RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	SLD2	P34252	453 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	VPS30	Q02948	557 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	SEC14	P24280	304 aa	Known RBP	4.55	□□□□□ -1.68
VMA1	YDL185W	OSW7	P43611	510 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	GYP7	P48365	746 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	DNM1	P54861	757 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	APL4	Q12028	832 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	RRP5	Q05022	1729 aa	Known RBP	4.55	□□□□□ -1.68
VMA1	YDL185W	MRPL32	P25348	183 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	RDS1	P25611	832 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	PUP2	P32379	260 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	ZUO1	P32527	433 aa	Known RBP	4.55	□□□□□ -1.68
VMA1	YDL185W	TYS1	P36421	394 aa	Known RBP	4.55	□□□□□ -1.68
VMA1	YDL185W	SAP1	P39955	897 aa	Known RBP	4.55	□□□□□ -1.68
VMA1	YDL185W	BDP1	P46678	594 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	PRY3	P47033	881 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	YGL242C	P53066	181 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	CAB1	Q04430	367 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	ERV41	Q04651	352 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	YDR338C	Q05497	695 aa		4.55	□□□□□ -1.68
VMA1	YDL185W	RRP15	Q06511	250 aa	Predicted RBP	4.55	□□□□□ -1.68
VMA1	YDL185W	PET123	P17558	318 aa		4.54	□□□□□ -1.68
VMA1	YDL185W	DAL7	P21826	554 aa		4.54	□□□□□ -1.68
VMA1	YDL185W	MUD2	P36084	527 aa	Known RBP	4.54	□□□□□ -1.68
VMA1	YDL185W	OLA1	P38219	394 aa	Known RBP	4.54	□□□□□ -1.68
VMA1	YDL185W	TPS3	P38426	1054 aa	Known RBP	4.54	□□□□□ -1.68
VMA1	YDL185W	YER130C	P39959	443 aa		4.54	□□□□□ -1.68
VMA1	YDL185W	SLP1	Q12232	587 aa		4.54	□□□□□ -1.68
VMA1	YDL185W	RPO41	P13433	1351 aa	Known RBP	4.54	□□□□□ -1.68
VMA1	YDL185W	DPH5	P32469	300 aa	Predicted RBP	4.54	□□□□□ -1.68
VMA1	YDL185W	SRP40	P32583	406 aa	Predicted RBP	4.54	□□□□□ -1.68
VMA1	YDL185W	ORM2	Q06144	216 aa		4.54	□□□□□ -1.68
VMA1	YDL185W	YOR223W	Q12015	292 aa		4.54	□□□□□ -1.68
VMA1	YDL185W	ATG9	Q12142	997 aa		4.54	□□□□□ -1.68
VMA1	YDL185W	CPA2	P03965	1118 aa	Known RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	TOP1	P04786	769 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	GCD7	P32502	381 aa	Predicted RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	YJR142W	P47173	342 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	CTF18	P49956	741 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	PXR1	P53335	271 aa	Predicted RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	MDM38	Q08179	573 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	PDI1	P17967	522 aa	Known RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	ECM32	P32644	1121 aa	Known RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
VMA1	YDL185W	AAP1	P37898	856 aa	Known RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	RBA50	Q04418	439 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	UBC1	P21734	215 aa	Known RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	GSY2	P27472	705 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	PPH3	P32345	308 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	HEL1	P36113	551 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	PSY4	P38193	441 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	BBC1	P47068	1157 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	PEX14	P53112	341 aa		4.53	□□□□□ -1.68
VMA1	YDL185W	URB1	P34241	1764 aa	Known RBP	4.53	□□□□□ -1.68
VMA1	YDL185W	PRP16	P15938	1071 aa	Predicted RBP	4.52	□□□□□ -1.69
VMA1	YDL185W	RRP1	P35178	278 aa	Predicted RBP	4.52	□□□□□ -1.69
VMA1	YDL185W	REI1	P38344	393 aa	Predicted RBP	4.52	□□□□□ -1.69
VMA1	YDL185W	CCT4	P39078	528 aa	Known RBP	4.52	□□□□□ -1.69
VMA1	YDL185W	ALD2	P47771	506 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	VMS1	Q04311	632 aa	Known RBP	4.52	□□□□□ -1.69
VMA1	YDL185W	OMS1	Q06668	471 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	RAM2	P29703	316 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	RRM3	P38766	723 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	ENT3	P47160	408 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	YGR122W	P53272	402 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	RIM20	Q12033	661 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	YPL150W	Q12152	901 aa		4.52	□□□□□ -1.69
VMA1	YDL185W	RAD24	P32641	659 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	GRX4	P32642	244 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	YBR287W	P38355	427 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	CCC2	P38995	1004 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	LEU2	P04173	364 aa	Predicted RBP	4.51	□□□□□ -1.69
VMA1	YDL185W	RPO26	P20435	155 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	MRM1	P25270	412 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	DPB3	P27344	201 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	CDC15	P27636	974 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	PXL1	P36166	706 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	MAL33	P38157	468 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	YPT11	P48559	417 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	ZDS1	P50111	915 aa	Known RBP	4.51	□□□□□ -1.69
VMA1	YDL185W	CAF130	P53280	1122 aa	Predicted RBP	4.51	□□□□□ -1.69
VMA1	YDL185W	MAL13	P53338	473 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	SDH5	Q08230	162 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	SWI1	P09547	1314 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	YME2	P32843	850 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	HUL4	P40985	892 aa		4.51	□□□□□ -1.69
VMA1	YDL185W	APT1	P49435	187 aa	Known RBP	4.51	□□□□□ -1.69
VMA1	YDL185W	CMS1	Q07897	291 aa	Known RBP	4.51	□□□□□ -1.69
VMA1	YDL185W	MAK11	P20484	414 aa	Known RBP	4.5	□□□□□ -1.69
VMA1	YDL185W	CDC60	P26637	1090 aa	Known RBP	4.5	□□□□□ -1.69
VMA1	YDL185W	AKL1	P38080	1108 aa	Known RBP	4.5	□□□□□ -1.69
VMA1	YDL185W	NDC80	P40460	691 aa		4.5	□□□□□ -1.69
VMA1	YDL185W	SEC26	P41810	973 aa	Known RBP	4.5	□□□□□ -1.69
VMA1	YDL185W	RSC8	P43609	557 aa	Known RBP	4.5	□□□□□ -1.69
VMA1	YDL185W	UBX2	Q04228	584 aa		4.5	□□□□□ -1.69
VMA1	YDL185W	ADE6	P38972	1358 aa	Known RBP	4.5	□□□□□ -1.69
VMA1	YDL185W	SPT8	P38915	602 aa		4.5	□□□□□ -1.69
VMA1	YDL185W	SEC9	P40357	651 aa		4.5	□□□□□ -1.69
VMA1	YDL185W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
VMA1	YDL185W	RCM1	P53972	490 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms