42
SPT15YER148W TRS120Q04183 1289 aa6.2□□□□□ -1.42
SPT15YER148W NUT2Q06213 157 aa6.2□□□□□ -1.42
SPT15YER148W SUT1P53032 299 aaKnown RBP6.19□□□□□ -1.42
SPT15YER148W YOR296WQ08748 1289 aa6.19□□□□□ -1.42
SPT15YER148W MSN1P22148 382 aa6.18□□□□□ -1.42
SPT15YER148W ISW1P38144 1129 aa6.18□□□□□ -1.42
SPT15YER148W GIP1P38229 639 aa6.18□□□□□ -1.42
SPT15YER148W YBR287WP38355 427 aa6.18□□□□□ -1.42
SPT15YER148W FRT1Q99332 602 aa6.18□□□□□ -1.42
SPT15YER148W CCP1P00431 361 aa6.17□□□□□ -1.42
SPT15YER148W DIT1P21623 536 aa6.17□□□□□ -1.42
SPT15YER148W HEM3P28789 327 aa6.17□□□□□ -1.42
SPT15YER148W MRPL16P38064 232 aa6.17□□□□□ -1.42
SPT15YER148W FIR1P40020 876 aa6.17□□□□□ -1.42
SPT15YER148W NTA1P40354 457 aa6.17□□□□□ -1.42
SPT15YER148W CUS1Q02554 436 aaPredicted RBP6.17□□□□□ -1.42
SPT15YER148W STB3Q12427 513 aa6.17□□□□□ -1.42
SPT15YER148W YIR007WP40566 764 aa6.16□□□□□ -1.42
SPT15YER148W MNL2Q12205 849 aa6.16□□□□□ -1.42
SPT15YER148W APM2P38700 605 aa6.15□□□□□ -1.42
SPT15YER148W RAD55P38953 406 aa6.15□□□□□ -1.42
SPT15YER148W IPL1P38991 367 aa6.15□□□□□ -1.42
SPT15YER148W RGD2P43556 714 aa6.15□□□□□ -1.42
SPT15YER148W CUZ1P53899 274 aa6.15□□□□□ -1.42
SPT15YER148W YMR265CQ03508 461 aaKnown RBP6.15□□□□□ -1.42
SPT15YER148W YDL176WQ12027 708 aa6.15□□□□□ -1.42
SPT15YER148W YDR461C-AQ2V2P7 80 aa6.15□□□□□ -1.42
SPT15YER148W BSD2P38356 321 aa6.14□□□□□ -1.43
SPT15YER148W CAF120P53836 1060 aa6.14□□□□□ -1.43
SPT15YER148W RSC4Q02206 625 aa6.14□□□□□ -1.43
SPT15YER148W NAB2P32505 525 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43 RIP-Chip
SPT15YER148W IRS4P36115 615 aaKnown RBP6.13□□□□□ -1.43
SPT15YER148W NCL1P38205 684 aaKnown RBP6.13□□□□□ -1.43
SPT15YER148W ITC1P53125 1264 aa6.13□□□□□ -1.43
SPT15YER148W CDC55Q00362 526 aa6.13□□□□□ -1.43
SPT15YER148W HEH2Q03281 663 aa6.13□□□□□ -1.43
SPT15YER148W GAR1P28007 205 aaKnown RBP6.12□□□□□ -1.43
SPT15YER148W PSY2P40164 858 aa6.12□□□□□ -1.43
SPT15YER148W KRE33P53914 1056 aaKnown RBP6.12□□□□□ -1.43
SPT15YER148W YNL011CP53980 444 aa6.12□□□□□ -1.43
SPT15YER148W GPI13Q07830 1017 aa6.12□□□□□ -1.43
SPT15YER148W WHI5Q12416 295 aa6.12□□□□□ -1.43
SPT15YER148W TIF6Q12522 245 aaKnown RBP6.12□□□□□ -1.43
SPT15YER148W ASF1P32447 279 aa6.11□□□□□ -1.43
SPT15YER148W CEM1P39525 442 aa6.11□□□□□ -1.43
SPT15YER148W YER156CP40093 338 aaKnown RBP6.11□□□□□ -1.43
SPT15YER148W SYT1Q06836 1226 aa6.11□□□□□ -1.43
SPT15YER148W FPS1P23900 669 aa6.1□□□□□ -1.43
SPT15YER148W MSC7P38694 644 aa6.1□□□□□ -1.43
SPT15YER148W AIM46P38885 310 aa6.1□□□□□ -1.43
SPT15YER148W YIL165CP40446 119 aa6.1□□□□□ -1.43
SPT15YER148W LYS5P50113 272 aa6.1□□□□□ -1.43
SPT15YER148W YNR040WP53736 256 aa6.1□□□□□ -1.43
SPT15YER148W EMG1Q06287 252 aaKnown RBP6.1□□□□□ -1.43
SPT15YER148W MET4P32389 672 aa6.09□□□□□ -1.43
SPT15YER148W GBP2P25555 427 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
SPT15YER148W THI12P42883 340 aa6.08□□□□□ -1.44
SPT15YER148W THI5P43534 340 aa6.08□□□□□ -1.44
SPT15YER148W THI11P47183 340 aa6.08□□□□□ -1.44
SPT15YER148W SAM37P50110 327 aa6.08□□□□□ -1.44
SPT15YER148W ADE12P80210 433 aaKnown RBP6.08□□□□□ -1.44
SPT15YER148W BSC2Q05611 235 aa6.08□□□□□ -1.44
SPT15YER148W RRP15Q06511 250 aaPredicted RBP6.08□□□□□ -1.44
SPT15YER148W THI13Q07748 340 aa6.08□□□□□ -1.44
SPT15YER148W PHO4P07270 312 aaKnown RBP6.07□□□□□ -1.44
SPT15YER148W IDI1P15496 288 aa6.07□□□□□ -1.44
SPT15YER148W TY1A-DR2Q03964 440 aaKnown RBP6.07□□□□□ -1.44
SPT15YER148W RSC2Q06488 889 aa6.07□□□□□ -1.44
SPT15YER148W GCD6P32501 712 aaKnown RBP6.06□□□□□ -1.44
SPT15YER148W JJJ3P47138 172 aa6.06□□□□□ -1.44
SPT15YER148W DPH6Q12429 685 aa6.06□□□□□ -1.44
SPT15YER148W VPS35P34110 944 aa6.05□□□□□ -1.44
SPT15YER148W POL32P47110 350 aa6.05□□□□□ -1.44
SPT15YER148W CIC1P38779 376 aaKnown RBP6.04□□□□□ -1.44
SPT15YER148W CTR9P89105 1077 aa6.04□□□□□ -1.44
SPT15YER148W NOC3Q07896 663 aaPredicted RBP6.04□□□□□ -1.44
SPT15YER148W ECM5Q03214 1411 aa6.03□□□□□ -1.44
SPT15YER148W ATE1P16639 503 aa6.03□□□□□ -1.44
SPT15YER148W PRK1P40494 810 aa6.03□□□□□ -1.44
SPT15YER148W MSH6Q03834 1242 aa6.03□□□□□ -1.44
SPT15YER148W HPF1Q05164 967 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms