RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS52	YDR484W	AOS1	Q06624	347 aa		4.13	□□□□□ -1.75
VPS52	YDR484W	YPQ2	Q06328	317 aa		4.13	□□□□□ -1.75
VPS52	YDR484W	YKR073C	P36153	106 aa		4.12	□□□□□ -1.75
VPS52	YDR484W	RRM3	P38766	723 aa		4.12	□□□□□ -1.75
VPS52	YDR484W	ARI1	P53111	347 aa	Known RBP	4.12	□□□□□ -1.75
VPS52	YDR484W	TGL4	P36165	910 aa		4.11	□□□□□ -1.75
VPS52	YDR484W	PRK1	P40494	810 aa		4.11	□□□□□ -1.75
VPS52	YDR484W	KTR7	P40504	517 aa		4.11	□□□□□ -1.75
VPS52	YDR484W	YFL034W	P43564	1073 aa		4.11	□□□□□ -1.75
VPS52	YDR484W	SWI5	P08153	709 aa		4.11	□□□□□ -1.75
VPS52	YDR484W	NAR1	P23503	491 aa	Known RBP	4.11	□□□□□ -1.75
VPS52	YDR484W	SUB2	Q07478	446 aa	Known RBP	4.11	□□□□□ -1.75
VPS52	YDR484W	GIS4	Q04233	774 aa		4.1	□□□□□ -1.75
VPS52	YDR484W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
VPS52	YDR484W	TSC13	Q99190	310 aa		4.1	□□□□□ -1.75
VPS52	YDR484W	GAL2	P13181	574 aa		4.09	□□□□□ -1.75
VPS52	YDR484W	HAP4	P14064	554 aa		4.09	□□□□□ -1.75
VPS52	YDR484W	PHO87	P25360	923 aa		4.09	□□□□□ -1.75
VPS52	YDR484W	YNL165W	P53891	406 aa		4.09	□□□□□ -1.75
VPS52	YDR484W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
VPS52	YDR484W	SFA1	P32771	386 aa		4.09	□□□□□ -1.76
VPS52	YDR484W	TOS1	P38288	455 aa		4.09	□□□□□ -1.76
VPS52	YDR484W	AIM9	P40053	627 aa	Known RBP	4.09	□□□□□ -1.76
VPS52	YDR484W	PUP1	P25043	261 aa		4.08	□□□□□ -1.76
VPS52	YDR484W	YLR122C	Q12312	125 aa		4.08	□□□□□ -1.76
VPS52	YDR484W	SSA1	P10591	642 aa	Known RBP	4.07	□□□□□ -1.76
VPS52	YDR484W	PDI1	P17967	522 aa	Known RBP	4.07	□□□□□ -1.76
VPS52	YDR484W	ELM1	P32801	640 aa		4.07	□□□□□ -1.76
VPS52	YDR484W	UBP5	P39944	805 aa		4.07	□□□□□ -1.76
VPS52	YDR484W	CTH1	P47976	325 aa		4.07	□□□□□ -1.76
VPS52	YDR484W	ECM23	Q02710	187 aa		4.07	□□□□□ -1.76
VPS52	YDR484W	ACS2	P52910	683 aa	Known RBP	4.07	□□□□□ -1.76
VPS52	YDR484W	GAS4	Q08271	471 aa		4.07	□□□□□ -1.76
VPS52	YDR484W	NOB1	Q08444	459 aa	Known RBP	4.07	□□□□□ -1.76
VPS52	YDR484W	BRE4	Q07660	1125 aa		4.06	□□□□□ -1.76
VPS52	YDR484W	Q0182	Q9ZZW1	134 aa		4.06	□□□□□ -1.76
VPS52	YDR484W	MCM1	P11746	286 aa		4.05	□□□□□ -1.76
VPS52	YDR484W	RSC6	P25632	483 aa		4.05	□□□□□ -1.76
VPS52	YDR484W	NTH2	P35172	780 aa		4.05	□□□□□ -1.76
VPS52	YDR484W	NCL1	P38205	684 aa	Known RBP	4.05	□□□□□ -1.76
VPS52	YDR484W	UBX7	P38349	436 aa		4.05	□□□□□ -1.76
VPS52	YDR484W	RPS6A	P0CX37	236 aa	Known RBP	4.05	□□□□□ -1.76
VPS52	YDR484W	RPS6B	P0CX38	236 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52	YDR484W	MLF3	P32047	452 aa		4.05	□□□□□ -1.76
VPS52	YDR484W	RPL34A	P87262	121 aa	Predicted RBP	4.05	□□□□□ -1.76
VPS52	YDR484W	MTO1	P53070	669 aa		4.04	□□□□□ -1.76
VPS52	YDR484W	YGR130C	P53278	816 aa		4.04	□□□□□ -1.76
VPS52	YDR484W	VAN1	P23642	535 aa		4.03	□□□□□ -1.76
VPS52	YDR484W	ROM1	P53046	1155 aa		4.03	□□□□□ -1.76
VPS52	YDR484W	PUF6	Q04373	656 aa	Known RBP	4.03	□□□□□ -1.76
VPS52	YDR484W	YML083C	Q04526	418 aa		4.03	□□□□□ -1.76
VPS52	YDR484W	CYT1	P07143	309 aa		4.03	□□□□□ -1.76
VPS52	YDR484W	GEF1	P37020	779 aa		4.03	□□□□□ -1.76
VPS52	YDR484W	CHS2	P14180	963 aa		4.02	□□□□□ -1.77
VPS52	YDR484W	NGR1	P32831	672 aa	Known RBP	4.02	□□□□□ -1.77
VPS52	YDR484W	SAF1	P38352	637 aa		4.02	□□□□□ -1.77
VPS52	YDR484W	TRS33	Q99394	268 aa		4.02	□□□□□ -1.77
VPS52	YDR484W	UBP1	P25037	809 aa		4.01	□□□□□ -1.77
VPS52	YDR484W	CWH41	P53008	833 aa		4.01	□□□□□ -1.77
VPS52	YDR484W	SKP1	P52286	194 aa		4	□□□□□ -1.77
VPS52	YDR484W	RNQ1	P25367	405 aa		3.99	□□□□□ -1.77
VPS52	YDR484W	YNR040W	P53736	256 aa		3.99	□□□□□ -1.77
VPS52	YDR484W	MAG2	Q06436	670 aa	Known RBP	3.99	□□□□□ -1.77
VPS52	YDR484W	PUN1	Q06991	263 aa		3.99	□□□□□ -1.77
VPS52	YDR484W	CYC7	P00045	113 aa		3.98	□□□□□ -1.77
VPS52	YDR484W	SRS2	P12954	1174 aa		3.98	□□□□□ -1.77
VPS52	YDR484W	CWC15	Q03772	175 aa	Known RBP	3.98	□□□□□ -1.77
VPS52	YDR484W	NAM7	P30771	971 aa	Known RBP	3.97	□□□□□ -1.77
VPS52	YDR484W	CDC3	P32457	520 aa	Known RBP	3.97	□□□□□ -1.77
VPS52	YDR484W	CUS1	Q02554	436 aa	Predicted RBP	3.97	□□□□□ -1.77
VPS52	YDR484W	TY4B-P	A0A0B7P3V8	1104 aa		3.97	□□□□□ -1.77
VPS52	YDR484W	KAP122	P32767	1081 aa		3.97	□□□□□ -1.77
VPS52	YDR484W	APM2	P38700	605 aa		3.97	□□□□□ -1.77
VPS52	YDR484W	AKR1	P39010	764 aa		3.97	□□□□□ -1.77
VPS52	YDR484W	SPO74	P45819	413 aa		3.97	□□□□□ -1.77
VPS52	YDR484W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
VPS52	YDR484W	SLP1	Q12232	587 aa		3.97	□□□□□ -1.77
VPS52	YDR484W	TY4A-H	Q6Q5P6	413 aa		3.97	□□□□□ -1.77
VPS52	YDR484W	SCD5	P34758	872 aa		3.96	□□□□□ -1.78
VPS52	YDR484W	ALD4	P46367	519 aa	Known RBP	3.96	□□□□□ -1.78
VPS52	YDR484W	MRP10	O75012	95 aa		3.95	□□□□□ -1.78
VPS52	YDR484W	YKL222C	P35995	705 aa		3.95	□□□□□ -1.78
VPS52	YDR484W	PNP1	Q05788	311 aa		3.95	□□□□□ -1.78
VPS52	YDR484W	TY1A-NL1	Q12391	440 aa	Known RBP	3.95	□□□□□ -1.78
VPS52	YDR484W	UTP4	Q06679	776 aa	Known RBP	3.95	□□□□□ -1.78
VPS52	YDR484W	SUV3	P32580	737 aa		3.94	□□□□□ -1.78
VPS52	YDR484W	RRN6	P32786	894 aa		3.94	□□□□□ -1.78
VPS52	YDR484W	TED1	P40533	473 aa		3.94	□□□□□ -1.78
VPS52	YDR484W	FUR4	P05316	633 aa	Known RBP	3.93	□□□□□ -1.78
VPS52	YDR484W	HXT5	P38695	592 aa		3.93	□□□□□ -1.78
VPS52	YDR484W	GIP2	P40036	548 aa		3.93	□□□□□ -1.78
VPS52	YDR484W	YCR015C	P25616	317 aa		3.93	□□□□□ -1.78
VPS52	YDR484W	YBR197C	P38306	217 aa		3.93	□□□□□ -1.78
VPS52	YDR484W	FOX2	Q02207	900 aa	Known RBP	3.93	□□□□□ -1.78
VPS52	YDR484W	CAB1	Q04430	367 aa		3.93	□□□□□ -1.78
VPS52	YDR484W	DSE4	P53753	1117 aa		3.92	□□□□□ -1.78
VPS52	YDR484W	KAR5	Q04746	504 aa		3.92	□□□□□ -1.78
VPS52	YDR484W	ISC10	P32645	267 aa		3.91	□□□□□ -1.78
VPS52	YDR484W	SEG2	P34250	1132 aa		3.91	□□□□□ -1.78
VPS52	YDR484W	SOK2	P53438	785 aa	Predicted RBP	3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms