RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeast

Gene HHF1, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHF1	YBR009C	BOI1	P38041	980 aa	Known RBP	4.24	□□□□□ -1.73
HHF1	YBR009C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
HHF1	YBR009C	MTO1	P53070	669 aa		4.24	□□□□□ -1.73
HHF1	YBR009C	APP1	P53933	587 aa		4.24	□□□□□ -1.73
HHF1	YBR009C	RMD1	Q03441	430 aa		4.24	□□□□□ -1.73
HHF1	YBR009C	ESF1	Q06344	628 aa	Known RBP	4.24	□□□□□ -1.73
HHF1	YBR009C	MET32	Q12041	191 aa		4.24	□□□□□ -1.73
HHF1	YBR009C	SPT2	P06843	333 aa	Predicted RBP	4.23	□□□□□ -1.73
HHF1	YBR009C	RPS26A	P39938	119 aa	Known RBP	4.23	□□□□□ -1.73
HHF1	YBR009C	RPS26B	P39939	119 aa	Known RBP	4.23	□□□□□ -1.73
HHF1	YBR009C	DAK2	P43550	591 aa		4.23	□□□□□ -1.73
HHF1	YBR009C	APL6	P46682	809 aa		4.23	□□□□□ -1.73
HHF1	YBR009C	UTP13	Q05946	817 aa	Known RBP	4.23	□□□□□ -1.73
HHF1	YBR009C	TRS33	Q99394	268 aa		4.23	□□□□□ -1.73
HHF1	YBR009C	MET6	P05694	767 aa	Known RBP	4.22	□□□□□ -1.73
HHF1	YBR009C	SUV3	P32580	737 aa		4.22	□□□□□ -1.73
HHF1	YBR009C	MRT4	P33201	236 aa	Known RBP	4.22	□□□□□ -1.73
HHF1	YBR009C	ASH1	P34233	588 aa		4.22	□□□□□ -1.73
HHF1	YBR009C	RTT106	P40161	455 aa		4.22	□□□□□ -1.73
HHF1	YBR009C	SPR3	P41901	512 aa		4.22	□□□□□ -1.73
HHF1	YBR009C	ZDS1	P50111	915 aa	Known RBP	4.22	□□□□□ -1.73
HHF1	YBR009C	YGL081W	P53156	320 aa		4.22	□□□□□ -1.73
HHF1	YBR009C	CWC24	P53769	259 aa		4.22	□□□□□ -1.73
HHF1	YBR009C	TAT2	P38967	592 aa		4.21	□□□□□ -1.74
HHF1	YBR009C	UBP12	P39538	1254 aa		4.21	□□□□□ -1.74
HHF1	YBR009C	NUP82	P40368	713 aa		4.21	□□□□□ -1.74
HHF1	YBR009C	EMW1	P42842	904 aa	Known RBP	4.21	□□□□□ -1.74
HHF1	YBR009C	HUL5	P53119	910 aa		4.21	□□□□□ -1.74
HHF1	YBR009C	HST3	P53687	447 aa		4.21	□□□□□ -1.74
HHF1	YBR009C	MDG1	P53885	366 aa		4.21	□□□□□ -1.74
HHF1	YBR009C	AFT1	P22149	690 aa		4.2	□□□□□ -1.74
HHF1	YBR009C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
HHF1	YBR009C	GRX1	P25373	110 aa	Known RBP	4.2	□□□□□ -1.74
HHF1	YBR009C	PET112	P33893	541 aa		4.2	□□□□□ -1.74
HHF1	YBR009C	YEN1	P40028	759 aa		4.2	□□□□□ -1.74
HHF1	YBR009C	NOP2	P40991	618 aa	Known RBP	4.2	□□□□□ -1.74
HHF1	YBR009C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
HHF1	YBR009C	CYC8	P14922	966 aa		4.19	□□□□□ -1.74
HHF1	YBR009C	RPB10	P22139	70 aa		4.19	□□□□□ -1.74
HHF1	YBR009C	GCD6	P32501	712 aa	Known RBP	4.19	□□□□□ -1.74
HHF1	YBR009C	TIM23	P32897	222 aa		4.19	□□□□□ -1.74
HHF1	YBR009C	MNR2	P35724	969 aa		4.19	□□□□□ -1.74
HHF1	YBR009C	GRX7	P38068	203 aa		4.19	□□□□□ -1.74
HHF1	YBR009C	HAL5	P38970	855 aa	Known RBP	4.19	□□□□□ -1.74
HHF1	YBR009C	MSH4	P40965	878 aa	Predicted RBP	4.19	□□□□□ -1.74
HHF1	YBR009C	ATG20	Q07528	640 aa		4.19	□□□□□ -1.74
HHF1	YBR009C	PPM2	Q08282	695 aa		4.19	□□□□□ -1.74
HHF1	YBR009C	UGA3	P26370	528 aa		4.18	□□□□□ -1.74
HHF1	YBR009C	YBL086C	P38177	466 aa		4.18	□□□□□ -1.74
HHF1	YBR009C	AIM9	P40053	627 aa	Known RBP	4.18	□□□□□ -1.74
HHF1	YBR009C	YGR122W	P53272	402 aa		4.18	□□□□□ -1.74
HHF1	YBR009C	UTP14	Q04500	899 aa	Known RBP	4.18	□□□□□ -1.74
HHF1	YBR009C	PHO8	P11491	566 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	RAD4	P14736	754 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	UBP1	P25037	809 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	ISC10	P32645	267 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	MKS1	P34072	584 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	VPS35	P34110	944 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	ENP1	P38333	483 aa	Known RBP	4.17	□□□□□ -1.74
HHF1	YBR009C	YFL034W	P43564	1073 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	CWH41	P53008	833 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	UFD2	P54860	961 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	ECM16	Q04217	1267 aa	Known RBP	4.17	□□□□□ -1.74
HHF1	YBR009C	ISR1	Q06098	443 aa	Known RBP	4.17	□□□□□ -1.74
HHF1	YBR009C	TOS4	Q06266	489 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	YDL121C	Q07541	149 aa		4.17	□□□□□ -1.74
HHF1	YBR009C	RAD2	P07276	1031 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	PRI2	P20457	528 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	SRM1	P21827	482 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	FBP26	P32604	452 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	SEC6	P32844	805 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	NTH2	P35172	780 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	YBR197C	P38306	217 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	CRP1	P38845	465 aa	Known RBP	4.16	□□□□□ -1.74
HHF1	YBR009C	BRE2	P43132	505 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	TIM54	P47045	478 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	YJR115W	P47152	169 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	MSB3	P48566	633 aa	Predicted RBP	4.16	□□□□□ -1.74
HHF1	YBR009C	GCR2	Q01722	534 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	FOX2	Q02207	900 aa	Known RBP	4.16	□□□□□ -1.74
HHF1	YBR009C	GDE1	Q02979	1223 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	DFG5	Q05031	458 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	BDS1	Q08347	646 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	APC11	Q12157	165 aa		4.16	□□□□□ -1.74
HHF1	YBR009C	CYT1	P07143	309 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	KAR1	P11927	433 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	GAL11	P19659	1081 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	NGR1	P32831	672 aa	Known RBP	4.15	□□□□□ -1.75
HHF1	YBR009C	FAA4	P47912	694 aa	Known RBP	4.15	□□□□□ -1.75
HHF1	YBR009C	DNM1	P54861	757 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	NAN1	Q02931	896 aa	Known RBP	4.15	□□□□□ -1.75
HHF1	YBR009C	ISU1	Q03020	165 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	TDA5	Q06417	326 aa	Known RBP	4.15	□□□□□ -1.75
HHF1	YBR009C	HDA3	Q06623	655 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	OXR1	Q08952	273 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	YLR125W	Q12138	136 aa		4.15	□□□□□ -1.75
HHF1	YBR009C	HXK1	P04806	485 aa	Known RBP	4.14	□□□□□ -1.75
HHF1	YBR009C	RPA135	P22138	1203 aa	Known RBP	4.14	□□□□□ -1.75
HHF1	YBR009C	THI4	P32318	326 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	KTR2	P33550	425 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms