RNA–Protein interactions for RNA: YDR323C

PEP7, Transcript of Adaptor protein involved in vesicle-mediated vacuolar protein sorting, yeast

Gene PEP7, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP7	YDR323C	STM1	P39015	273 aa	Known RBP	4.94	□□□□□ -1.62
PEP7	YDR323C	FUR4	P05316	633 aa	Known RBP	4.93	□□□□□ -1.62
PEP7	YDR323C	RPS6A	P0CX37	236 aa	Known RBP	4.93	□□□□□ -1.62
PEP7	YDR323C	RPS6B	P0CX38	236 aa	Predicted RBP	4.93	□□□□□ -1.62
PEP7	YDR323C	ERP5	P38819	212 aa		4.93	□□□□□ -1.62
PEP7	YDR323C	OSW7	P43611	510 aa		4.93	□□□□□ -1.62
PEP7	YDR323C	CWH41	P53008	833 aa		4.93	□□□□□ -1.62
PEP7	YDR323C	FAR11	P53917	953 aa		4.93	□□□□□ -1.62
PEP7	YDR323C	SEN54	Q02825	467 aa	Predicted RBP	4.93	□□□□□ -1.62
PEP7	YDR323C	YTA7	P40340	1379 aa		4.93	□□□□□ -1.62
PEP7	YDR323C	CYT1	P07143	309 aa		4.92	□□□□□ -1.62
PEP7	YDR323C	HEM3	P28789	327 aa		4.92	□□□□□ -1.62
PEP7	YDR323C	SPC42	P36094	363 aa		4.92	□□□□□ -1.62
PEP7	YDR323C	ALA1	P40825	983 aa	Known RBP	4.92	□□□□□ -1.62
PEP7	YDR323C	JJJ2	P46997	583 aa		4.92	□□□□□ -1.62
PEP7	YDR323C	SWI5	P08153	709 aa		4.92	□□□□□ -1.62
PEP7	YDR323C	UBP1	P25037	809 aa		4.92	□□□□□ -1.62
PEP7	YDR323C	SEC20	P28791	383 aa		4.91	□□□□□ -1.62
PEP7	YDR323C	IRE1	P32361	1115 aa		4.91	□□□□□ -1.62
PEP7	YDR323C	RRN6	P32786	894 aa		4.91	□□□□□ -1.62
PEP7	YDR323C	ALD4	P46367	519 aa	Known RBP	4.91	□□□□□ -1.62
PEP7	YDR323C	TPO2	P53283	614 aa		4.91	□□□□□ -1.62
PEP7	YDR323C	GRS1	P38088	690 aa	Known RBP	4.9	□□□□□ -1.63
PEP7	YDR323C	BOL3	P39724	118 aa		4.9	□□□□□ -1.63
PEP7	YDR323C	DOS2	P54858	310 aa		4.9	□□□□□ -1.63
PEP7	YDR323C	BUD21	Q08492	214 aa	Predicted RBP	4.9	□□□□□ -1.63
PEP7	YDR323C	YPR053C	Q6Q5F3	151 aa		4.9	□□□□□ -1.63
PEP7	YDR323C	TRL1	P09880	827 aa	Known RBP	4.89	□□□□□ -1.63
PEP7	YDR323C	NGR1	P32831	672 aa	Known RBP	4.89	□□□□□ -1.63
PEP7	YDR323C	SHM1	P37292	490 aa	Predicted RBP	4.89	□□□□□ -1.63
PEP7	YDR323C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PEP7	YDR323C	CCT8	P47079	568 aa	Known RBP	4.89	□□□□□ -1.63
PEP7	YDR323C	ATG1	P53104	897 aa		4.89	□□□□□ -1.63
PEP7	YDR323C	HIF1	Q12373	385 aa		4.89	□□□□□ -1.63
PEP7	YDR323C	SUV3	P32580	737 aa		4.88	□□□□□ -1.63
PEP7	YDR323C	TOA1	P32773	286 aa		4.88	□□□□□ -1.63
PEP7	YDR323C	PAM1	P37304	830 aa	Known RBP	4.88	□□□□□ -1.63
PEP7	YDR323C	MDJ2	P42834	146 aa		4.88	□□□□□ -1.63
PEP7	YDR323C	GLO3	P38682	493 aa	Known RBP	4.87	□□□□□ -1.63
PEP7	YDR323C	YHL050C	P38721	697 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	YHR219W	P38900	624 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	IPL1	P38991	367 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	SBE2	P42223	864 aa	Known RBP	4.87	□□□□□ -1.63
PEP7	YDR323C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PEP7	YDR323C	YPQ2	Q06328	317 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	MSC6	Q08818	692 aa	Known RBP	4.87	□□□□□ -1.63
PEP7	YDR323C	FPS1	P23900	669 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	PDC6	P26263	563 aa	Known RBP	4.87	□□□□□ -1.63
PEP7	YDR323C	QDR1	P40475	563 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	ACF4	P47129	309 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	TDA6	Q06466	467 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	PSH1	Q12161	406 aa		4.87	□□□□□ -1.63
PEP7	YDR323C	GPM1	P00950	247 aa	Known RBP	4.86	□□□□□ -1.63
PEP7	YDR323C	YBR197C	P38306	217 aa		4.86	□□□□□ -1.63
PEP7	YDR323C	SKN7	P38889	622 aa		4.86	□□□□□ -1.63
PEP7	YDR323C	CWC22	P53333	577 aa	Known RBP	4.86	□□□□□ -1.63
PEP7	YDR323C	LSO1	Q3E827	93 aa		4.86	□□□□□ -1.63
PEP7	YDR323C	MRPL16	P38064	232 aa		4.85	□□□□□ -1.63
PEP7	YDR323C	FOX2	Q02207	900 aa	Known RBP	4.85	□□□□□ -1.63
PEP7	YDR323C	RPS31	P05759	152 aa	Known RBP	4.84	□□□□□ -1.63
PEP7	YDR323C	ISC10	P32645	267 aa		4.84	□□□□□ -1.63
PEP7	YDR323C	YNR014W	P53719	212 aa		4.84	□□□□□ -1.63
PEP7	YDR323C	YMR187C	Q03236	431 aa		4.84	□□□□□ -1.63
PEP7	YDR323C	MCM1	P11746	286 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	MCX1	P38323	520 aa	Predicted RBP	4.83	□□□□□ -1.64
PEP7	YDR323C	PPX1	P38698	397 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	THI12	P42883	340 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	THI5	P43534	340 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	THI11	P47183	340 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	KIP3	P53086	805 aa	Known RBP	4.83	□□□□□ -1.64
PEP7	YDR323C	CAB1	Q04430	367 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	THI13	Q07748	340 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	STB3	Q12427	513 aa		4.83	□□□□□ -1.64
PEP7	YDR323C	SPR3	P41901	512 aa		4.82	□□□□□ -1.64
PEP7	YDR323C	ZDS1	P50111	915 aa	Known RBP	4.82	□□□□□ -1.64
PEP7	YDR323C	NUT2	Q06213	157 aa		4.82	□□□□□ -1.64
PEP7	YDR323C	RPP1A	P05318	106 aa	Predicted RBP	4.82	□□□□□ -1.64
PEP7	YDR323C	LEU1	P07264	779 aa	Known RBP	4.82	□□□□□ -1.64
PEP7	YDR323C	KNS1	P32350	737 aa	Predicted RBP	4.82	□□□□□ -1.64
PEP7	YDR323C	SCD5	P34758	872 aa		4.82	□□□□□ -1.64
PEP7	YDR323C	BOI1	P38041	980 aa	Known RBP	4.82	□□□□□ -1.64
PEP7	YDR323C	YAF9	P53930	226 aa		4.82	□□□□□ -1.64
PEP7	YDR323C	PDC5	P16467	563 aa	Known RBP	4.81	□□□□□ -1.64
PEP7	YDR323C	CAB3	P36076	571 aa		4.81	□□□□□ -1.64
PEP7	YDR323C	MET1	P36150	593 aa		4.81	□□□□□ -1.64
PEP7	YDR323C	HXT5	P38695	592 aa		4.81	□□□□□ -1.64
PEP7	YDR323C	OCA5	P38738	679 aa		4.81	□□□□□ -1.64
PEP7	YDR323C	BOI2	P39969	1040 aa		4.81	□□□□□ -1.64
PEP7	YDR323C	POL32	P47110	350 aa		4.81	□□□□□ -1.64
PEP7	YDR323C	FRT1	Q99332	602 aa		4.81	□□□□□ -1.64
PEP7	YDR323C	TY1A-DR2	Q03964	440 aa	Known RBP	4.8	□□□□□ -1.64
PEP7	YDR323C	FPR4	Q06205	392 aa	Predicted RBP	4.8	□□□□□ -1.64
PEP7	YDR323C	WHI5	Q12416	295 aa		4.8	□□□□□ -1.64
PEP7	YDR323C	MRPL33	P20084	86 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	YTA6	P40328	754 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	AIM21	P40563	679 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	TY4A-J	P47023	414 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	ALD2	P47771	506 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	UFD2	P54860	961 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	TRS120	Q04183	1289 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms