RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C POM152P39685 1337 aa9.19□□□□□ -0.94
SLM3YDL033C PEA2P40091 420 aa9.18□□□□□ -0.94
SLM3YDL033C EMP47P43555 445 aa9.18□□□□□ -0.94
SLM3YDL033C YOL057WQ08225 711 aa9.18□□□□□ -0.94
SLM3YDL033C SRS2P12954 1174 aa9.17□□□□□ -0.94
SLM3YDL033C SET4P42948 560 aa9.17□□□□□ -0.94
SLM3YDL033C GYP7P48365 746 aa9.17□□□□□ -0.94
SLM3YDL033C VPS4P52917 437 aa9.17□□□□□ -0.94
SLM3YDL033C RSC1P53236 928 aa9.17□□□□□ -0.94
SLM3YDL033C YGR117CP53270 476 aa9.17□□□□□ -0.94
SLM3YDL033C HAP5Q02516 242 aa9.17□□□□□ -0.94
SLM3YDL033C FCP1Q03254 732 aa9.17□□□□□ -0.94
SLM3YDL033C THI22Q06490 572 aa9.17□□□□□ -0.94
SLM3YDL033C AFG2P32794 780 aa9.16□□□□□ -0.94
SLM3YDL033C DNM1P54861 757 aa9.16□□□□□ -0.94
SLM3YDL033C CWC15Q03772 175 aaKnown RBP9.16□□□□□ -0.94
SLM3YDL033C ECM16Q04217 1267 aaKnown RBP9.16□□□□□ -0.94
SLM3YDL033C PUF6Q04373 656 aaKnown RBP9.16□□□□□ -0.94
SLM3YDL033C MAK21Q12176 1025 aaKnown RBP9.16□□□□□ -0.94
SLM3YDL033C DPH6Q12429 685 aa9.16□□□□□ -0.94
SLM3YDL033C HPR1P17629 752 aaKnown RBP9.15□□□□□ -0.94
SLM3YDL033C TPD3P31383 635 aa9.15□□□□□ -0.94
SLM3YDL033C TCD1P38756 429 aa9.15□□□□□ -0.94
SLM3YDL033C RPS0BP46654 252 aaKnown RBP9.15□□□□□ -0.94
SLM3YDL033C CRF1Q04930 467 aa9.15□□□□□ -0.94
SLM3YDL033C RTT109Q07794 436 aa9.15□□□□□ -0.94
SLM3YDL033C RRG1Q12167 365 aaPredicted RBP9.15□□□□□ -0.94
SLM3YDL033C SWI1P09547 1314 aa9.14□□□□□ -0.95
SLM3YDL033C TRP5P00931 707 aaKnown RBP9.14□□□□□ -0.95
SLM3YDL033C KRE2P27809 442 aa9.14□□□□□ -0.95
SLM3YDL033C STV1P37296 890 aa9.14□□□□□ -0.95
SLM3YDL033C RAD26P40352 1085 aa9.14□□□□□ -0.95
SLM3YDL033C GAS5Q08193 484 aa9.14□□□□□ -0.95
SLM3YDL033C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
SLM3YDL033C ICP55P40051 511 aa9.13□□□□□ -0.95
SLM3YDL033C CST6P40535 587 aa9.13□□□□□ -0.95
SLM3YDL033C SEN54Q02825 467 aaPredicted RBP9.13□□□□□ -0.95
SLM3YDL033C UBX2Q04228 584 aa9.13□□□□□ -0.95
SLM3YDL033C TYW1Q08960 810 aaKnown RBP9.13□□□□□ -0.95
SLM3YDL033C BCH2P36122 765 aa9.12□□□□□ -0.95
SLM3YDL033C TIF6Q12522 245 aaKnown RBP9.12□□□□□ -0.95
SLM3YDL033C MIC60P36112 540 aa9.11□□□□□ -0.95
SLM3YDL033C NUP133P36161 1157 aa9.11□□□□□ -0.95
SLM3YDL033C GSM1P42950 618 aa9.11□□□□□ -0.95
SLM3YDL033C RPT4P53549 437 aaKnown RBP9.11□□□□□ -0.95
SLM3YDL033C HOS3Q02959 697 aaKnown RBP9.11□□□□□ -0.95
SLM3YDL033C FPR4Q06205 392 aaPredicted RBP9.11□□□□□ -0.95
SLM3YDL033C RKM3P38222 552 aa9.1□□□□□ -0.95
SLM3YDL033C YDR306CQ06640 478 aa9.1□□□□□ -0.95
SLM3YDL033C SRF1Q12516 437 aa9.1□□□□□ -0.95
SLM3YDL033C MRP7P12687 371 aa9.09□□□□□ -0.95
SLM3YDL033C SDH2P21801 266 aa9.09□□□□□ -0.95
SLM3YDL033C BSD2P38356 321 aa9.09□□□□□ -0.95
SLM3YDL033C SPL2P38839 148 aa9.09□□□□□ -0.95
SLM3YDL033C NUG1P40010 520 aaKnown RBP9.09□□□□□ -0.95
SLM3YDL033C SRT1Q03175 343 aa9.09□□□□□ -0.95
SLM3YDL033C MGM1P32266 881 aa9.08□□□□□ -0.96
SLM3YDL033C NGR1P32831 672 aaKnown RBP9.08□□□□□ -0.96
SLM3YDL033C YJR008WP47085 338 aa9.08□□□□□ -0.96
SLM3YDL033C THI3Q07471 609 aa9.08□□□□□ -0.96
SLM3YDL033C CBP1P07252 654 aa9.07□□□□□ -0.96
SLM3YDL033C HVG1P0CE11 249 aa9.07□□□□□ -0.96
SLM3YDL033C LTV1P34078 463 aa9.07□□□□□ -0.96
SLM3YDL033C BDH2P39713 417 aa9.07□□□□□ -0.96
SLM3YDL033C HEF3P53978 1044 aaKnown RBP9.07□□□□□ -0.96
SLM3YDL033C PRP42Q03776 544 aaKnown RBP9.07□□□□□ -0.96
SLM3YDL033C PSH1Q12161 406 aa9.07□□□□□ -0.96
SLM3YDL033C CSR2Q12734 1121 aa9.07□□□□□ -0.96
SLM3YDL033C RAD50P12753 1312 aa9.06□□□□□ -0.96
SLM3YDL033C SAC3P46674 1301 aa9.06□□□□□ -0.96
SLM3YDL033C MCM2P29469 868 aa9.06□□□□□ -0.96
SLM3YDL033C RPN12P32496 274 aa9.06□□□□□ -0.96
SLM3YDL033C PNT1P38969 423 aa9.06□□□□□ -0.96
SLM3YDL033C RSM25P40496 264 aa9.06□□□□□ -0.96
SLM3YDL033C STU2P46675 888 aa9.06□□□□□ -0.96
SLM3YDL033C CWC22P53333 577 aaKnown RBP9.06□□□□□ -0.96
SLM3YDL033C VPS60Q03390 229 aa9.06□□□□□ -0.96
SLM3YDL033C FLO11P08640 1367 aa9.06□□□□□ -0.96
SLM3YDL033C YGL015CP33199 130 aa9.05□□□□□ -0.96
SLM3YDL033C SET1P38827 1080 aaKnown RBP9.05□□□□□ -0.96
SLM3YDL033C RRT6P53117 311 aaPredicted RBP9.05□□□□□ -0.96
SLM3YDL033C HST1P53685 503 aa9.05□□□□□ -0.96
SLM3YDL033C DLD1P32891 587 aa9.04□□□□□ -0.96
SLM3YDL033C PCS60P38137 543 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96 RIP-Chip
SLM3YDL033C CIN4P39110 191 aa9.04□□□□□ -0.96
SLM3YDL033C RVS167P39743 482 aaKnown RBP9.04□□□□□ -0.96
SLM3YDL033C SRC1Q03707 834 aa9.04□□□□□ -0.96
SLM3YDL033C CIR1P42940 261 aa9.03□□□□□ -0.96
SLM3YDL033C IRC4Q03036 179 aa9.03□□□□□ -0.96
SLM3YDL033C CST9Q06032 482 aa9.03□□□□□ -0.96
SLM3YDL033C TOS4Q06266 489 aa9.03□□□□□ -0.96
SLM3YDL033C SFI1Q12369 946 aa9.03□□□□□ -0.96
SLM3YDL033C AI2P03876 854 aa9.02□□□□□ -0.97
SLM3YDL033C KEX1P09620 729 aa9.02□□□□□ -0.97
SLM3YDL033C RPS7AP26786 190 aaKnown RBP9.02□□□□□ -0.97
SLM3YDL033C KRI1P42846 591 aaKnown RBP9.02□□□□□ -0.97
SLM3YDL033C NCS6P53088 359 aa9.02□□□□□ -0.97
SLM3YDL033C YGR122WP53272 402 aa9.02□□□□□ -0.97
SLM3YDL033C SUP35P05453 685 aaKnown RBP9.01□□□□□ -0.97
SLM3YDL033C CYC8P14922 966 aa9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms