RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A NAB2P32505 525 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
YDR170W-AYDR170W-A TIF1P10081 395 aaKnown RBP6□□□□□ -1.45
YDR170W-AYDR170W-A YDJ1P25491 409 aaKnown RBP5.99□□□□□ -1.45
YDR170W-AYDR170W-A BRE4Q07660 1125 aa5.99□□□□□ -1.45
YDR170W-AYDR170W-A CBC2Q08920 208 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
YDR170W-AYDR170W-A UBP5P39944 805 aa5.99□□□□□ -1.45
YDR170W-AYDR170W-A MCM1P11746 286 aa5.98□□□□□ -1.45
YDR170W-AYDR170W-A SUP45P12385 437 aaKnown RBP5.98□□□□□ -1.45
YDR170W-AYDR170W-A RTG2P32608 588 aaKnown RBP5.98□□□□□ -1.45
YDR170W-AYDR170W-A MLF3P32047 452 aa5.97□□□□□ -1.45
YDR170W-AYDR170W-A ENO2P00925 437 aaKnown RBP5.96□□□□□ -1.46
YDR170W-AYDR170W-A NCL1P38205 684 aaKnown RBP5.94□□□□□ -1.46
YDR170W-AYDR170W-A YGR130CP53278 816 aa5.94□□□□□ -1.46
YDR170W-AYDR170W-A MAG2Q06436 670 aaKnown RBP5.94□□□□□ -1.46
YDR170W-AYDR170W-A SAF1P38352 637 aa5.93□□□□□ -1.46
YDR170W-AYDR170W-A AIM9P40053 627 aaKnown RBP5.93□□□□□ -1.46
YDR170W-AYDR170W-A CHS2P14180 963 aa5.92□□□□□ -1.46
YDR170W-AYDR170W-A RSC6P25632 483 aa5.92□□□□□ -1.46
YDR170W-AYDR170W-A NGR1P32831 672 aaKnown RBP5.92□□□□□ -1.46
YDR170W-AYDR170W-A Q0182Q9ZZW1 134 aa5.92□□□□□ -1.46
YDR170W-AYDR170W-A ENO1P00924 437 aaKnown RBP5.91□□□□□ -1.46
YDR170W-AYDR170W-A RPS6AP0CX37 236 aaKnown RBP5.91□□□□□ -1.46
YDR170W-AYDR170W-A RPS6BP0CX38 236 aaPredicted RBP5.91□□□□□ -1.46
YDR170W-AYDR170W-A RNQ1P25367 405 aa5.91□□□□□ -1.46
YDR170W-AYDR170W-A YPP1P46951 817 aa5.91□□□□□ -1.46
YDR170W-AYDR170W-A SKP1P52286 194 aa5.91□□□□□ -1.46
YDR170W-AYDR170W-A RIM21P48565 533 aa5.9□□□□□ -1.47
YDR170W-AYDR170W-A MRX10Q05648 414 aa5.9□□□□□ -1.47
YDR170W-AYDR170W-A MTO1P53070 669 aa5.89□□□□□ -1.47
YDR170W-AYDR170W-A TTI1P36097 1038 aa5.88□□□□□ -1.47
YDR170W-AYDR170W-A SLP1Q12232 587 aa5.88□□□□□ -1.47
YDR170W-AYDR170W-A CPS1P27614 576 aa5.87□□□□□ -1.47
YDR170W-AYDR170W-A SSA4P22202 642 aaKnown RBP5.86□□□□□ -1.47
YDR170W-AYDR170W-A CYC7P00045 113 aa5.85□□□□□ -1.47
YDR170W-AYDR170W-A YCR015CP25616 317 aa5.85□□□□□ -1.47
YDR170W-AYDR170W-A CUS1Q02554 436 aaPredicted RBP5.85□□□□□ -1.47
YDR170W-AYDR170W-A GIS1Q03833 894 aa5.85□□□□□ -1.47
YDR170W-AYDR170W-A SUB2Q07478 446 aaKnown RBP5.85□□□□□ -1.47
YDR170W-AYDR170W-A RDS2P19541 446 aaKnown RBP5.84□□□□□ -1.47
YDR170W-AYDR170W-A YFL034WP43564 1073 aa5.84□□□□□ -1.47
YDR170W-AYDR170W-A SPO74P45819 413 aa5.84□□□□□ -1.47
YDR170W-AYDR170W-A TY1A-NL1Q12391 440 aaKnown RBP5.84□□□□□ -1.47
YDR170W-AYDR170W-A MRP10O75012 95 aa5.83□□□□□ -1.48
YDR170W-AYDR170W-A NTH2P35172 780 aa5.83□□□□□ -1.48
YDR170W-AYDR170W-A YKL222CP35995 705 aa5.83□□□□□ -1.48
YDR170W-AYDR170W-A AKR1P39010 764 aa5.83□□□□□ -1.48
YDR170W-AYDR170W-A YNR040WP53736 256 aa5.83□□□□□ -1.48
YDR170W-AYDR170W-A PUF3Q07807 879 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
YDR170W-AYDR170W-A SIS2P36024 562 aa5.82□□□□□ -1.48
YDR170W-AYDR170W-A APM2P38700 605 aa5.82□□□□□ -1.48
YDR170W-AYDR170W-A NAM7P30771 971 aaKnown RBP5.81□□□□□ -1.48
YDR170W-AYDR170W-A PEP12P32854 288 aa5.81□□□□□ -1.48
YDR170W-AYDR170W-A TY4B-PA0A0B7P3V8 1104 aa5.8□□□□□ -1.48
YDR170W-AYDR170W-A KTR7P40504 517 aa5.8□□□□□ -1.48
YDR170W-AYDR170W-A UTP4Q06679 776 aaKnown RBP5.8□□□□□ -1.48
YDR170W-AYDR170W-A TY4A-HQ6Q5P6 413 aa5.8□□□□□ -1.48
YDR170W-AYDR170W-A SEG2P34250 1132 aa5.79□□□□□ -1.48
YDR170W-AYDR170W-A TGL4P36165 910 aa5.78□□□□□ -1.48
YDR170W-AYDR170W-A SSA1P10591 642 aaKnown RBP5.77□□□□□ -1.49
YDR170W-AYDR170W-A IDI1P15496 288 aa5.77□□□□□ -1.49
YDR170W-AYDR170W-A PUP1P25043 261 aa5.77□□□□□ -1.49
YDR170W-AYDR170W-A KAP122P32767 1081 aa5.77□□□□□ -1.49
YDR170W-AYDR170W-A NIT1P40447 199 aa5.77□□□□□ -1.49
YDR170W-AYDR170W-A TED1P40533 473 aa5.77□□□□□ -1.49
YDR170W-AYDR170W-A NOB1Q08444 459 aaKnown RBP5.77□□□□□ -1.49
YDR170W-AYDR170W-A REC8Q12188 680 aa5.77□□□□□ -1.49
YDR170W-AYDR170W-A SEA4P38164 1038 aa5.76□□□□□ -1.49
YDR170W-AYDR170W-A LRG1P35688 1017 aa5.75□□□□□ -1.49
YDR170W-AYDR170W-A YML083CQ04526 418 aa5.75□□□□□ -1.49
YDR170W-AYDR170W-A RPC31P17890 251 aa5.74□□□□□ -1.49
YDR170W-AYDR170W-A GIP2P40036 548 aa5.74□□□□□ -1.49
YDR170W-AYDR170W-A DSE4P53753 1117 aa5.74□□□□□ -1.49
YDR170W-AYDR170W-A ECM23Q02710 187 aa5.74□□□□□ -1.49
YDR170W-AYDR170W-A CYT1P07143 309 aa5.74□□□□□ -1.49
YDR170W-AYDR170W-A GAL2P13181 574 aa5.74□□□□□ -1.49
YDR170W-AYDR170W-A PDI1P17967 522 aaKnown RBP5.73□□□□□ -1.49
YDR170W-AYDR170W-A GEF1P37020 779 aa5.73□□□□□ -1.49
YDR170W-AYDR170W-A ESC8Q08119 714 aa5.73□□□□□ -1.49
YDR170W-AYDR170W-A MSB1P21339 1137 aaKnown RBP5.72□□□□□ -1.49
YDR170W-AYDR170W-A YER156CP40093 338 aaKnown RBP5.72□□□□□ -1.49
YDR170W-AYDR170W-A PHO87P25360 923 aa5.71□□□□□ -1.5
YDR170W-AYDR170W-A SCD5P34758 872 aa5.71□□□□□ -1.5
YDR170W-AYDR170W-A ECL1P48235 211 aa5.71□□□□□ -1.5
YDR170W-AYDR170W-A RPL34AP87262 121 aaPredicted RBP5.71□□□□□ -1.5
YDR170W-AYDR170W-A TSC13Q99190 310 aa5.71□□□□□ -1.5
YDR170W-AYDR170W-A UBX7P38349 436 aa5.7□□□□□ -1.5
YDR170W-AYDR170W-A ACS2P52910 683 aaKnown RBP5.7□□□□□ -1.5
YDR170W-AYDR170W-A SOK2P53438 785 aaPredicted RBP5.7□□□□□ -1.5
YDR170W-AYDR170W-A SDH1Q00711 640 aa5.7□□□□□ -1.5
YDR170W-AYDR170W-A HAP4P14064 554 aa5.69□□□□□ -1.5
YDR170W-AYDR170W-A POL12P38121 705 aaPredicted RBP5.69□□□□□ -1.5
YDR170W-AYDR170W-A ITC1P53125 1264 aa5.68□□□□□ -1.5
YDR170W-AYDR170W-A TAF1P46677 1066 aa5.67□□□□□ -1.5
YDR170W-AYDR170W-A PRP43P53131 767 aaKnown RBP5.67□□□□□ -1.5
YDR170W-AYDR170W-A HXT5P38695 592 aa5.66□□□□□ -1.5
YDR170W-AYDR170W-A ROM1P53046 1155 aa5.66□□□□□ -1.5
YDR170W-AYDR170W-A GAS4Q08271 471 aa5.66□□□□□ -1.5
YDR170W-AYDR170W-A GIP4P39732 760 aa5.65□□□□□ -1.51
YDR170W-AYDR170W-A DFG16Q99234 619 aa5.65□□□□□ -1.51
YDR170W-AYDR170W-A QDR2P40474 542 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms