RNA–Protein interactions for RNA: YDR115W

YDR115W, Transcript of Putative mitochondrial ribosomal protein of the large subunit, yeast

Gene YDR115W, Length 318 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR115W	YDR115W	SPR3	P41901	512 aa		5.02	□□□□□ -1.61
YDR115W	YDR115W	KRE33	P53914	1056 aa	Known RBP	5.02	□□□□□ -1.61
YDR115W	YDR115W	DPH6	Q12429	685 aa		5.02	□□□□□ -1.61
YDR115W	YDR115W	FPS1	P23900	669 aa		5.01	□□□□□ -1.61
YDR115W	YDR115W	SSF1	P38789	453 aa	Predicted RBP	5.01	□□□□□ -1.61
YDR115W	YDR115W	JJJ3	P47138	172 aa		5.01	□□□□□ -1.61
YDR115W	YDR115W	YGR035C	P53222	116 aa		5.01	□□□□□ -1.61
YDR115W	YDR115W	HAT1	Q12341	374 aa		5.01	□□□□□ -1.61
YDR115W	YDR115W	BOI1	P38041	980 aa	Known RBP	5	□□□□□ -1.61
YDR115W	YDR115W	NCL1	P38205	684 aa	Known RBP	5	□□□□□ -1.61
YDR115W	YDR115W	GIP1	P38229	639 aa		5	□□□□□ -1.61
YDR115W	YDR115W	GLO3	P38682	493 aa	Known RBP	5	□□□□□ -1.61
YDR115W	YDR115W	ACF4	P47129	309 aa		5	□□□□□ -1.61
YDR115W	YDR115W	CUS1	Q02554	436 aa	Predicted RBP	5	□□□□□ -1.61
YDR115W	YDR115W	HEH2	Q03281	663 aa		5	□□□□□ -1.61
YDR115W	YDR115W	HPF1	Q05164	967 aa		5	□□□□□ -1.61
YDR115W	YDR115W	SYT1	Q06836	1226 aa		5	□□□□□ -1.61
YDR115W	YDR115W	YOR296W	Q08748	1289 aa		5	□□□□□ -1.61
YDR115W	YDR115W	SMC1	P32908	1225 aa		4.99	□□□□□ -1.61
YDR115W	YDR115W	ISW1	P38144	1129 aa		4.99	□□□□□ -1.61
YDR115W	YDR115W	FIR1	P40020	876 aa		4.99	□□□□□ -1.61
YDR115W	YDR115W	QDR1	P40475	563 aa		4.99	□□□□□ -1.61
YDR115W	YDR115W	HXT8	P40886	569 aa		4.99	□□□□□ -1.61
YDR115W	YDR115W	ADE12	P80210	433 aa	Known RBP	4.99	□□□□□ -1.61
YDR115W	YDR115W	YBL113C	Q7M4S9	792 aa		4.99	□□□□□ -1.61
YDR115W	YDR115W	RPB10	P22139	70 aa		4.98	□□□□□ -1.61
YDR115W	YDR115W	APM2	P38700	605 aa		4.98	□□□□□ -1.61
YDR115W	YDR115W	UFD2	P54860	961 aa		4.98	□□□□□ -1.61
YDR115W	YDR115W	TRL1	P09880	827 aa	Known RBP	4.97	□□□□□ -1.61
YDR115W	YDR115W	ERP5	P38819	212 aa		4.97	□□□□□ -1.61
YDR115W	YDR115W	SUT1	P53032	299 aa	Known RBP	4.97	□□□□□ -1.61
YDR115W	YDR115W	MSN1	P22148	382 aa		4.96	□□□□□ -1.62
YDR115W	YDR115W	KTR2	P33550	425 aa		4.96	□□□□□ -1.62
YDR115W	YDR115W	GRS1	P38088	690 aa	Known RBP	4.96	□□□□□ -1.62
YDR115W	YDR115W	BSD2	P38356	321 aa		4.96	□□□□□ -1.62
YDR115W	YDR115W	YER156C	P40093	338 aa	Known RBP	4.96	□□□□□ -1.62
YDR115W	YDR115W	MSC7	P38694	644 aa		4.95	□□□□□ -1.62
YDR115W	YDR115W	STM1	P39015	273 aa	Known RBP	4.95	□□□□□ -1.62
YDR115W	YDR115W	NTA1	P40354	457 aa		4.95	□□□□□ -1.62
YDR115W	YDR115W	TY1A-DR2	Q03964	440 aa	Known RBP	4.95	□□□□□ -1.62
YDR115W	YDR115W	RAD55	P38953	406 aa		4.94	□□□□□ -1.62
YDR115W	YDR115W	ITC1	P53125	1264 aa		4.94	□□□□□ -1.62
YDR115W	YDR115W	TRS120	Q04183	1289 aa		4.94	□□□□□ -1.62
YDR115W	YDR115W	RSC2	Q06488	889 aa		4.94	□□□□□ -1.62
YDR115W	YDR115W	TRK2	P28584	889 aa		4.93	□□□□□ -1.62
YDR115W	YDR115W	KNS1	P32350	737 aa	Predicted RBP	4.93	□□□□□ -1.62
YDR115W	YDR115W	SLD2	P34252	453 aa		4.93	□□□□□ -1.62
YDR115W	YDR115W	IRS4	P36115	615 aa	Known RBP	4.93	□□□□□ -1.62
YDR115W	YDR115W	MDJ2	P42834	146 aa		4.93	□□□□□ -1.62
YDR115W	YDR115W	GPM1	P00950	247 aa	Known RBP	4.92	□□□□□ -1.62
YDR115W	YDR115W	SEC20	P28791	383 aa		4.92	□□□□□ -1.62
YDR115W	YDR115W	YIL165C	P40446	119 aa		4.92	□□□□□ -1.62
YDR115W	YDR115W	RGD2	P43556	714 aa		4.92	□□□□□ -1.62
YDR115W	YDR115W	YNR040W	P53736	256 aa		4.92	□□□□□ -1.62
YDR115W	YDR115W	YML020W	Q03722	664 aa		4.92	□□□□□ -1.62
YDR115W	YDR115W	NOP8	Q08287	484 aa	Predicted RBP	4.92	□□□□□ -1.62
YDR115W	YDR115W	IDI1	P15496	288 aa		4.91	□□□□□ -1.62
YDR115W	YDR115W	PDC5	P16467	563 aa	Known RBP	4.91	□□□□□ -1.62
YDR115W	YDR115W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
YDR115W	YDR115W	PPX1	P38698	397 aa		4.91	□□□□□ -1.62
YDR115W	YDR115W	AIM46	P38885	310 aa		4.91	□□□□□ -1.62
YDR115W	YDR115W	PSY2	P40164	858 aa		4.91	□□□□□ -1.62
YDR115W	YDR115W	PRK1	P40494	810 aa		4.91	□□□□□ -1.62
YDR115W	YDR115W	NUT2	Q06213	157 aa		4.91	□□□□□ -1.62
YDR115W	YDR115W	YHL050C	P38721	697 aa		4.9	□□□□□ -1.63
YDR115W	YDR115W	YHR219W	P38900	624 aa		4.9	□□□□□ -1.63
YDR115W	YDR115W	EMG1	Q06287	252 aa	Known RBP	4.9	□□□□□ -1.63
YDR115W	YDR115W	RGA2	Q06407	1009 aa		4.9	□□□□□ -1.63
YDR115W	YDR115W	TIF6	Q12522	245 aa	Known RBP	4.9	□□□□□ -1.63
YDR115W	YDR115W	AI1	P03875	834 aa		4.89	□□□□□ -1.63
YDR115W	YDR115W	PPT1	P53043	513 aa		4.89	□□□□□ -1.63
YDR115W	YDR115W	CDC55	Q00362	526 aa		4.89	□□□□□ -1.63
YDR115W	YDR115W	RSC4	Q02206	625 aa		4.89	□□□□□ -1.63
YDR115W	YDR115W	MSC6	Q08818	692 aa	Known RBP	4.89	□□□□□ -1.63
YDR115W	YDR115W	FRT1	Q99332	602 aa		4.89	□□□□□ -1.63
YDR115W	YDR115W	MET1	P36150	593 aa		4.88	□□□□□ -1.63
YDR115W	YDR115W	YNL011C	P53980	444 aa		4.88	□□□□□ -1.63
YDR115W	YDR115W	FUS1	P11710	512 aa		4.87	□□□□□ -1.63
YDR115W	YDR115W	SEN54	Q02825	467 aa	Predicted RBP	4.87	□□□□□ -1.63
YDR115W	YDR115W	MNL2	Q12205	849 aa		4.87	□□□□□ -1.63
YDR115W	YDR115W	SLP1	Q12232	587 aa		4.87	□□□□□ -1.63
YDR115W	YDR115W	SAM37	P50110	327 aa		4.86	□□□□□ -1.63
YDR115W	YDR115W	BSC2	Q05611	235 aa		4.86	□□□□□ -1.63
YDR115W	YDR115W	GCD6	P32501	712 aa	Known RBP	4.85	□□□□□ -1.63
YDR115W	YDR115W	GIS4	Q04233	774 aa		4.85	□□□□□ -1.63
YDR115W	YDR115W	ALG14	P38242	237 aa		4.84	□□□□□ -1.63
YDR115W	YDR115W	INP51	P40559	946 aa	Known RBP	4.84	□□□□□ -1.63
YDR115W	YDR115W	LEM3	P42838	414 aa		4.84	□□□□□ -1.63
YDR115W	YDR115W	PHM7	Q12252	991 aa		4.84	□□□□□ -1.63
YDR115W	YDR115W	NHA1	Q99271	985 aa		4.84	□□□□□ -1.63
YDR115W	YDR115W	PYC2	P32327	1180 aa	Known RBP	4.83	□□□□□ -1.64
YDR115W	YDR115W	ECM2	P38241	364 aa	Known RBP	4.83	□□□□□ -1.64
YDR115W	YDR115W	CIC1	P38779	376 aa	Known RBP	4.83	□□□□□ -1.64
YDR115W	YDR115W	YJL181W	P46987	611 aa		4.83	□□□□□ -1.64
YDR115W	YDR115W	YNR014W	P53719	212 aa		4.83	□□□□□ -1.64
YDR115W	YDR115W	GPI13	Q07830	1017 aa		4.83	□□□□□ -1.64
YDR115W	YDR115W	SOG2	Q08817	791 aa		4.83	□□□□□ -1.64
YDR115W	YDR115W	NAR1	P23503	491 aa	Known RBP	4.82	□□□□□ -1.64
YDR115W	YDR115W	ASF1	P32447	279 aa		4.82	□□□□□ -1.64
YDR115W	YDR115W	PGM2	P37012	569 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms