RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTA1	YAL043C	CTF18	P49956	741 aa		4.75	□□□□□ -1.65
PTA1	YAL043C	RPN12	P32496	274 aa		4.75	□□□□□ -1.65
PTA1	YAL043C	MRPS35	P53292	345 aa		4.75	□□□□□ -1.65
PTA1	YAL043C	RRP5	Q05022	1729 aa	Known RBP	4.74	□□□□□ -1.65
PTA1	YAL043C	OSW7	P43611	510 aa		4.74	□□□□□ -1.65
PTA1	YAL043C	ADE16	P54113	591 aa	Known RBP	4.74	□□□□□ -1.65
PTA1	YAL043C	TIM50	Q02776	476 aa		4.74	□□□□□ -1.65
PTA1	YAL043C	TCB1	Q12466	1186 aa		4.74	□□□□□ -1.65
PTA1	YAL043C	NCB2	Q92317	146 aa		4.74	□□□□□ -1.65
PTA1	YAL043C	AAP1	P37898	856 aa	Known RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	KTR3	P38130	404 aa	Predicted RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	ECM21	P38167	1117 aa	Known RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	PBY1	P38254	753 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	CIC1	P38779	376 aa	Known RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	ALO1	P54783	526 aa	Known RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	INP54	Q08227	384 aa	Known RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	RPL19A	P0CX82	189 aa	Known RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	RPL19B	P0CX83	189 aa	Predicted RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	FRS2	P15625	503 aa	Known RBP	4.73	□□□□□ -1.65
PTA1	YAL043C	UGA3	P26370	528 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	IMP2'	P32351	346 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	TCB2	P48231	1178 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	HAP5	Q02516	242 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	SGD1	Q06132	899 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	PEX19	Q07418	342 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	YIL177C	P40434	1758 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	YJL225C	P40889	1758 aa		4.73	□□□□□ -1.65
PTA1	YAL043C	GCD7	P32502	381 aa	Predicted RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	STM1	P39015	273 aa	Known RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	YMR147W	P40218	223 aa	Known RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	RSM25	P40496	264 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	YGL082W	P53155	381 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	ESF1	Q06344	628 aa	Known RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	ROM2	P51862	1356 aa	Known RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	TOP1	P04786	769 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	CDC16	P09798	840 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	MBR1	P23493	339 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	SPB4	P25808	606 aa	Predicted RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	PRX1	P34227	261 aa	Known RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	SAP30	P38429	201 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	UBP12	P39538	1254 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	YBP2	P53169	641 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	HST1	P53685	503 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	MEC3	Q02574	474 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	YDL129W	Q07555	291 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	TUM1	Q08686	304 aa	Known RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	SWI1	P09547	1314 aa		4.72	□□□□□ -1.65
PTA1	YAL043C	SSK22	P25390	1331 aa	Predicted RBP	4.72	□□□□□ -1.65
PTA1	YAL043C	TY4B-H	P0C2J7	1802 aa		4.71	□□□□□ -1.65
PTA1	YAL043C	TY4B-J	P47024	1803 aa		4.71	□□□□□ -1.65
PTA1	YAL043C	BDH2	P39713	417 aa		4.71	□□□□□ -1.65
PTA1	YAL043C	NOC2	P39744	710 aa	Known RBP	4.71	□□□□□ -1.65
PTA1	YAL043C	FYV10	P40492	516 aa		4.71	□□□□□ -1.65
PTA1	YAL043C	EPL1	P43572	832 aa		4.71	□□□□□ -1.65
PTA1	YAL043C	YDR306C	Q06640	478 aa		4.71	□□□□□ -1.65
PTA1	YAL043C	HCA4	P20448	770 aa	Known RBP	4.71	□□□□□ -1.66
PTA1	YAL043C	OSM1	P21375	501 aa	Known RBP	4.71	□□□□□ -1.66
PTA1	YAL043C	SOL3	P38858	249 aa		4.71	□□□□□ -1.66
PTA1	YAL043C	ATG13	Q06628	738 aa		4.71	□□□□□ -1.66
PTA1	YAL043C	CPA2	P03965	1118 aa	Known RBP	4.7	□□□□□ -1.66
PTA1	YAL043C	RDS1	P25611	832 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	MRPL10	P36520	322 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	CST6	P40535	587 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	PEX14	P53112	341 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	APP1	P53933	587 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	DNM1	P54861	757 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	ESC2	Q06340	456 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	RRP43	P25359	394 aa	Predicted RBP	4.7	□□□□□ -1.66
PTA1	YAL043C	SER1	P33330	395 aa	Known RBP	4.7	□□□□□ -1.66
PTA1	YAL043C	DEF1	P35732	738 aa	Known RBP	4.7	□□□□□ -1.66
PTA1	YAL043C	YGL242C	P53066	181 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	SRC1	Q03707	834 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	RPN7	Q06103	429 aa	Known RBP	4.7	□□□□□ -1.66
PTA1	YAL043C	PSH1	Q12161	406 aa		4.7	□□□□□ -1.66
PTA1	YAL043C	NOP58	Q12499	511 aa	Known RBP	4.7	□□□□□ -1.66
PTA1	YAL043C	KEX1	P09620	729 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	CYC8	P14922	966 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	YKL133C	P36066	463 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	YER130C	P39959	443 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	TPM2	P40414	161 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	YNL193W	P53870	558 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	PML39	Q03760	334 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	BRE1	Q07457	700 aa	Known RBP	4.69	□□□□□ -1.66
PTA1	YAL043C	RFC5	P38251	354 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	AIM9	P40053	627 aa	Known RBP	4.69	□□□□□ -1.66
PTA1	YAL043C	CCT5	P40413	562 aa	Known RBP	4.69	□□□□□ -1.66
PTA1	YAL043C	YGR273C	P53329	174 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	YMR196W	Q04336	1088 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	ENT1	Q12518	454 aa		4.69	□□□□□ -1.66
PTA1	YAL043C	MPH3	P0CE00	602 aa		4.68	□□□□□ -1.66
PTA1	YAL043C	KTR1	P27810	393 aa	Known RBP	4.68	□□□□□ -1.66
PTA1	YAL043C	MLC1	P53141	149 aa		4.68	□□□□□ -1.66
PTA1	YAL043C	RMT2	Q03305	412 aa		4.68	□□□□□ -1.66
PTA1	YAL043C	YRF1-2	P40105	1681 aa		4.68	□□□□□ -1.66
PTA1	YAL043C	HSP82	P02829	709 aa	Known RBP	4.68	□□□□□ -1.66
PTA1	YAL043C	AI4	P03878	556 aa		4.68	□□□□□ -1.66
PTA1	YAL043C	NPR3	P38742	1146 aa		4.68	□□□□□ -1.66
PTA1	YAL043C	GPA1	P08539	472 aa		4.67	□□□□□ -1.66
PTA1	YAL043C	RAD26	P40352	1085 aa		4.67	□□□□□ -1.66
PTA1	YAL043C	UBP16	Q02863	499 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms