RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C UBP12P39538 1254 aa7.6□□□□□ -1.19
MSS116YDR194C TPO2P53283 614 aa7.6□□□□□ -1.19
MSS116YDR194C YNL035CP53962 389 aaKnown RBP7.6□□□□□ -1.19
MSS116YDR194C ELP4Q02884 456 aaKnown RBP7.6□□□□□ -1.19
MSS116YDR194C NOC3Q07896 663 aaPredicted RBP7.6□□□□□ -1.19
MSS116YDR194C YOL057WQ08225 711 aa7.6□□□□□ -1.19
MSS116YDR194C RAD4P14736 754 aa7.59□□□□□ -1.19
MSS116YDR194C TIM23P32897 222 aa7.59□□□□□ -1.19
MSS116YDR194C HXT5P38695 592 aa7.59□□□□□ -1.19
MSS116YDR194C RRN7P40992 514 aa7.59□□□□□ -1.19
MSS116YDR194C YRB30P53107 440 aaPredicted RBP7.59□□□□□ -1.19
MSS116YDR194C RSC4Q02206 625 aa7.59□□□□□ -1.2
MSS116YDR194C UTP14Q04500 899 aaKnown RBP7.59□□□□□ -1.2
MSS116YDR194C URN1Q06525 465 aaKnown RBP7.59□□□□□ -1.2
MSS116YDR194C MRPL33P20084 86 aa7.58□□□□□ -1.2
MSS116YDR194C CDC34P14682 295 aa7.57□□□□□ -1.2
MSS116YDR194C PRI2P20457 528 aa7.57□□□□□ -1.2
MSS116YDR194C PMC1P38929 1173 aaPredicted RBP7.57□□□□□ -1.2
MSS116YDR194C HAP5Q02516 242 aa7.57□□□□□ -1.2
MSS116YDR194C IOC2Q12072 812 aa7.57□□□□□ -1.2
MSS116YDR194C MSH4P40965 878 aaPredicted RBP7.57□□□□□ -1.2
MSS116YDR194C TDA5Q06417 326 aaKnown RBP7.57□□□□□ -1.2
MSS116YDR194C PHO8P11491 566 aa7.56□□□□□ -1.2
MSS116YDR194C UTR2P32623 467 aa7.56□□□□□ -1.2
MSS116YDR194C YHR020WP38708 688 aaKnown RBP7.56□□□□□ -1.2
MSS116YDR194C YHL008CP38750 627 aa7.56□□□□□ -1.2
MSS116YDR194C SPF1P39986 1215 aaKnown RBP7.56□□□□□ -1.2
MSS116YDR194C TIM54P47045 478 aa7.56□□□□□ -1.2
MSS116YDR194C NAN1Q02931 896 aaKnown RBP7.56□□□□□ -1.2
MSS116YDR194C BSC2Q05611 235 aa7.56□□□□□ -1.2
MSS116YDR194C PRE9P23638 258 aaKnown RBP7.55□□□□□ -1.2
MSS116YDR194C SMC1P32908 1225 aa7.55□□□□□ -1.2
MSS116YDR194C DUT1P33317 147 aa7.55□□□□□ -1.2
MSS116YDR194C YGR053CP53234 283 aa7.55□□□□□ -1.2
MSS116YDR194C OPI10Q08202 246 aa7.55□□□□□ -1.2
MSS116YDR194C MOD5P07884 428 aa7.55□□□□□ -1.2
MSS116YDR194C TIF11P38912 153 aaKnown RBP7.55□□□□□ -1.2
MSS116YDR194C YEN1P40028 759 aa7.55□□□□□ -1.2
MSS116YDR194C MRPS18P42847 217 aa7.55□□□□□ -1.2
MSS116YDR194C DAL4Q04895 635 aa7.55□□□□□ -1.2
MSS116YDR194C MCD1Q12158 566 aa7.54□□□□□ -1.2
MSS116YDR194C PRT1P06103 763 aaKnown RBP7.53□□□□□ -1.2
MSS116YDR194C YKL069WP36088 180 aa7.53□□□□□ -1.2
MSS116YDR194C HXT8P40886 569 aa7.53□□□□□ -1.2
MSS116YDR194C NOP2P40991 618 aaKnown RBP7.53□□□□□ -1.2
MSS116YDR194C VNX1P42839 908 aa7.53□□□□□ -1.2
MSS116YDR194C TYW3P53177 273 aa7.53□□□□□ -1.2
MSS116YDR194C ISU1Q03020 165 aa7.53□□□□□ -1.2
MSS116YDR194C YLR125WQ12138 136 aa7.53□□□□□ -1.2
MSS116YDR194C PAT1P25644 796 aaKnown RBP7.53□□□□□ -1.2
MSS116YDR194C CHZ1P40019 153 aaPredicted RBP7.53□□□□□ -1.2
MSS116YDR194C EMW1P42842 904 aaKnown RBP7.52□□□□□ -1.21
MSS116YDR194C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
MSS116YDR194C APP1P53933 587 aa7.51□□□□□ -1.21
MSS116YDR194C YPQ2Q06328 317 aa7.51□□□□□ -1.21
MSS116YDR194C INP54Q08227 384 aaKnown RBP7.51□□□□□ -1.21
MSS116YDR194C YBL029C-AQ3E756 94 aa7.51□□□□□ -1.21
MSS116YDR194C VMA3P25515 160 aa7.51□□□□□ -1.21
MSS116YDR194C ENP1P38333 483 aaKnown RBP7.51□□□□□ -1.21
MSS116YDR194C DNM1P54861 757 aa7.51□□□□□ -1.21
MSS116YDR194C FLC1Q08967 793 aa7.51□□□□□ -1.21
MSS116YDR194C SEC61P32915 480 aa7.5□□□□□ -1.21
MSS116YDR194C PRP40P33203 583 aaKnown RBP7.5□□□□□ -1.21
MSS116YDR194C ARH1P48360 493 aa7.5□□□□□ -1.21
MSS116YDR194C YPR015CQ12531 247 aa7.5□□□□□ -1.21
MSS116YDR194C MCM1P11746 286 aa7.5□□□□□ -1.21
MSS116YDR194C DAT1P13483 248 aaKnown RBP7.5□□□□□ -1.21
MSS116YDR194C SRM1P21827 482 aa7.5□□□□□ -1.21
MSS116YDR194C KIP2P28743 706 aa7.5□□□□□ -1.21
MSS116YDR194C THI4P32318 326 aa7.5□□□□□ -1.21
MSS116YDR194C SCD5P34758 872 aa7.5□□□□□ -1.21
MSS116YDR194C CRP1P38845 465 aaKnown RBP7.5□□□□□ -1.21
MSS116YDR194C NAB3P38996 802 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
MSS116YDR194C RSP5P39940 809 aaKnown RBP7.5□□□□□ -1.21
MSS116YDR194C YCS4Q06156 1176 aa7.5□□□□□ -1.21
MSS116YDR194C FBP26P32604 452 aa7.49□□□□□ -1.21
MSS116YDR194C RTG1P32607 177 aa7.49□□□□□ -1.21
MSS116YDR194C TBS1P38114 1094 aa7.49□□□□□ -1.21
MSS116YDR194C YPL109CQ02981 657 aa7.49□□□□□ -1.21
MSS116YDR194C YDR344CQ05510 147 aa7.49□□□□□ -1.21
MSS116YDR194C CCP1P00431 361 aa7.48□□□□□ -1.21
MSS116YDR194C ERR1P0CX10 437 aa7.48□□□□□ -1.21
MSS116YDR194C ERR2P0CX11 437 aa7.48□□□□□ -1.21
MSS116YDR194C GRX7P38068 203 aa7.48□□□□□ -1.21
MSS116YDR194C RAD55P38953 406 aa7.48□□□□□ -1.21
MSS116YDR194C BNI4P53858 892 aa7.48□□□□□ -1.21
MSS116YDR194C UGA4P32837 571 aa7.48□□□□□ -1.21
MSS116YDR194C YDL129WQ07555 291 aa7.48□□□□□ -1.21
MSS116YDR194C NOP14Q99207 810 aaKnown RBP7.48□□□□□ -1.21
MSS116YDR194C MCM5P29496 775 aaKnown RBP7.47□□□□□ -1.21
MSS116YDR194C NTA1P40354 457 aa7.47□□□□□ -1.21
MSS116YDR194C RGD2P43556 714 aa7.47□□□□□ -1.21
MSS116YDR194C YJR115WP47152 169 aa7.47□□□□□ -1.21
MSS116YDR194C FAL1Q12099 399 aaKnown RBP7.47□□□□□ -1.21
MSS116YDR194C SPT16P32558 1035 aaKnown RBP7.46□□□□□ -1.21
MSS116YDR194C WTM2Q12206 467 aa7.46□□□□□ -1.21
MSS116YDR194C FLP1P03870 423 aa7.46□□□□□ -1.22
MSS116YDR194C STE5P32917 917 aa7.46□□□□□ -1.22
MSS116YDR194C PIC2P40035 300 aa7.46□□□□□ -1.22
MSS116YDR194C GIN4Q12263 1142 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms