RNA–Protein interactions for RNA: YCR081W

SRB8, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB8, Length 4,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB8YCR081W VID28P40547 921 aa3.11□□□□□ -1.91
SRB8YCR081W RIA1P53893 1110 aa3.11□□□□□ -1.91
SRB8YCR081W POB3Q04636 552 aaKnown RBP3.11□□□□□ -1.91
SRB8YCR081W RTC5Q12108 567 aaKnown RBP3.11□□□□□ -1.91
SRB8YCR081W TAF5P38129 798 aa3.11□□□□□ -1.91
SRB8YCR081W TCB1Q12466 1186 aa3.11□□□□□ -1.91
SRB8YCR081W ADE3P07245 946 aaKnown RBP3.1□□□□□ -1.91
SRB8YCR081W PET122P10355 254 aa3.1□□□□□ -1.91
SRB8YCR081W YGL140CP53120 1219 aa3.1□□□□□ -1.91
SRB8YCR081W RRB1Q04225 511 aaKnown RBP3.1□□□□□ -1.91
SRB8YCR081W CLB1P24868 471 aa3.1□□□□□ -1.91
SRB8YCR081W RPN12P32496 274 aa3.1□□□□□ -1.91
SRB8YCR081W PXL1P36166 706 aa3.1□□□□□ -1.91
SRB8YCR081W EXO84P38261 753 aa3.1□□□□□ -1.91
SRB8YCR081W GPD2P41911 440 aaKnown RBP3.1□□□□□ -1.91
SRB8YCR081W APC2Q12440 853 aa3.1□□□□□ -1.91
SRB8YCR081W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
SRB8YCR081W RTC1Q08281 1341 aa3.1□□□□□ -1.91
SRB8YCR081W CLB5P30283 435 aa3.1□□□□□ -1.91
SRB8YCR081W RPT2P40327 437 aaKnown RBP3.1□□□□□ -1.91
SRB8YCR081W PEX19Q07418 342 aa3.1□□□□□ -1.91
SRB8YCR081W PSR1Q07800 427 aa3.1□□□□□ -1.91
SRB8YCR081W NKP1Q12493 238 aa3.1□□□□□ -1.91
SRB8YCR081W KRE5P22023 1365 aa3.1□□□□□ -1.91
SRB8YCR081W MCM1P11746 286 aa3.1□□□□□ -1.91
SRB8YCR081W PET123P17558 318 aa3.1□□□□□ -1.91
SRB8YCR081W MCM2P29469 868 aa3.1□□□□□ -1.91
SRB8YCR081W SCT1P32784 759 aa3.1□□□□□ -1.91
SRB8YCR081W RPC37P36121 282 aa3.1□□□□□ -1.91
SRB8YCR081W DJP1P40564 432 aa3.1□□□□□ -1.91
SRB8YCR081W GCD14P46959 383 aaPredicted RBP3.1□□□□□ -1.91
SRB8YCR081W SHE4P51534 789 aa3.1□□□□□ -1.91
SRB8YCR081W ESC2Q06340 456 aa3.1□□□□□ -1.91
SRB8YCR081W SUP35P05453 685 aaKnown RBP3.09□□□□□ -1.91
SRB8YCR081W CDC31P06704 161 aaKnown RBP3.09□□□□□ -1.91
SRB8YCR081W PDI1P17967 522 aaKnown RBP3.09□□□□□ -1.91
SRB8YCR081W PPH3P32345 308 aa3.09□□□□□ -1.91
SRB8YCR081W DPH5P32469 300 aaPredicted RBP3.09□□□□□ -1.91
SRB8YCR081W HIR2P32480 875 aa3.09□□□□□ -1.91
SRB8YCR081W PGA2P53903 129 aa3.09□□□□□ -1.91
SRB8YCR081W SGT2Q12118 346 aaKnown RBP3.09□□□□□ -1.91
SRB8YCR081W LAM4P38800 1345 aa3.09□□□□□ -1.91
SRB8YCR081W SUI2P20459 304 aaKnown RBP3.09□□□□□ -1.91
SRB8YCR081W BRF1P29056 596 aa3.09□□□□□ -1.91
SRB8YCR081W ASF1P32447 279 aa3.09□□□□□ -1.91
SRB8YCR081W UBP12P39538 1254 aa3.09□□□□□ -1.91
SRB8YCR081W ARB1P40024 610 aaKnown RBP3.09□□□□□ -1.91
SRB8YCR081W LAM5P43560 674 aa3.09□□□□□ -1.91
SRB8YCR081W MSN5P52918 1224 aa3.09□□□□□ -1.91
SRB8YCR081W YML119WQ03208 357 aa3.09□□□□□ -1.91
SRB8YCR081W TY1B-AO13527 1196 aaKnown RBP3.09□□□□□ -1.92
SRB8YCR081W TIF3P34167 436 aaKnown RBP3.09□□□□□ -1.92
SRB8YCR081W PIM1P36775 1133 aa3.09□□□□□ -1.92
SRB8YCR081W CAJ1P39101 391 aa3.09□□□□□ -1.92
SRB8YCR081W ASI1P54074 624 aa3.09□□□□□ -1.92
SRB8YCR081W CIR2Q08822 631 aa3.09□□□□□ -1.92
SRB8YCR081W SLP1Q12232 587 aa3.09□□□□□ -1.92
SRB8YCR081W CCC2P38995 1004 aa3.08□□□□□ -1.92
SRB8YCR081W ITC1P53125 1264 aa3.08□□□□□ -1.92
SRB8YCR081W MEH1Q02205 184 aa3.08□□□□□ -1.92
SRB8YCR081W RPO41P13433 1351 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W TRL1P09880 827 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W NAT1P12945 854 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W YSW1P38280 609 aa3.08□□□□□ -1.92
SRB8YCR081W RFC1P38630 861 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W SAP1P39955 897 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W YIR042CP40586 236 aa3.08□□□□□ -1.92
SRB8YCR081W CTK3P46963 296 aaPredicted RBP3.08□□□□□ -1.92
SRB8YCR081W INP52P50942 1183 aa3.08□□□□□ -1.92
SRB8YCR081W YGL081WP53156 320 aa3.08□□□□□ -1.92
SRB8YCR081W IST1P53843 298 aaPredicted RBP3.08□□□□□ -1.92
SRB8YCR081W STE23Q06010 1027 aa3.08□□□□□ -1.92
SRB8YCR081W IMH1Q06704 911 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W TAL1P15019 335 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W ADE2P21264 571 aaKnown RBP3.08□□□□□ -1.92
SRB8YCR081W CPS1P27614 576 aa3.08□□□□□ -1.92
SRB8YCR081W RRP1P35178 278 aaPredicted RBP3.08□□□□□ -1.92
SRB8YCR081W BEM4P39011 633 aa3.08□□□□□ -1.92
SRB8YCR081W PXA1P41909 870 aa3.08□□□□□ -1.92
SRB8YCR081W RPS3P05750 240 aaKnown RBP3.07□□□□□ -1.92
SRB8YCR081W HEM1P09950 548 aaPredicted RBP3.07□□□□□ -1.92
SRB8YCR081W YIL001WP40560 513 aa3.07□□□□□ -1.92
SRB8YCR081W ARO80Q04052 950 aa3.07□□□□□ -1.92
SRB8YCR081W PDS5Q04264 1277 aa3.07□□□□□ -1.92
SRB8YCR081W RSA3Q05942 220 aaKnown RBP3.07□□□□□ -1.92
SRB8YCR081W COG4Q06096 861 aa3.07□□□□□ -1.92
SRB8YCR081W CLP1Q08685 445 aaPredicted RBP3.07□□□□□ -1.92
SRB8YCR081W GLE1Q12315 538 aa3.07□□□□□ -1.92
SRB8YCR081W YHL012WP38709 493 aa3.07□□□□□ -1.92
SRB8YCR081W YHB1P39676 399 aaKnown RBP3.07□□□□□ -1.92
SRB8YCR081W MRX12P47084 519 aa3.07□□□□□ -1.92
SRB8YCR081W ESBP6P53918 673 aa3.07□□□□□ -1.92
SRB8YCR081W RSM28Q03430 361 aa3.07□□□□□ -1.92
SRB8YCR081W RCF1Q03713 159 aa3.07□□□□□ -1.92
SRB8YCR081W CLF1Q12309 687 aaPredicted RBP3.07□□□□□ -1.92
SRB8YCR081W BNI1P41832 1953 aa3.07□□□□□ -1.92
SRB8YCR081W STE5P32917 917 aa3.07□□□□□ -1.92
SRB8YCR081W TIF5P38431 405 aaKnown RBP3.07□□□□□ -1.92
SRB8YCR081W SFI1Q12369 946 aa3.07□□□□□ -1.92
SRB8YCR081W YPR089WO13585 888 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms