RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
SPIN3-219ENST00000639053 SIRT1Q96EB6 747 aa20.97■□□□□ 0.95
SPIN3-219ENST00000639053 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
SPIN3-219ENST00000639053 TULP4Q9NRJ4 1543 aa20.97■□□□□ 0.95
SPIN3-219ENST00000639053 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
SPIN3-219ENST00000639053 PIK3R4Q99570 1358 aa20.94■□□□□ 0.94
SPIN3-219ENST00000639053 EVC2Q86UK5 1308 aa20.94■□□□□ 0.94
SPIN3-219ENST00000639053 XRN1Q8IZH2 1706 aaKnown RBP20.93■□□□□ 0.94
SPIN3-219ENST00000639053 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
SPIN3-219ENST00000639053 PTCH1Q13635 1447 aa20.9■□□□□ 0.94
SPIN3-219ENST00000639053 KCNA6P17658 529 aa20.9■□□□□ 0.94
SPIN3-219ENST00000639053 CABP2Q9NPB3 220 aa20.9■□□□□ 0.94
SPIN3-219ENST00000639053 MYOM1P52179 1685 aa20.89■□□□□ 0.94
SPIN3-219ENST00000639053 CHD2O14647 1828 aaKnown RBP20.88■□□□□ 0.93
SPIN3-219ENST00000639053 CDK19Q9BWU1 502 aa20.87■□□□□ 0.93
SPIN3-219ENST00000639053 SRPK2P78362 688 aaKnown RBP20.87■□□□□ 0.93
SPIN3-219ENST00000639053 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
SPIN3-219ENST00000639053 PANK3Q9H999 370 aa20.87■□□□□ 0.93
SPIN3-219ENST00000639053 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.86■□□□□ 0.93
SPIN3-219ENST00000639053 STRCQ7RTU9 1775 aa20.85■□□□□ 0.93
SPIN3-219ENST00000639053 WASLO00401 505 aaPredicted RBP20.83■□□□□ 0.93
SPIN3-219ENST00000639053 TMC1Q8TDI8 760 aa20.83■□□□□ 0.93
SPIN3-219ENST00000639053 SLC12A5Q9H2X9 1139 aa20.82■□□□□ 0.92
SPIN3-219ENST00000639053 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
SPIN3-219ENST00000639053 ADGRB2O60241 1585 aa20.81■□□□□ 0.92
SPIN3-219ENST00000639053 NWD1Q149M9 1564 aa20.81■□□□□ 0.92
SPIN3-219ENST00000639053 ATAD2Q6PL18 1390 aa20.8■□□□□ 0.92
SPIN3-219ENST00000639053 CNGB1Q14028 1251 aaPredicted RBP20.79■□□□□ 0.92
SPIN3-219ENST00000639053 RBM33Q96EV2 1170 aaKnown RBP20.78■□□□□ 0.92
SPIN3-219ENST00000639053 PRKRIP1Q9H875 184 aaPredicted RBP20.76■□□□□ 0.91
SPIN3-219ENST00000639053 CARD14Q9BXL6 1004 aa20.75■□□□□ 0.91
SPIN3-219ENST00000639053 NINLQ9Y2I6 1382 aa20.75■□□□□ 0.91
SPIN3-219ENST00000639053 NUDT16Q96DE0 195 aaKnown RBP20.74■□□□□ 0.91
SPIN3-219ENST00000639053 PRR36Q9H6K5 1346 aa20.74■□□□□ 0.91
SPIN3-219ENST00000639053 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
SPIN3-219ENST00000639053 STRCP1A6NGW2 1772 aa20.73■□□□□ 0.91
SPIN3-219ENST00000639053 PROSER2Q86WR7 435 aaPredicted RBP20.73■□□□□ 0.91
SPIN3-219ENST00000639053 CABP1Q9NZU7 370 aa20.73■□□□□ 0.91
SPIN3-219ENST00000639053 NKTRP30414 1462 aaKnown RBP20.73■□□□□ 0.91
SPIN3-219ENST00000639053 ATP7BP35670 1465 aa20.73■□□□□ 0.91
SPIN3-219ENST00000639053 NUTM2FA1L443 756 aa20.72■□□□□ 0.91
SPIN3-219ENST00000639053 NALCNQ8IZF0 1738 aa20.72■□□□□ 0.91
SPIN3-219ENST00000639053 ANKRD36BQ8N2N9 1353 aa20.72■□□□□ 0.91
SPIN3-219ENST00000639053 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
SPIN3-219ENST00000639053 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
SPIN3-219ENST00000639053 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
SPIN3-219ENST00000639053 ADGRL3Q9HAR2 1447 aa20.7■□□□□ 0.9
SPIN3-219ENST00000639053 CD163L1Q9NR16 1453 aa20.7■□□□□ 0.9
SPIN3-219ENST00000639053 A0A1W2PP64 1363 aa20.69■□□□□ 0.9
SPIN3-219ENST00000639053 AMER1Q5JTC6 1135 aaPredicted RBP20.69■□□□□ 0.9
SPIN3-219ENST00000639053 CCDC61Q9Y6R9 512 aa20.69■□□□□ 0.9
SPIN3-219ENST00000639053 KTN1Q86UP2 1357 aaKnown RBP20.69■□□□□ 0.9
SPIN3-219ENST00000639053 C14orf37Q86TY3 774 aa20.68■□□□□ 0.9
SPIN3-219ENST00000639053 TERF2IPQ9NYB0 399 aa20.68■□□□□ 0.9
SPIN3-219ENST00000639053 USP32Q8NFA0 1604 aa20.68■□□□□ 0.9
SPIN3-219ENST00000639053 CDC42BPGQ6DT37 1551 aa20.67■□□□□ 0.9
SPIN3-219ENST00000639053 FMN2Q9NZ56 1722 aa20.66■□□□□ 0.9
SPIN3-219ENST00000639053 ZNF335Q9H4Z2 1342 aaPredicted RBP20.66■□□□□ 0.9
SPIN3-219ENST00000639053 HDGFL2Q7Z4V5 671 aaPredicted RBP20.66■□□□□ 0.9
SPIN3-219ENST00000639053 TOPAZ1Q8N9V7 1692 aa20.66■□□□□ 0.9
SPIN3-219ENST00000639053 RALBP1Q15311 655 aa20.65■□□□□ 0.9
SPIN3-219ENST00000639053 DMRT2Q9Y5R5 561 aa20.65■□□□□ 0.9
SPIN3-219ENST00000639053 TMEM94Q12767 1356 aa20.65■□□□□ 0.9
SPIN3-219ENST00000639053 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
SPIN3-219ENST00000639053 NPC1L1Q9UHC9 1359 aa20.64■□□□□ 0.89
SPIN3-219ENST00000639053 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
SPIN3-219ENST00000639053 CPSF1Q10570 1443 aaKnown RBP20.63■□□□□ 0.89
SPIN3-219ENST00000639053 ANKARQ7Z5J8 1434 aa20.63■□□□□ 0.89
SPIN3-219ENST00000639053 PLEKHG3A1L390 1219 aa20.62■□□□□ 0.89
SPIN3-219ENST00000639053 CCDC184Q52MB2 194 aa20.62■□□□□ 0.89
SPIN3-219ENST00000639053 RGPD8O14715 1765 aaPredicted RBP20.6■□□□□ 0.89
SPIN3-219ENST00000639053 CGNL1Q0VF96 1302 aa20.6■□□□□ 0.89
SPIN3-219ENST00000639053 MYBBP1AQ9BQG0 1328 aaKnown RBP20.6■□□□□ 0.89
SPIN3-219ENST00000639053 ITSN1Q15811 1721 aa20.59■□□□□ 0.89
SPIN3-219ENST00000639053 C19orf44Q9H6X5 657 aa20.59■□□□□ 0.89
SPIN3-219ENST00000639053 NCOA3Q9Y6Q9 1424 aa20.59■□□□□ 0.89
SPIN3-219ENST00000639053 ACEP12821 1306 aa20.59■□□□□ 0.89
SPIN3-219ENST00000639053 PMFBP1Q8TBY8 1022 aa20.59■□□□□ 0.89
SPIN3-219ENST00000639053 LRRC7Q96NW7 1537 aa20.58■□□□□ 0.89
SPIN3-219ENST00000639053 AKAP12Q02952 1782 aa20.57■□□□□ 0.88
SPIN3-219ENST00000639053 MON2Q7Z3U7 1717 aa20.56■□□□□ 0.88
SPIN3-219ENST00000639053 EDC4Q6P2E9 1401 aaKnown RBP20.56■□□□□ 0.88
SPIN3-219ENST00000639053 XIRP1Q702N8 1843 aaKnown RBP20.56■□□□□ 0.88
SPIN3-219ENST00000639053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.55■□□□□ 0.88
SPIN3-219ENST00000639053 ZNF692Q9BU19 519 aaPredicted RBP20.55■□□□□ 0.88
SPIN3-219ENST00000639053 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
SPIN3-219ENST00000639053 FYB1O15117 783 aa20.54■□□□□ 0.88
SPIN3-219ENST00000639053 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
SPIN3-219ENST00000639053 GGNBP2Q9H3C7 697 aa20.54■□□□□ 0.88
SPIN3-219ENST00000639053 POLR3AO14802 1390 aaPredicted RBP20.53■□□□□ 0.88
SPIN3-219ENST00000639053 NSD2O96028 1365 aa20.53■□□□□ 0.88
SPIN3-219ENST00000639053 ATF3P18847 181 aa20.53■□□□□ 0.88
SPIN3-219ENST00000639053 PPP2R1AP30153 589 aa20.53■□□□□ 0.88
SPIN3-219ENST00000639053 MORC1Q86VD1 984 aa20.53■□□□□ 0.88
SPIN3-219ENST00000639053 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
SPIN3-219ENST00000639053 NLRP13Q86W25 1043 aa20.52■□□□□ 0.88
SPIN3-219ENST00000639053 PHF8Q9UPP1 1060 aa20.52■□□□□ 0.88
SPIN3-219ENST00000639053 USP6P35125 1406 aa20.52■□□□□ 0.88
SPIN3-219ENST00000639053 DCCP43146 1447 aa20.52■□□□□ 0.88
SPIN3-219ENST00000639053 MSH6P52701 1360 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms