RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W SKP1P52286 194 aa7.55□□□□□ -1.2
SHR3YDL212W DPH6Q12429 685 aa7.54□□□□□ -1.2
SHR3YDL212W RPB10P22139 70 aa7.53□□□□□ -1.2
SHR3YDL212W FPS1P23900 669 aa7.53□□□□□ -1.2
SHR3YDL212W LSO1Q3E827 93 aa7.53□□□□□ -1.2
SHR3YDL212W TRK2P28584 889 aa7.52□□□□□ -1.21
SHR3YDL212W BSD2P38356 321 aa7.52□□□□□ -1.21
SHR3YDL212W YNR040WP53736 256 aa7.52□□□□□ -1.21
SHR3YDL212W APC11Q12157 165 aa7.52□□□□□ -1.21
SHR3YDL212W CDC3P32457 520 aaKnown RBP7.51□□□□□ -1.21
SHR3YDL212W RRN6P32786 894 aa7.51□□□□□ -1.21
SHR3YDL212W TY1A-DR2Q03964 440 aaKnown RBP7.51□□□□□ -1.21
SHR3YDL212W KAR5Q04746 504 aa7.51□□□□□ -1.21
SHR3YDL212W FUR4P05316 633 aaKnown RBP7.5□□□□□ -1.21
SHR3YDL212W DYS1P38791 387 aa7.5□□□□□ -1.21
SHR3YDL212W YOR296WQ08748 1289 aa7.5□□□□□ -1.21
SHR3YDL212W LDH1P38139 375 aa7.49□□□□□ -1.21
SHR3YDL212W SUT1P53032 299 aaKnown RBP7.48□□□□□ -1.21
SHR3YDL212W ITC1P53125 1264 aa7.48□□□□□ -1.21
SHR3YDL212W MSN1P22148 382 aa7.47□□□□□ -1.21
SHR3YDL212W APM2P38700 605 aa7.47□□□□□ -1.21
SHR3YDL212W GPM1P00950 247 aaKnown RBP7.46□□□□□ -1.22
SHR3YDL212W NCL1P38205 684 aaKnown RBP7.45□□□□□ -1.22
SHR3YDL212W GIP1P38229 639 aa7.45□□□□□ -1.22
SHR3YDL212W GLO3P38682 493 aaKnown RBP7.45□□□□□ -1.22
SHR3YDL212W QDR1P40475 563 aa7.45□□□□□ -1.22
SHR3YDL212W PRK1P40494 810 aa7.45□□□□□ -1.22
SHR3YDL212W TRL1P09880 827 aaKnown RBP7.44□□□□□ -1.22
SHR3YDL212W HXT8P40886 569 aa7.44□□□□□ -1.22
SHR3YDL212W ATG1P53104 897 aa7.44□□□□□ -1.22
SHR3YDL212W HAT1Q12341 374 aa7.44□□□□□ -1.22
SHR3YDL212W RPP1AP05318 106 aaPredicted RBP7.43□□□□□ -1.22
SHR3YDL212W PDC5P16467 563 aaKnown RBP7.43□□□□□ -1.22
SHR3YDL212W ERP5P38819 212 aa7.43□□□□□ -1.22
SHR3YDL212W RGD2P43556 714 aa7.43□□□□□ -1.22
SHR3YDL212W HEH2Q03281 663 aa7.43□□□□□ -1.22
SHR3YDL212W IDI1P15496 288 aa7.42□□□□□ -1.22
SHR3YDL212W ISW1P38144 1129 aa7.42□□□□□ -1.22
SHR3YDL212W YBL113CQ7M4S9 792 aa7.42□□□□□ -1.22
SHR3YDL212W MRP10O75012 95 aa7.41□□□□□ -1.22
SHR3YDL212W KNS1P32350 737 aaPredicted RBP7.4□□□□□ -1.22
SHR3YDL212W GRS1P38088 690 aaKnown RBP7.4□□□□□ -1.22
SHR3YDL212W YFL066CP43538 392 aa7.4□□□□□ -1.22
SHR3YDL212W YER156CP40093 338 aaKnown RBP7.39□□□□□ -1.23
SHR3YDL212W SBE2P42223 864 aaKnown RBP7.39□□□□□ -1.23
SHR3YDL212W MDJ2P42834 146 aa7.39□□□□□ -1.23
SHR3YDL212W EMG1Q06287 252 aaKnown RBP7.39□□□□□ -1.23
SHR3YDL212W MDJ1P35191 511 aa7.38□□□□□ -1.23
SHR3YDL212W NTA1P40354 457 aa7.38□□□□□ -1.23
SHR3YDL212W YIL165CP40446 119 aa7.38□□□□□ -1.23
SHR3YDL212W TIF6Q12522 245 aaKnown RBP7.38□□□□□ -1.23
SHR3YDL212W AI1P03875 834 aa7.37□□□□□ -1.23
SHR3YDL212W SSF1P38789 453 aaPredicted RBP7.37□□□□□ -1.23
SHR3YDL212W RAD55P38953 406 aa7.37□□□□□ -1.23
SHR3YDL212W ACF4P47129 309 aa7.37□□□□□ -1.23
SHR3YDL212W RGA2Q06407 1009 aa7.37□□□□□ -1.23
SHR3YDL212W FIR1P40020 876 aa7.36□□□□□ -1.23
SHR3YDL212W SMC1P32908 1225 aa7.35□□□□□ -1.23
SHR3YDL212W THI72Q08579 599 aa7.35□□□□□ -1.23
SHR3YDL212W FRT1Q99332 602 aa7.35□□□□□ -1.23
SHR3YDL212W PSY2P40164 858 aa7.34□□□□□ -1.23
SHR3YDL212W PPT1P53043 513 aa7.34□□□□□ -1.23
SHR3YDL212W AIM46P38885 310 aa7.33□□□□□ -1.24
SHR3YDL212W NSG2P53898 299 aa7.33□□□□□ -1.24
SHR3YDL212W NUT2Q06213 157 aa7.33□□□□□ -1.24
SHR3YDL212W MNL2Q12205 849 aa7.33□□□□□ -1.24
SHR3YDL212W IRS4P36115 615 aaKnown RBP7.32□□□□□ -1.24
SHR3YDL212W UFD2P54860 961 aa7.32□□□□□ -1.24
SHR3YDL212W TRS120Q04183 1289 aa7.32□□□□□ -1.24
SHR3YDL212W NAR1P23503 491 aaKnown RBP7.31□□□□□ -1.24
SHR3YDL212W YJL181WP46987 611 aa7.31□□□□□ -1.24
SHR3YDL212W GIS4Q04233 774 aa7.31□□□□□ -1.24
SHR3YDL212W TDA6Q06466 467 aa7.31□□□□□ -1.24
SHR3YDL212W PGM2P37012 569 aaKnown RBP7.3□□□□□ -1.24
SHR3YDL212W YNR014WP53719 212 aa7.3□□□□□ -1.24
SHR3YDL212W GPI13Q07830 1017 aa7.3□□□□□ -1.24
SHR3YDL212W TFA2P36145 328 aa7.29□□□□□ -1.24
SHR3YDL212W YHL050CP38721 697 aa7.29□□□□□ -1.24
SHR3YDL212W YHR219WP38900 624 aa7.29□□□□□ -1.24
SHR3YDL212W ALD3P54114 506 aa7.29□□□□□ -1.24
SHR3YDL212W ALG14P38242 237 aa7.28□□□□□ -1.24
SHR3YDL212W BOI2P39969 1040 aa7.28□□□□□ -1.24
SHR3YDL212W RSC4Q02206 625 aa7.28□□□□□ -1.24
SHR3YDL212W COBP00163 385 aa7.27□□□□□ -1.25
SHR3YDL212W YBR287WP38355 427 aa7.27□□□□□ -1.25
SHR3YDL212W CTR9P89105 1077 aa7.27□□□□□ -1.25
SHR3YDL212W RSC2Q06488 889 aa7.27□□□□□ -1.25
SHR3YDL212W PHM7Q12252 991 aa7.27□□□□□ -1.25
SHR3YDL212W PYC2P32327 1180 aaKnown RBP7.26□□□□□ -1.25
SHR3YDL212W ICP55P40051 511 aa7.26□□□□□ -1.25
SHR3YDL212W INP51P40559 946 aaKnown RBP7.26□□□□□ -1.25
SHR3YDL212W MET1P36150 593 aa7.25□□□□□ -1.25
SHR3YDL212W MCX1P38323 520 aaPredicted RBP7.25□□□□□ -1.25
SHR3YDL212W NHA1Q99271 985 aa7.25□□□□□ -1.25
SHR3YDL212W FUS1P11710 512 aa7.24□□□□□ -1.25
SHR3YDL212W BIO5P53744 561 aaKnown RBP7.24□□□□□ -1.25
SHR3YDL212W SEN54Q02825 467 aaPredicted RBP7.24□□□□□ -1.25
SHR3YDL212W YNL011CP53980 444 aa7.23□□□□□ -1.25
SHR3YDL212W CDC55Q00362 526 aa7.23□□□□□ -1.25
SHR3YDL212W YML020WQ03722 664 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms