RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	TEA1	P47988	759 aa		4.1	□□□□□ -1.75
PSF1	YDR013W	YRB30	P53107	440 aa	Predicted RBP	4.1	□□□□□ -1.75
PSF1	YDR013W	RVB2	Q12464	471 aa	Known RBP	4.1	□□□□□ -1.75
PSF1	YDR013W	MNN4	P36044	1178 aa		4.09	□□□□□ -1.75
PSF1	YDR013W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PSF1	YDR013W	MPP10	P47083	593 aa	Known RBP	4.09	□□□□□ -1.75
PSF1	YDR013W	RCM1	P53972	490 aa		4.09	□□□□□ -1.75
PSF1	YDR013W	NAM8	Q00539	523 aa	Known RBP	4.09	□□□□□ -1.75
PSF1	YDR013W	TBF1	Q02457	562 aa		4.09	□□□□□ -1.75
PSF1	YDR013W	AI1	P03875	834 aa		4.08	□□□□□ -1.76
PSF1	YDR013W	PDR11	P40550	1411 aa		4.08	□□□□□ -1.76
PSF1	YDR013W	PUS6	P53294	404 aa		4.08	□□□□□ -1.76
PSF1	YDR013W	SEC7	P11075	2009 aa	Known RBP	4.07	□□□□□ -1.76
PSF1	YDR013W	KRE5	P22023	1365 aa		4.07	□□□□□ -1.76
PSF1	YDR013W	LEU2	P04173	364 aa	Predicted RBP	4.07	□□□□□ -1.76
PSF1	YDR013W	PBS2	P08018	668 aa		4.07	□□□□□ -1.76
PSF1	YDR013W	DAL5	P15365	543 aa		4.07	□□□□□ -1.76
PSF1	YDR013W	CSE4	P36012	229 aa		4.07	□□□□□ -1.76
PSF1	YDR013W	FPK1	P53739	893 aa		4.07	□□□□□ -1.76
PSF1	YDR013W	APP1	P53933	587 aa		4.07	□□□□□ -1.76
PSF1	YDR013W	YPR053C	Q6Q5F3	151 aa		4.07	□□□□□ -1.76
PSF1	YDR013W	GRX4	P32642	244 aa		4.06	□□□□□ -1.76
PSF1	YDR013W	NOP8	Q08287	484 aa	Predicted RBP	4.06	□□□□□ -1.76
PSF1	YDR013W	TRM1	P15565	570 aa	Known RBP	4.05	□□□□□ -1.76
PSF1	YDR013W	MTR4	P47047	1073 aa	Known RBP	4.05	□□□□□ -1.76
PSF1	YDR013W	GAS4	Q08271	471 aa		4.05	□□□□□ -1.76
PSF1	YDR013W	BCK1	Q01389	1478 aa		4.05	□□□□□ -1.76
PSF1	YDR013W	CDC19	P00549	500 aa	Known RBP	4.04	□□□□□ -1.76
PSF1	YDR013W	SUI2	P20459	304 aa	Known RBP	4.04	□□□□□ -1.76
PSF1	YDR013W	VAC17	P25591	423 aa		4.04	□□□□□ -1.76
PSF1	YDR013W	SAP155	P43612	1002 aa		4.04	□□□□□ -1.76
PSF1	YDR013W	YML133C	Q03099	1374 aa		4.03	□□□□□ -1.76
PSF1	YDR013W	YLL067C	Q07888	1374 aa		4.03	□□□□□ -1.76
PSF1	YDR013W	YLL066C	Q99208	1374 aa		4.03	□□□□□ -1.76
PSF1	YDR013W	MLP1	Q02455	1875 aa	Known RBP	4.03	□□□□□ -1.76
PSF1	YDR013W	SCJ1	P25303	377 aa		4.03	□□□□□ -1.76
PSF1	YDR013W	MAK10	Q02197	733 aa		4.03	□□□□□ -1.76
PSF1	YDR013W	PUF6	Q04373	656 aa	Known RBP	4.03	□□□□□ -1.76
PSF1	YDR013W	SNF2	P22082	1703 aa		4.03	□□□□□ -1.76
PSF1	YDR013W	RPS24A	P0CX31	135 aa	Known RBP	4.02	□□□□□ -1.77
PSF1	YDR013W	RPS24B	P0CX32	135 aa	Known RBP	4.02	□□□□□ -1.77
PSF1	YDR013W	YBR287W	P38355	427 aa		4.02	□□□□□ -1.77
PSF1	YDR013W	SKN7	P38889	622 aa		4.02	□□□□□ -1.77
PSF1	YDR013W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
PSF1	YDR013W	CUZ1	P53899	274 aa		4.02	□□□□□ -1.77
PSF1	YDR013W	ECM16	Q04217	1267 aa	Known RBP	4.02	□□□□□ -1.77
PSF1	YDR013W	YMR196W	Q04336	1088 aa		4.02	□□□□□ -1.77
PSF1	YDR013W	PSK1	P31374	1356 aa		4.02	□□□□□ -1.77
PSF1	YDR013W	NUP192	P47054	1683 aa		4.01	□□□□□ -1.77
PSF1	YDR013W	CLC1	P17891	233 aa		4.01	□□□□□ -1.77
PSF1	YDR013W	PRD1	P25375	712 aa		4.01	□□□□□ -1.77
PSF1	YDR013W	SBE2	P42223	864 aa	Known RBP	4.01	□□□□□ -1.77
PSF1	YDR013W	EMW1	P42842	904 aa	Known RBP	4.01	□□□□□ -1.77
PSF1	YDR013W	ZDS1	P50111	915 aa	Known RBP	4.01	□□□□□ -1.77
PSF1	YDR013W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
PSF1	YDR013W	TAP42	Q04372	366 aa		4.01	□□□□□ -1.77
PSF1	YDR013W	HIM1	Q06674	414 aa		4.01	□□□□□ -1.77
PSF1	YDR013W	MAM3	Q12296	706 aa		4.01	□□□□□ -1.77
PSF1	YDR013W	YEF3	P16521	1044 aa	Known RBP	4	□□□□□ -1.77
PSF1	YDR013W	CPS1	P27614	576 aa		4	□□□□□ -1.77
PSF1	YDR013W	PPH3	P32345	308 aa		4	□□□□□ -1.77
PSF1	YDR013W	IES2	P40154	320 aa		4	□□□□□ -1.77
PSF1	YDR013W	YNR029C	P53729	429 aa	Known RBP	4	□□□□□ -1.77
PSF1	YDR013W	COG8	Q04632	607 aa		4	□□□□□ -1.77
PSF1	YDR013W	TDA6	Q06466	467 aa		4	□□□□□ -1.77
PSF1	YDR013W	NMD2	P38798	1089 aa	Known RBP	3.99	□□□□□ -1.77
PSF1	YDR013W	RRT14	P40470	206 aa		3.99	□□□□□ -1.77
PSF1	YDR013W	KRI1	P42846	591 aa	Known RBP	3.99	□□□□□ -1.77
PSF1	YDR013W	GYP7	P48365	746 aa		3.99	□□□□□ -1.77
PSF1	YDR013W	IOC4	Q04213	475 aa		3.99	□□□□□ -1.77
PSF1	YDR013W	DFG5	Q05031	458 aa		3.99	□□□□□ -1.77
PSF1	YDR013W	RPO41	P13433	1351 aa	Known RBP	3.99	□□□□□ -1.77
PSF1	YDR013W	HSP104	P31539	908 aa	Known RBP	3.98	□□□□□ -1.77
PSF1	YDR013W	VPS24	P36095	224 aa	Known RBP	3.98	□□□□□ -1.77
PSF1	YDR013W	AKL1	P38080	1108 aa	Known RBP	3.98	□□□□□ -1.77
PSF1	YDR013W	CEM1	P39525	442 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	YIL092W	P40497	633 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	POL32	P47110	350 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	YMR187C	Q03236	431 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	NSE3	Q05541	303 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	THI22	Q06490	572 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	AOS1	Q06624	347 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	RTT109	Q07794	436 aa		3.98	□□□□□ -1.77
PSF1	YDR013W	CAB3	P36076	571 aa		3.97	□□□□□ -1.77
PSF1	YDR013W	RFC1	P38630	861 aa	Known RBP	3.97	□□□□□ -1.77
PSF1	YDR013W	YNG2	P38806	282 aa	Known RBP	3.97	□□□□□ -1.77
PSF1	YDR013W	MAM1	P40065	302 aa		3.97	□□□□□ -1.77
PSF1	YDR013W	NUP42	P49686	430 aa	Known RBP	3.97	□□□□□ -1.77
PSF1	YDR013W	RAD50	P12753	1312 aa		3.96	□□□□□ -1.77
PSF1	YDR013W	MKS1	P34072	584 aa		3.96	□□□□□ -1.78
PSF1	YDR013W	ITC1	P53125	1264 aa		3.96	□□□□□ -1.78
PSF1	YDR013W	YGL081W	P53156	320 aa		3.96	□□□□□ -1.78
PSF1	YDR013W	RLF2	Q12495	606 aa		3.96	□□□□□ -1.78
PSF1	YDR013W	NCB2	Q92317	146 aa		3.96	□□□□□ -1.78
PSF1	YDR013W	DNF3	Q12674	1656 aa		3.96	□□□□□ -1.78
PSF1	YDR013W	SIR4	P11978	1358 aa		3.95	□□□□□ -1.78
PSF1	YDR013W	PRP45	P28004	379 aa	Predicted RBP	3.95	□□□□□ -1.78
PSF1	YDR013W	SIS2	P36024	562 aa		3.95	□□□□□ -1.78
PSF1	YDR013W	DJP1	P40564	432 aa		3.95	□□□□□ -1.78
PSF1	YDR013W	RRP46	P53256	223 aa	Predicted RBP	3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms