RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	RNT1	Q02555	471 aa		7.72	□□□□□ -1.17
HSM3	YBR272C	ATG26	Q06321	1198 aa		7.72	□□□□□ -1.17
HSM3	YBR272C	RUD3	Q12234	484 aa	Known RBP	7.72	□□□□□ -1.17
HSM3	YBR272C	NUP192	P47054	1683 aa		7.72	□□□□□ -1.17
HSM3	YBR272C	MAK11	P20484	414 aa	Known RBP	7.71	□□□□□ -1.17
HSM3	YBR272C	SPT5	P27692	1063 aa	Known RBP	7.71	□□□□□ -1.17
HSM3	YBR272C	SWH1	P35845	1188 aa		7.71	□□□□□ -1.17
HSM3	YBR272C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.17	not detected
HSM3	YBR272C	RRP9	Q06506	573 aa	Known RBP	7.71	□□□□□ -1.17
HSM3	YBR272C	CEX1	Q12453	761 aa		7.71	□□□□□ -1.17
HSM3	YBR272C	RAD9	P14737	1309 aa		7.71	□□□□□ -1.18
HSM3	YBR272C	OPI1	P21957	404 aa		7.7	□□□□□ -1.18
HSM3	YBR272C	BEM4	P39011	633 aa		7.7	□□□□□ -1.18
HSM3	YBR272C	VPS70	P47161	811 aa		7.7	□□□□□ -1.18
HSM3	YBR272C	JIP5	Q06214	492 aa	Predicted RBP	7.7	□□□□□ -1.18
HSM3	YBR272C	UTP4	Q06679	776 aa	Known RBP	7.7	□□□□□ -1.18
HSM3	YBR272C	APC5	Q08683	685 aa		7.7	□□□□□ -1.18
HSM3	YBR272C	SEC39	Q12745	709 aa		7.7	□□□□□ -1.18
HSM3	YBR272C	MRF1	P30775	413 aa	Predicted RBP	7.69	□□□□□ -1.18
HSM3	YBR272C	TAF5	P38129	798 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	EXO84	P38261	753 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	CIN4	P39110	191 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	GTT3	P39996	337 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	NDC80	P40460	691 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	KEL2	P50090	882 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	VPS60	Q03390	229 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	MFT1	P33441	392 aa	Known RBP	7.69	□□□□□ -1.18
HSM3	YBR272C	RPC37	P36121	282 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	VPS29	P38759	282 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	YIR014W	P40570	242 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	ALD4	P46367	519 aa	Known RBP	7.69	□□□□□ -1.18
HSM3	YBR272C	PCL8	Q08966	492 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	SLP1	Q12232	587 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	TY4A-H	Q6Q5P6	413 aa		7.69	□□□□□ -1.18
HSM3	YBR272C	NOP14	Q99207	810 aa	Known RBP	7.69	□□□□□ -1.18
HSM3	YBR272C	RAD16	P31244	790 aa		7.68	□□□□□ -1.18
HSM3	YBR272C	PEX5	P35056	612 aa		7.68	□□□□□ -1.18
HSM3	YBR272C	ERP2	P39704	215 aa		7.68	□□□□□ -1.18
HSM3	YBR272C	CTF4	Q01454	927 aa		7.68	□□□□□ -1.18
HSM3	YBR272C	YML119W	Q03208	357 aa		7.68	□□□□□ -1.18
HSM3	YBR272C	BRR1	Q99177	341 aa	Predicted RBP	7.68	□□□□□ -1.18
HSM3	YBR272C	MUM2	P38236	366 aa		7.67	□□□□□ -1.18
HSM3	YBR272C	EFM2	P38347	419 aa		7.67	□□□□□ -1.18
HSM3	YBR272C	NOC2	P39744	710 aa	Known RBP	7.67	□□□□□ -1.18
HSM3	YBR272C	SIT1	P39980	628 aa		7.67	□□□□□ -1.18
HSM3	YBR272C	BFA1	P47113	574 aa		7.67	□□□□□ -1.18
HSM3	YBR272C	LYS4	P49367	693 aa	Predicted RBP	7.67	□□□□□ -1.18
HSM3	YBR272C	BTN2	P53286	410 aa		7.67	□□□□□ -1.18
HSM3	YBR272C	YDR338C	Q05497	695 aa		7.67	□□□□□ -1.18
HSM3	YBR272C	MRD1	Q06106	887 aa	Known RBP	7.67	□□□□□ -1.18
HSM3	YBR272C	TIF3	P34167	436 aa	Known RBP	7.66	□□□□□ -1.18
HSM3	YBR272C	VPS27	P40343	622 aa	Known RBP	7.66	□□□□□ -1.18
HSM3	YBR272C	DOT5	P40553	215 aa		7.66	□□□□□ -1.18
HSM3	YBR272C	APL6	P46682	809 aa		7.66	□□□□□ -1.18
HSM3	YBR272C	PEX19	Q07418	342 aa		7.66	□□□□□ -1.18
HSM3	YBR272C	AVO1	Q08236	1176 aa		7.66	□□□□□ -1.18
HSM3	YBR272C	YOL087C	Q99247	1116 aa		7.66	□□□□□ -1.18
HSM3	YBR272C	CMP2	P14747	604 aa		7.65	□□□□□ -1.18
HSM3	YBR272C	SEC23	P15303	768 aa	Known RBP	7.65	□□□□□ -1.18
HSM3	YBR272C	ARC19	P33204	171 aa	Known RBP	7.65	□□□□□ -1.18
HSM3	YBR272C	NUF2	P33895	451 aa		7.65	□□□□□ -1.18
HSM3	YBR272C	PET100	P38958	111 aa		7.65	□□□□□ -1.18
HSM3	YBR272C	FAF1	P40546	346 aa	Predicted RBP	7.65	□□□□□ -1.18
HSM3	YBR272C	IES1	P43579	692 aa		7.65	□□□□□ -1.18
HSM3	YBR272C	ELA1	P53861	379 aa	Predicted RBP	7.65	□□□□□ -1.18
HSM3	YBR272C	NKP1	Q12493	238 aa		7.65	□□□□□ -1.18
HSM3	YBR272C	BUD14	P27637	709 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	PPH3	P32345	308 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	TCD1	P38756	429 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	NPR2	P39923	615 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	TPM2	P40414	161 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	YJL181W	P46987	611 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	SHE4	P51534	789 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	YNL058C	P53947	316 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	HEH2	Q03281	663 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	UBX5	Q06682	500 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	SLX4	Q12098	748 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	RAD50	P12753	1312 aa		7.64	□□□□□ -1.19
HSM3	YBR272C	RAV1	P47104	1357 aa		7.63	□□□□□ -1.19
HSM3	YBR272C	HMG1	P12683	1054 aa		7.63	□□□□□ -1.19
HSM3	YBR272C	PRP5	P21372	849 aa	Predicted RBP	7.63	□□□□□ -1.19
HSM3	YBR272C	SLX5	P32828	619 aa	Known RBP	7.63	□□□□□ -1.19
HSM3	YBR272C	HXT5	P38695	592 aa		7.63	□□□□□ -1.19
HSM3	YBR272C	MPH1	P40562	993 aa		7.63	□□□□□ -1.19
HSM3	YBR272C	SEC26	P41810	973 aa	Known RBP	7.63	□□□□□ -1.19
HSM3	YBR272C	ADE12	P80210	433 aa	Known RBP	7.63	□□□□□ -1.19
HSM3	YBR272C	CLP1	Q08685	445 aa	Predicted RBP	7.63	□□□□□ -1.19
HSM3	YBR272C	FAR1	P21268	830 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	PWP2	P25635	923 aa	Known RBP	7.62	□□□□□ -1.19
HSM3	YBR272C	HIR2	P32480	875 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	COY1	P34237	679 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	YLF2	P38746	405 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	UBP12	P39538	1254 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	PES4	P39684	611 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	VHR2	P40041	505 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	SLX8	P40072	274 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	SDS3	P40505	327 aa		7.62	□□□□□ -1.19
HSM3	YBR272C	REX2	P54964	269 aa	Known RBP	7.62	□□□□□ -1.19
HSM3	YBR272C	TMA64	Q04600	565 aa	Known RBP	7.62	□□□□□ -1.19
HSM3	YBR272C	YDL121C	Q07541	149 aa		7.62	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 50 ms