RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC8	YEL013W	BNR1	P40450	1375 aa		4.98	□□□□□ -1.61
VAC8	YEL013W	SSA4	P22202	642 aa	Known RBP	4.97	□□□□□ -1.61
VAC8	YEL013W	YLR346C	Q06139	101 aa		4.97	□□□□□ -1.61
VAC8	YEL013W	PDI1	P17967	522 aa	Known RBP	4.97	□□□□□ -1.61
VAC8	YEL013W	DLD1	P32891	587 aa		4.97	□□□□□ -1.61
VAC8	YEL013W	TSC13	Q99190	310 aa		4.97	□□□□□ -1.61
VAC8	YEL013W	SEC7	P11075	2009 aa	Known RBP	4.96	□□□□□ -1.62
VAC8	YEL013W	SPT2	P06843	333 aa	Predicted RBP	4.96	□□□□□ -1.62
VAC8	YEL013W	MET22	P32179	357 aa		4.96	□□□□□ -1.62
VAC8	YEL013W	TGL4	P36165	910 aa		4.96	□□□□□ -1.62
VAC8	YEL013W	YFL034W	P43564	1073 aa		4.96	□□□□□ -1.62
VAC8	YEL013W	LSC2	P53312	427 aa		4.96	□□□□□ -1.62
VAC8	YEL013W	YDR444W	Q04093	687 aa		4.96	□□□□□ -1.62
VAC8	YEL013W	WTM2	Q12206	467 aa		4.96	□□□□□ -1.62
VAC8	YEL013W	GAR1	P28007	205 aa	Known RBP	4.95	□□□□□ -1.62
VAC8	YEL013W	AIM9	P40053	627 aa	Known RBP	4.95	□□□□□ -1.62
VAC8	YEL013W	ECM23	Q02710	187 aa		4.95	□□□□□ -1.62
VAC8	YEL013W	OPT2	Q06593	877 aa		4.94	□□□□□ -1.62
VAC8	YEL013W	MLP2	P40457	1679 aa		4.94	□□□□□ -1.62
VAC8	YEL013W	USO1	P25386	1790 aa		4.94	□□□□□ -1.62
VAC8	YEL013W	GAL2	P13181	574 aa		4.94	□□□□□ -1.62
VAC8	YEL013W	UTP7	P40055	554 aa	Known RBP	4.94	□□□□□ -1.62
VAC8	YEL013W	UBP2	Q01476	1272 aa		4.94	□□□□□ -1.62
VAC8	YEL013W	HAP4	P14064	554 aa		4.93	□□□□□ -1.62
VAC8	YEL013W	PHO87	P25360	923 aa		4.93	□□□□□ -1.62
VAC8	YEL013W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
VAC8	YEL013W	NTH2	P35172	780 aa		4.93	□□□□□ -1.62
VAC8	YEL013W	SLX8	P40072	274 aa		4.93	□□□□□ -1.62
VAC8	YEL013W	SWI5	P08153	709 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	ALA1	P40825	983 aa	Known RBP	4.92	□□□□□ -1.62
VAC8	YEL013W	YJR098C	P47139	656 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	ACS2	P52910	683 aa	Known RBP	4.92	□□□□□ -1.62
VAC8	YEL013W	LCB5	Q06147	687 aa	Known RBP	4.92	□□□□□ -1.62
VAC8	YEL013W	YSP2	Q06681	1438 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	PUP1	P25043	261 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	THI12	P42883	340 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	THI5	P43534	340 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	THI11	P47183	340 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	THI13	Q07748	340 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	TCB1	Q12466	1186 aa		4.92	□□□□□ -1.62
VAC8	YEL013W	RPS6A	P0CX37	236 aa	Known RBP	4.91	□□□□□ -1.62
VAC8	YEL013W	RPS6B	P0CX38	236 aa	Predicted RBP	4.91	□□□□□ -1.62
VAC8	YEL013W	UBX7	P38349	436 aa		4.91	□□□□□ -1.62
VAC8	YEL013W	RGA2	Q06407	1009 aa		4.91	□□□□□ -1.62
VAC8	YEL013W	SUB2	Q07478	446 aa	Known RBP	4.91	□□□□□ -1.62
VAC8	YEL013W	SUM1	P46676	1062 aa		4.9	□□□□□ -1.62
VAC8	YEL013W	SCW11	P53189	542 aa		4.9	□□□□□ -1.62
VAC8	YEL013W	HAP1	P0CE41	1502 aa		4.89	□□□□□ -1.63
VAC8	YEL013W	NOB1	Q08444	459 aa	Known RBP	4.89	□□□□□ -1.63
VAC8	YEL013W	GLY1	P37303	387 aa	Known RBP	4.89	□□□□□ -1.63
VAC8	YEL013W	GAS4	Q08271	471 aa		4.89	□□□□□ -1.63
VAC8	YEL013W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.88	□□□□□ -1.63
VAC8	YEL013W	DAL1	P32375	460 aa		4.88	□□□□□ -1.63
VAC8	YEL013W	SSN3	P39073	555 aa		4.88	□□□□□ -1.63
VAC8	YEL013W	MSN5	P52918	1224 aa		4.88	□□□□□ -1.63
VAC8	YEL013W	ROM1	P53046	1155 aa		4.88	□□□□□ -1.63
VAC8	YEL013W	URN1	Q06525	465 aa	Known RBP	4.88	□□□□□ -1.63
VAC8	YEL013W	CYT1	P07143	309 aa		4.87	□□□□□ -1.63
VAC8	YEL013W	OSH7	P38755	437 aa		4.87	□□□□□ -1.63
VAC8	YEL013W	YML083C	Q04526	418 aa		4.87	□□□□□ -1.63
VAC8	YEL013W	TY1A-BL	Q12266	440 aa		4.87	□□□□□ -1.63
VAC8	YEL013W	VAN1	P23642	535 aa		4.86	□□□□□ -1.63
VAC8	YEL013W	VTC4	P47075	721 aa		4.86	□□□□□ -1.63
VAC8	YEL013W	AHP1	P38013	176 aa	Known RBP	4.86	□□□□□ -1.63
VAC8	YEL013W	CAF120	P53836	1060 aa		4.84	□□□□□ -1.63
VAC8	YEL013W	RPL34A	P87262	121 aa	Predicted RBP	4.84	□□□□□ -1.63
VAC8	YEL013W	YPQ2	Q06328	317 aa		4.84	□□□□□ -1.63
VAC8	YEL013W	IRE1	P32361	1115 aa		4.83	□□□□□ -1.64
VAC8	YEL013W	JJJ2	P46997	583 aa		4.83	□□□□□ -1.64
VAC8	YEL013W	CWH41	P53008	833 aa		4.83	□□□□□ -1.64
VAC8	YEL013W	TRS33	Q99394	268 aa		4.83	□□□□□ -1.64
VAC8	YEL013W	SLA1	P32790	1244 aa		4.83	□□□□□ -1.64
VAC8	YEL013W	NGR1	P32831	672 aa	Known RBP	4.83	□□□□□ -1.64
VAC8	YEL013W	ACO2	P39533	789 aa		4.83	□□□□□ -1.64
VAC8	YEL013W	PUF6	Q04373	656 aa	Known RBP	4.83	□□□□□ -1.64
VAC8	YEL013W	SSA1	P10591	642 aa	Known RBP	4.82	□□□□□ -1.64
VAC8	YEL013W	PUN1	Q06991	263 aa		4.82	□□□□□ -1.64
VAC8	YEL013W	Q0182	Q9ZZW1	134 aa		4.82	□□□□□ -1.64
VAC8	YEL013W	MCM1	P11746	286 aa		4.81	□□□□□ -1.64
VAC8	YEL013W	UBP1	P25037	809 aa		4.81	□□□□□ -1.64
VAC8	YEL013W	YIR007W	P40566	764 aa		4.81	□□□□□ -1.64
VAC8	YEL013W	UBP15	P50101	1230 aa		4.81	□□□□□ -1.64
VAC8	YEL013W	YMR074C	Q04773	145 aa		4.81	□□□□□ -1.64
VAC8	YEL013W	CDC19	P00549	500 aa	Known RBP	4.8	□□□□□ -1.64
VAC8	YEL013W	RGA1	P39083	1007 aa		4.8	□□□□□ -1.64
VAC8	YEL013W	ROG3	P43602	733 aa		4.8	□□□□□ -1.64
VAC8	YEL013W	TY1A-DR3	Q12441	440 aa		4.8	□□□□□ -1.64
VAC8	YEL013W	YBT1	P32386	1661 aa		4.8	□□□□□ -1.64
VAC8	YEL013W	NUP188	P52593	1655 aa	Known RBP	4.8	□□□□□ -1.64
VAC8	YEL013W	SHM1	P37292	490 aa	Predicted RBP	4.8	□□□□□ -1.64
VAC8	YEL013W	YTA6	P40328	754 aa		4.79	□□□□□ -1.64
VAC8	YEL013W	YNL165W	P53891	406 aa		4.79	□□□□□ -1.64
VAC8	YEL013W	NAM8	Q00539	523 aa	Known RBP	4.79	□□□□□ -1.64
VAC8	YEL013W	TY1A-MR1	Q04215	440 aa		4.79	□□□□□ -1.64
VAC8	YEL013W	YDL176W	Q12027	708 aa		4.79	□□□□□ -1.64
VAC8	YEL013W	CAT8	P39113	1433 aa		4.79	□□□□□ -1.64
VAC8	YEL013W	IPL1	P38991	367 aa		4.78	□□□□□ -1.64
VAC8	YEL013W	CWC15	Q03772	175 aa	Known RBP	4.78	□□□□□ -1.64
VAC8	YEL013W	IML1	P47170	1584 aa		4.78	□□□□□ -1.64
VAC8	YEL013W	RPS31	P05759	152 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms