RNA–Protein interactions for RNA: YBR265W

TSC10, Transcript of 3-ketosphinganine reductase, yeast

Gene TSC10, Length 963 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSC10	YBR265W	GCD7	P32502	381 aa	Predicted RBP	11.74	□□□□□ -0.53
TSC10	YBR265W	GSM1	P42950	618 aa		11.74	□□□□□ -0.53
TSC10	YBR265W	IRC4	Q03036	179 aa		11.74	□□□□□ -0.53
TSC10	YBR265W	PRP42	Q03776	544 aa	Known RBP	11.74	□□□□□ -0.53
TSC10	YBR265W	PUF6	Q04373	656 aa	Known RBP	11.74	□□□□□ -0.53
TSC10	YBR265W	GAS5	Q08193	484 aa		11.74	□□□□□ -0.53
TSC10	YBR265W	GYP5	Q12344	894 aa		11.74	□□□□□ -0.53
TSC10	YBR265W	NCB2	Q92317	146 aa		11.74	□□□□□ -0.53
TSC10	YBR265W	POM152	P39685	1337 aa		11.74	□□□□□ -0.53
TSC10	YBR265W	JJJ2	P46997	583 aa		11.73	□□□□□ -0.53
TSC10	YBR265W	FIG2	P25653	1609 aa		11.72	□□□□□ -0.53
TSC10	YBR265W	POL32	P47110	350 aa		11.72	□□□□□ -0.53
TSC10	YBR265W	DUR1,2	P32528	1835 aa	Known RBP	11.72	□□□□□ -0.53
TSC10	YBR265W	GAP1	P19145	602 aa	Predicted RBP	11.71	□□□□□ -0.53
TSC10	YBR265W	LCB1	P25045	558 aa	Known RBP	11.71	□□□□□ -0.53
TSC10	YBR265W	RRI2	Q12348	645 aa		11.71	□□□□□ -0.53
TSC10	YBR265W	SEC18	P18759	758 aa	Known RBP	11.7	□□□□□ -0.54
TSC10	YBR265W	VHR2	P40041	505 aa		11.7	□□□□□ -0.54
TSC10	YBR265W	VPS4	P52917	437 aa		11.7	□□□□□ -0.54
TSC10	YBR265W	YGR117C	P53270	476 aa		11.7	□□□□□ -0.54
TSC10	YBR265W	PIF1	P07271	859 aa		11.69	□□□□□ -0.54
TSC10	YBR265W	SLA1	P32790	1244 aa		11.69	□□□□□ -0.54
TSC10	YBR265W	EMP47	P43555	445 aa		11.69	□□□□□ -0.54
TSC10	YBR265W	ACK1	Q07622	623 aa	Predicted RBP	11.69	□□□□□ -0.54
TSC10	YBR265W	ARG82	P07250	355 aa		11.68	□□□□□ -0.54
TSC10	YBR265W	HPR1	P17629	752 aa	Known RBP	11.68	□□□□□ -0.54
TSC10	YBR265W	NMD2	P38798	1089 aa	Known RBP	11.68	□□□□□ -0.54
TSC10	YBR265W	WRS1	Q12109	432 aa	Known RBP	11.68	□□□□□ -0.54
TSC10	YBR265W	ILV3	P39522	585 aa	Known RBP	11.67	□□□□□ -0.54
TSC10	YBR265W	TOS4	Q06266	489 aa		11.67	□□□□□ -0.54
TSC10	YBR265W	RPS7A	P26786	190 aa	Known RBP	11.66	□□□□□ -0.54
TSC10	YBR265W	STV1	P37296	890 aa		11.66	□□□□□ -0.54
TSC10	YBR265W	FPR3	P38911	411 aa	Known RBP	11.66	□□□□□ -0.54
TSC10	YBR265W	PEA2	P40091	420 aa		11.66	□□□□□ -0.54
TSC10	YBR265W	YFH7	P43591	353 aa		11.66	□□□□□ -0.54
TSC10	YBR265W	RRD1	P40454	393 aa	Known RBP	11.65	□□□□□ -0.54
TSC10	YBR265W	YNL193W	P53870	558 aa		11.65	□□□□□ -0.54
TSC10	YBR265W	FLO11	P08640	1367 aa		11.65	□□□□□ -0.55
TSC10	YBR265W	AI2	P03876	854 aa		11.64	□□□□□ -0.55
TSC10	YBR265W	GLO3	P38682	493 aa	Known RBP	11.64	□□□□□ -0.55
TSC10	YBR265W	BDP1	P46678	594 aa		11.64	□□□□□ -0.55
TSC10	YBR265W	OXP1	P28273	1286 aa		11.63	□□□□□ -0.55
TSC10	YBR265W	RPT3	P33298	428 aa	Known RBP	11.63	□□□□□ -0.55
TSC10	YBR265W	CWC15	Q03772	175 aa	Known RBP	11.63	□□□□□ -0.55
TSC10	YBR265W	YIR042C	P40586	236 aa		11.62	□□□□□ -0.55
TSC10	YBR265W	PUS6	P53294	404 aa		11.62	□□□□□ -0.55
TSC10	YBR265W	INM2	Q05533	292 aa		11.62	□□□□□ -0.55
TSC10	YBR265W	RPN7	Q06103	429 aa	Known RBP	11.62	□□□□□ -0.55
TSC10	YBR265W	PDR18	P53756	1333 aa		11.61	□□□□□ -0.55
TSC10	YBR265W	HAL5	P38970	855 aa	Known RBP	11.61	□□□□□ -0.55
TSC10	YBR265W	YGL242C	P53066	181 aa		11.61	□□□□□ -0.55
TSC10	YBR265W	MLC1	P53141	149 aa		11.61	□□□□□ -0.55
TSC10	YBR265W	CBP1	P07252	654 aa		11.6	□□□□□ -0.55
TSC10	YBR265W	MDL2	P33311	773 aa		11.6	□□□□□ -0.55
TSC10	YBR265W	PTK1	P36002	662 aa	Predicted RBP	11.6	□□□□□ -0.55
TSC10	YBR265W	YIL089W	P40500	205 aa		11.6	□□□□□ -0.55
TSC10	YBR265W	APL6	P46682	809 aa		11.59	□□□□□ -0.55
TSC10	YBR265W	NOT3	P06102	836 aa	Known RBP	11.58	□□□□□ -0.56
TSC10	YBR265W	CYB2	P00175	591 aa		11.57	□□□□□ -0.56
TSC10	YBR265W	MTC3	P53077	123 aa		11.57	□□□□□ -0.56
TSC10	YBR265W	TYW1	Q08960	810 aa	Known RBP	11.57	□□□□□ -0.56
TSC10	YBR265W	BOI1	P38041	980 aa	Known RBP	11.56	□□□□□ -0.56
TSC10	YBR265W	ECM21	P38167	1117 aa	Known RBP	11.56	□□□□□ -0.56
TSC10	YBR265W	UTP7	P40055	554 aa	Known RBP	11.56	□□□□□ -0.56
TSC10	YBR265W	YJL171C	P46992	396 aa		11.56	□□□□□ -0.56
TSC10	YBR265W	ECM16	Q04217	1267 aa	Known RBP	11.56	□□□□□ -0.56
TSC10	YBR265W	SNF3	P10870	884 aa		11.55	□□□□□ -0.56
TSC10	YBR265W	GAL2	P13181	574 aa		11.55	□□□□□ -0.56
TSC10	YBR265W	GEF1	P37020	779 aa		11.55	□□□□□ -0.56
TSC10	YBR265W	RFC1	P38630	861 aa	Known RBP	11.55	□□□□□ -0.56
TSC10	YBR265W	NIT1	P40447	199 aa		11.55	□□□□□ -0.56
TSC10	YBR265W	RRT6	P53117	311 aa	Predicted RBP	11.55	□□□□□ -0.56
TSC10	YBR265W	KTR3	P38130	404 aa	Predicted RBP	11.54	□□□□□ -0.56
TSC10	YBR265W	ENP2	P48234	707 aa	Known RBP	11.54	□□□□□ -0.56
TSC10	YBR265W	PIP2	P52960	996 aa		11.54	□□□□□ -0.56
TSC10	YBR265W	ALO1	P54783	526 aa	Known RBP	11.54	□□□□□ -0.56
TSC10	YBR265W	TFC8	Q12308	588 aa		11.54	□□□□□ -0.56
TSC10	YBR265W	HO	P09932	586 aa		11.52	□□□□□ -0.57
TSC10	YBR265W	NPL4	P33755	580 aa		11.52	□□□□□ -0.57
TSC10	YBR265W	CDC27	P38042	758 aa		11.52	□□□□□ -0.57
TSC10	YBR265W	PBY1	P38254	753 aa		11.52	□□□□□ -0.57
TSC10	YBR265W	ETP1	P38748	585 aa	Known RBP	11.52	□□□□□ -0.57
TSC10	YBR265W	CDC16	P09798	840 aa		11.51	□□□□□ -0.57
TSC10	YBR265W	GRX7	P38068	203 aa		11.51	□□□□□ -0.57
TSC10	YBR265W	BSD2	P38356	321 aa		11.51	□□□□□ -0.57
TSC10	YBR265W	BRE1	Q07457	700 aa	Known RBP	11.51	□□□□□ -0.57
TSC10	YBR265W	CSR2	Q12734	1121 aa		11.51	□□□□□ -0.57
TSC10	YBR265W	OSH3	P38713	996 aa	Known RBP	11.5	□□□□□ -0.57
TSC10	YBR265W	SSP1	P38871	571 aa		11.5	□□□□□ -0.57
TSC10	YBR265W	EPS1	P40557	701 aa		11.5	□□□□□ -0.57
TSC10	YBR265W	NOP2	P40991	618 aa	Known RBP	11.5	□□□□□ -0.57
TSC10	YBR265W	IRC8	P47046	822 aa		11.49	□□□□□ -0.57
TSC10	YBR265W	RMD1	Q03441	430 aa		11.49	□□□□□ -0.57
TSC10	YBR265W	NKP2	Q06162	153 aa		11.49	□□□□□ -0.57
TSC10	YBR265W	GSC2	P40989	1895 aa		11.49	□□□□□ -0.57
TSC10	YBR265W	PMA1	P05030	918 aa	Known RBP	11.48	□□□□□ -0.57
TSC10	YBR265W	ADP1	P25371	1049 aa		11.48	□□□□□ -0.57
TSC10	YBR265W	TPS3	P38426	1054 aa	Known RBP	11.48	□□□□□ -0.57
TSC10	YBR265W	PNT1	P38969	423 aa		11.48	□□□□□ -0.57
TSC10	YBR265W	YMR147W	P40218	223 aa	Known RBP	11.48	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms