RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	AIM7	Q12156	149 aa		12.07	□□□□□ -0.48
MRP20	YDR405W	ARG82	P07250	355 aa		12.06	□□□□□ -0.48
MRP20	YDR405W	GAP1	P19145	602 aa	Predicted RBP	12.06	□□□□□ -0.48
MRP20	YDR405W	FIG2	P25653	1609 aa		12.06	□□□□□ -0.48
MRP20	YDR405W	FAS2	P19097	1887 aa	Known RBP	12.06	□□□□□ -0.48
MRP20	YDR405W	VHR2	P40041	505 aa		12.05	□□□□□ -0.48
MRP20	YDR405W	GSM1	P42950	618 aa		12.05	□□□□□ -0.48
MRP20	YDR405W	SEN54	Q02825	467 aa	Predicted RBP	12.05	□□□□□ -0.48
MRP20	YDR405W	HPR1	P17629	752 aa	Known RBP	12.04	□□□□□ -0.48
MRP20	YDR405W	GLO3	P38682	493 aa	Known RBP	12.04	□□□□□ -0.48
MRP20	YDR405W	FUN12	P39730	1002 aa	Known RBP	12.04	□□□□□ -0.48
MRP20	YDR405W	PEA2	P40091	420 aa		12.04	□□□□□ -0.48
MRP20	YDR405W	YFH7	P43591	353 aa		12.04	□□□□□ -0.48
MRP20	YDR405W	VPS4	P52917	437 aa		12.04	□□□□□ -0.48
MRP20	YDR405W	ILV3	P39522	585 aa	Known RBP	12.03	□□□□□ -0.48
MRP20	YDR405W	TOS4	Q06266	489 aa		12.03	□□□□□ -0.48
MRP20	YDR405W	RRI2	Q12348	645 aa		12.03	□□□□□ -0.48
MRP20	YDR405W	TYW1	Q08960	810 aa	Known RBP	12.02	□□□□□ -0.49
MRP20	YDR405W	NMD2	P38798	1089 aa	Known RBP	12.01	□□□□□ -0.49
MRP20	YDR405W	HAL5	P38970	855 aa	Known RBP	12.01	□□□□□ -0.49
MRP20	YDR405W	CWC15	Q03772	175 aa	Known RBP	12.01	□□□□□ -0.49
MRP20	YDR405W	AI2	P03876	854 aa		12	□□□□□ -0.49
MRP20	YDR405W	RPS7A	P26786	190 aa	Known RBP	12	□□□□□ -0.49
MRP20	YDR405W	SLA1	P32790	1244 aa		12	□□□□□ -0.49
MRP20	YDR405W	STV1	P37296	890 aa		12	□□□□□ -0.49
MRP20	YDR405W	FPR3	P38911	411 aa	Known RBP	12	□□□□□ -0.49
MRP20	YDR405W	YGL242C	P53066	181 aa		12	□□□□□ -0.49
MRP20	YDR405W	YNL193W	P53870	558 aa		12	□□□□□ -0.49
MRP20	YDR405W	FLO11	P08640	1367 aa		12	□□□□□ -0.49
MRP20	YDR405W	RPN7	Q06103	429 aa	Known RBP	11.99	□□□□□ -0.49
MRP20	YDR405W	CYB2	P00175	591 aa		11.98	□□□□□ -0.49
MRP20	YDR405W	YIL089W	P40500	205 aa		11.98	□□□□□ -0.49
MRP20	YDR405W	YJL171C	P46992	396 aa		11.98	□□□□□ -0.49
MRP20	YDR405W	MLC1	P53141	149 aa		11.98	□□□□□ -0.49
MRP20	YDR405W	PUS6	P53294	404 aa		11.98	□□□□□ -0.49
MRP20	YDR405W	AAD16	Q02895	342 aa		11.98	□□□□□ -0.49
MRP20	YDR405W	RPT3	P33298	428 aa	Known RBP	11.97	□□□□□ -0.49
MRP20	YDR405W	NPL4	P33755	580 aa		11.97	□□□□□ -0.49
MRP20	YDR405W	UTP7	P40055	554 aa	Known RBP	11.97	□□□□□ -0.49
MRP20	YDR405W	APL6	P46682	809 aa		11.97	□□□□□ -0.49
MRP20	YDR405W	INM2	Q05533	292 aa		11.97	□□□□□ -0.49
MRP20	YDR405W	GEF1	P37020	779 aa		11.96	□□□□□ -0.49
MRP20	YDR405W	RRD1	P40454	393 aa	Known RBP	11.96	□□□□□ -0.49
MRP20	YDR405W	BDP1	P46678	594 aa		11.96	□□□□□ -0.49
MRP20	YDR405W	MTC3	P53077	123 aa		11.96	□□□□□ -0.49
MRP20	YDR405W	NOT3	P06102	836 aa	Known RBP	11.95	□□□□□ -0.5
MRP20	YDR405W	CBP1	P07252	654 aa		11.95	□□□□□ -0.5
MRP20	YDR405W	PTK1	P36002	662 aa	Predicted RBP	11.95	□□□□□ -0.5
MRP20	YDR405W	YIR042C	P40586	236 aa		11.95	□□□□□ -0.5
MRP20	YDR405W	ECM16	Q04217	1267 aa	Known RBP	11.95	□□□□□ -0.5
MRP20	YDR405W	PDR18	P53756	1333 aa		11.94	□□□□□ -0.5
MRP20	YDR405W	RRT6	P53117	311 aa	Predicted RBP	11.94	□□□□□ -0.5
MRP20	YDR405W	DUR1,2	P32528	1835 aa	Known RBP	11.93	□□□□□ -0.5
MRP20	YDR405W	SNF3	P10870	884 aa		11.93	□□□□□ -0.5
MRP20	YDR405W	ECM21	P38167	1117 aa	Known RBP	11.93	□□□□□ -0.5
MRP20	YDR405W	NIT1	P40447	199 aa		11.93	□□□□□ -0.5
MRP20	YDR405W	CDC16	P09798	840 aa		11.92	□□□□□ -0.5
MRP20	YDR405W	GAL2	P13181	574 aa		11.92	□□□□□ -0.5
MRP20	YDR405W	MDL2	P33311	773 aa		11.92	□□□□□ -0.5
MRP20	YDR405W	BOI1	P38041	980 aa	Known RBP	11.92	□□□□□ -0.5
MRP20	YDR405W	KTR3	P38130	404 aa	Predicted RBP	11.92	□□□□□ -0.5
MRP20	YDR405W	ALO1	P54783	526 aa	Known RBP	11.92	□□□□□ -0.5
MRP20	YDR405W	ETP1	P38748	585 aa	Known RBP	11.91	□□□□□ -0.5
MRP20	YDR405W	RFC1	P38630	861 aa	Known RBP	11.9	□□□□□ -0.5
MRP20	YDR405W	OSH3	P38713	996 aa	Known RBP	11.9	□□□□□ -0.5
MRP20	YDR405W	BSD2	P38356	321 aa		11.89	□□□□□ -0.51
MRP20	YDR405W	PIP2	P52960	996 aa		11.89	□□□□□ -0.51
MRP20	YDR405W	BRE1	Q07457	700 aa	Known RBP	11.89	□□□□□ -0.51
MRP20	YDR405W	CSR2	Q12734	1121 aa		11.89	□□□□□ -0.51
MRP20	YDR405W	MSH4	P40965	878 aa	Predicted RBP	11.88	□□□□□ -0.51
MRP20	YDR405W	IOC3	P43596	787 aa		11.88	□□□□□ -0.51
MRP20	YDR405W	ENP2	P48234	707 aa	Known RBP	11.88	□□□□□ -0.51
MRP20	YDR405W	GRX7	P38068	203 aa		11.87	□□□□□ -0.51
MRP20	YDR405W	EPS1	P40557	701 aa		11.87	□□□□□ -0.51
MRP20	YDR405W	PCL8	Q08966	492 aa		11.87	□□□□□ -0.51
MRP20	YDR405W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.86	□□□□□ -0.51	not detected
MRP20	YDR405W	HVG1	P0CE11	249 aa		11.85	□□□□□ -0.51
MRP20	YDR405W	RAD53	P22216	821 aa		11.85	□□□□□ -0.51
MRP20	YDR405W	PBY1	P38254	753 aa		11.85	□□□□□ -0.51
MRP20	YDR405W	TPS3	P38426	1054 aa	Known RBP	11.85	□□□□□ -0.51
MRP20	YDR405W	IRC8	P47046	822 aa		11.85	□□□□□ -0.51
MRP20	YDR405W	DUS1	P53759	423 aa	Known RBP	11.84	□□□□□ -0.51
MRP20	YDR405W	NKP2	Q06162	153 aa		11.84	□□□□□ -0.51
MRP20	YDR405W	ADP1	P25371	1049 aa		11.83	□□□□□ -0.52
MRP20	YDR405W	KTR1	P27810	393 aa	Known RBP	11.83	□□□□□ -0.52
MRP20	YDR405W	MRPS35	P53292	345 aa		11.83	□□□□□ -0.52
MRP20	YDR405W	TIF6	Q12522	245 aa	Known RBP	11.83	□□□□□ -0.52
MRP20	YDR405W	PMA1	P05030	918 aa	Known RBP	11.82	□□□□□ -0.52
MRP20	YDR405W	OPI1	P21957	404 aa		11.82	□□□□□ -0.52
MRP20	YDR405W	PNT1	P38969	423 aa		11.82	□□□□□ -0.52
MRP20	YDR405W	CST9	Q06032	482 aa		11.82	□□□□□ -0.52
MRP20	YDR405W	RAD50	P12753	1312 aa		11.82	□□□□□ -0.52
MRP20	YDR405W	KEL1	P38853	1164 aa	Known RBP	11.81	□□□□□ -0.52
MRP20	YDR405W	YMR147W	P40218	223 aa	Known RBP	11.81	□□□□□ -0.52
MRP20	YDR405W	BBC1	P47068	1157 aa		11.81	□□□□□ -0.52
MRP20	YDR405W	SNU71	P53207	620 aa	Known RBP	11.81	□□□□□ -0.52
MRP20	YDR405W	NSG2	P53898	299 aa		11.81	□□□□□ -0.52
MRP20	YDR405W	KAR5	Q04746	504 aa		11.81	□□□□□ -0.52
MRP20	YDR405W	TAH18	Q12181	623 aa		11.81	□□□□□ -0.52
MRP20	YDR405W	SRF1	Q12516	437 aa		11.81	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms