RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W TY2B-OR1Q12113 1770 aa1.87□□□□□ -2.11
VPS15YBR097W TY2B-DR1Q12472 1770 aa1.87□□□□□ -2.11
VPS15YBR097W TY2B-OR2Q12501 1770 aa1.87□□□□□ -2.11
VPS15YBR097W RPP2BP02400 110 aaKnown RBP1.87□□□□□ -2.11
VPS15YBR097W SUP35P05453 685 aaKnown RBP1.87□□□□□ -2.11
VPS15YBR097W TFC4P33339 1025 aa1.87□□□□□ -2.11
VPS15YBR097W UIP5P36137 443 aa1.87□□□□□ -2.11
VPS15YBR097W YBR238CP38330 731 aaKnown RBP1.87□□□□□ -2.11
VPS15YBR097W RRF1P38771 230 aa1.87□□□□□ -2.11
VPS15YBR097W DSN1P40568 576 aa1.87□□□□□ -2.11
VPS15YBR097W MAD1P40957 749 aa1.87□□□□□ -2.11
VPS15YBR097W FYV8P46949 817 aaKnown RBP1.87□□□□□ -2.11
VPS15YBR097W MTR4P47047 1073 aaKnown RBP1.87□□□□□ -2.11
VPS15YBR097W CTF4Q01454 927 aa1.87□□□□□ -2.11
VPS15YBR097W YML108WQ03759 105 aa1.87□□□□□ -2.11
VPS15YBR097W VPS64Q03944 604 aa1.87□□□□□ -2.11
VPS15YBR097W GSC2P40989 1895 aa1.86□□□□□ -2.11
VPS15YBR097W CDC16P09798 840 aa1.86□□□□□ -2.11
VPS15YBR097W PRP4P20053 465 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W CLB3P24870 427 aa1.86□□□□□ -2.11
VPS15YBR097W CDC48P25694 835 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W COY1P34237 679 aa1.86□□□□□ -2.11
VPS15YBR097W RTT105P40063 208 aa1.86□□□□□ -2.11
VPS15YBR097W EMP65P40085 556 aa1.86□□□□□ -2.11
VPS15YBR097W FAF1P40546 346 aaPredicted RBP1.86□□□□□ -2.11
VPS15YBR097W HOS2P53096 452 aaPredicted RBP1.86□□□□□ -2.11
VPS15YBR097W SLK19Q08581 821 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W CLN2P20438 545 aa1.86□□□□□ -2.11
VPS15YBR097W SPC110P32380 944 aa1.86□□□□□ -2.11
VPS15YBR097W SET1P38827 1080 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W IES1P43579 692 aa1.86□□□□□ -2.11
VPS15YBR097W IBD2P53892 351 aa1.86□□□□□ -2.11
VPS15YBR097W DMA2P53924 522 aa1.86□□□□□ -2.11
VPS15YBR097W ULP1Q02724 621 aa1.86□□□□□ -2.11
VPS15YBR097W RRP6Q12149 733 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W CHD1P32657 1468 aa1.86□□□□□ -2.11
VPS15YBR097W MRP7P12687 371 aa1.86□□□□□ -2.11
VPS15YBR097W CDC23P16522 626 aa1.86□□□□□ -2.11
VPS15YBR097W VAM7P32912 316 aa1.86□□□□□ -2.11
VPS15YBR097W XRS2P33301 854 aa1.86□□□□□ -2.11
VPS15YBR097W VPS51P36116 164 aa1.86□□□□□ -2.11
VPS15YBR097W RSC30P38781 883 aa1.86□□□□□ -2.11
VPS15YBR097W KEL1P38853 1164 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W HAL5P38970 855 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W CHZ1P40019 153 aaPredicted RBP1.86□□□□□ -2.11
VPS15YBR097W YFL034WP43564 1073 aa1.86□□□□□ -2.11
VPS15YBR097W STU2P46675 888 aa1.86□□□□□ -2.11
VPS15YBR097W PSD2P53037 1138 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W RKM2Q03942 479 aa1.86□□□□□ -2.11
VPS15YBR097W RRP9Q06506 573 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W UTP4Q06679 776 aaKnown RBP1.86□□□□□ -2.11
VPS15YBR097W ATP14Q12349 124 aa1.86□□□□□ -2.11
VPS15YBR097W NBL1Q3E7Y6 73 aa1.86□□□□□ -2.11
VPS15YBR097W APM4Q99186 491 aa1.86□□□□□ -2.11
VPS15YBR097W NUP188P52593 1655 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W PAN1P32521 1480 aa1.85□□□□□ -2.11
VPS15YBR097W GRR1P24814 1151 aa1.85□□□□□ -2.11
VPS15YBR097W CDC60P26637 1090 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W SMC1P32908 1225 aa1.85□□□□□ -2.11
VPS15YBR097W JNM1P36224 373 aa1.85□□□□□ -2.11
VPS15YBR097W RKM3P38222 552 aa1.85□□□□□ -2.11
VPS15YBR097W SPC72P39723 622 aa1.85□□□□□ -2.11
VPS15YBR097W BUB1P41695 1021 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
VPS15YBR097W ACF4P47129 309 aa1.85□□□□□ -2.11
VPS15YBR097W SHE10P53075 577 aa1.85□□□□□ -2.11
VPS15YBR097W HOP2P53187 214 aa1.85□□□□□ -2.11
VPS15YBR097W PTA1Q01329 785 aaPredicted RBP1.85□□□□□ -2.11
VPS15YBR097W BRE1Q07457 700 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W NOP12Q08208 459 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W PPM2Q08282 695 aa1.85□□□□□ -2.11
VPS15YBR097W YOL098CQ12496 1037 aa1.85□□□□□ -2.11
VPS15YBR097W YEL077CQ3E7X8 1277 aa1.85□□□□□ -2.11
VPS15YBR097W CNS1P33313 385 aa1.85□□□□□ -2.11
VPS15YBR097W PEA2P40091 420 aa1.85□□□□□ -2.11
VPS15YBR097W TFG1P41895 735 aaPredicted RBP1.85□□□□□ -2.11
VPS15YBR097W SGM1P47166 707 aa1.85□□□□□ -2.11
VPS15YBR097W VMA10P48836 114 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W DID2P69771 204 aa1.85□□□□□ -2.11
VPS15YBR097W RSA3Q05942 220 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W TCB1Q12466 1186 aa1.85□□□□□ -2.11
VPS15YBR097W YIL002W-AQ3E7Z5 69 aa1.85□□□□□ -2.11
VPS15YBR097W THS1P04801 734 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W KIN3P22209 435 aa1.85□□□□□ -2.11
VPS15YBR097W GCD6P32501 712 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W YKR078WP36158 585 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W RTR1P40084 226 aaPredicted RBP1.85□□□□□ -2.11
VPS15YBR097W RPT2P40327 437 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W YKE2P52553 114 aa1.85□□□□□ -2.11
VPS15YBR097W YPL225WQ08971 146 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W RTC5Q12108 567 aaKnown RBP1.85□□□□□ -2.11
VPS15YBR097W OSH2Q12451 1283 aa1.85□□□□□ -2.11
VPS15YBR097W CYC8P14922 966 aa1.84□□□□□ -2.11
VPS15YBR097W MAK11P20484 414 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W SIR1P21691 654 aa1.84□□□□□ -2.11
VPS15YBR097W SWC3P31376 625 aa1.84□□□□□ -2.11
VPS15YBR097W SMI1P32566 505 aa1.84□□□□□ -2.11
VPS15YBR097W BEM3P32873 1128 aa1.84□□□□□ -2.11
VPS15YBR097W BLI1P35727 113 aa1.84□□□□□ -2.11
VPS15YBR097W PAM1P37304 830 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W KTR4P38131 464 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms