RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-215ENST00000635137 MED14O60244 1454 aa17.1■□□□□ 0.33
PATJ-215ENST00000635137 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.33
PATJ-215ENST00000635137 NINLQ9Y2I6 1382 aa17.08■□□□□ 0.33
PATJ-215ENST00000635137 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
PATJ-215ENST00000635137 MYOM1P52179 1685 aa17.07■□□□□ 0.32
PATJ-215ENST00000635137 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
PATJ-215ENST00000635137 SLC26A8Q96RN1 970 aa17.07■□□□□ 0.32
PATJ-215ENST00000635137 CPS1P31327 1500 aa17.07■□□□□ 0.32
PATJ-215ENST00000635137 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
PATJ-215ENST00000635137 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
PATJ-215ENST00000635137 TULP4Q9NRJ4 1543 aa17.05■□□□□ 0.32
PATJ-215ENST00000635137 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
PATJ-215ENST00000635137 WAPLQ7Z5K2 1190 aa17.04■□□□□ 0.32
PATJ-215ENST00000635137 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
PATJ-215ENST00000635137 KDM4FA0A1W2PPD8 638 aa17.03■□□□□ 0.32
PATJ-215ENST00000635137 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
PATJ-215ENST00000635137 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
PATJ-215ENST00000635137 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
PATJ-215ENST00000635137 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
PATJ-215ENST00000635137 MRS2Q9HD23 443 aa17.01■□□□□ 0.31
PATJ-215ENST00000635137 PARD3Q8TEW0 1356 aa17.01■□□□□ 0.31
PATJ-215ENST00000635137 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
PATJ-215ENST00000635137 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
PATJ-215ENST00000635137 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
PATJ-215ENST00000635137 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
PATJ-215ENST00000635137 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
PATJ-215ENST00000635137 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
PATJ-215ENST00000635137 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
PATJ-215ENST00000635137 ROBO2Q9HCK4 1378 aa16.98■□□□□ 0.31
PATJ-215ENST00000635137 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
PATJ-215ENST00000635137 NPHP4O75161 1426 aaPredicted RBP16.98■□□□□ 0.31
PATJ-215ENST00000635137 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
PATJ-215ENST00000635137 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
PATJ-215ENST00000635137 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
PATJ-215ENST00000635137 PTPRUQ92729 1446 aa16.97■□□□□ 0.31
PATJ-215ENST00000635137 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
PATJ-215ENST00000635137 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
PATJ-215ENST00000635137 CHD2O14647 1828 aaKnown RBP16.95■□□□□ 0.3
PATJ-215ENST00000635137 CARD14Q9BXL6 1004 aa16.95■□□□□ 0.3
PATJ-215ENST00000635137 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
PATJ-215ENST00000635137 ADGRB2O60241 1585 aa16.95■□□□□ 0.3
PATJ-215ENST00000635137 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
PATJ-215ENST00000635137 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
PATJ-215ENST00000635137 NSD2O96028 1365 aa16.93■□□□□ 0.3
PATJ-215ENST00000635137 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
PATJ-215ENST00000635137 NUDT16Q96DE0 195 aaKnown RBP16.91■□□□□ 0.3
PATJ-215ENST00000635137 ATP7BP35670 1465 aa16.91■□□□□ 0.3
PATJ-215ENST00000635137 KCNA6P17658 529 aa16.91■□□□□ 0.3
PATJ-215ENST00000635137 CABP1Q9NZU7 370 aa16.91■□□□□ 0.3
PATJ-215ENST00000635137 NCKAP5LQ9HCH0 1330 aa16.91■□□□□ 0.3
PATJ-215ENST00000635137 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.91■□□□□ 0.3
PATJ-215ENST00000635137 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
PATJ-215ENST00000635137 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
PATJ-215ENST00000635137 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
PATJ-215ENST00000635137 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
PATJ-215ENST00000635137 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
PATJ-215ENST00000635137 PPP2R1AP30153 589 aa16.87■□□□□ 0.29
PATJ-215ENST00000635137 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
PATJ-215ENST00000635137 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
PATJ-215ENST00000635137 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
PATJ-215ENST00000635137 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
PATJ-215ENST00000635137 PLEKHG3A1L390 1219 aa16.84■□□□□ 0.29
PATJ-215ENST00000635137 HSPA2P54652 639 aa16.84■□□□□ 0.29
PATJ-215ENST00000635137 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.29
PATJ-215ENST00000635137 ITSN1Q15811 1721 aa16.83■□□□□ 0.28
PATJ-215ENST00000635137 HNRNPUQ00839 825 aaKnown RBP eCLIP16.82■□□□□ 0.28
PATJ-215ENST00000635137 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
PATJ-215ENST00000635137 NWD1Q149M9 1564 aa16.82■□□□□ 0.28
PATJ-215ENST00000635137 CDC42BPGQ6DT37 1551 aa16.82■□□□□ 0.28
PATJ-215ENST00000635137 EDC4Q6P2E9 1401 aaKnown RBP16.82■□□□□ 0.28
PATJ-215ENST00000635137 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
PATJ-215ENST00000635137 INSRP06213 1382 aa16.8■□□□□ 0.28
PATJ-215ENST00000635137 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
PATJ-215ENST00000635137 FYB1O15117 783 aa16.8■□□□□ 0.28
PATJ-215ENST00000635137 TOPAZ1Q8N9V7 1692 aa16.8■□□□□ 0.28
PATJ-215ENST00000635137 AKAP12Q02952 1782 aa16.8■□□□□ 0.28
PATJ-215ENST00000635137 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
PATJ-215ENST00000635137 KIF20BQ96Q89 1820 aa16.79■□□□□ 0.28
PATJ-215ENST00000635137 C14orf37Q86TY3 774 aa16.79■□□□□ 0.28
PATJ-215ENST00000635137 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
PATJ-215ENST00000635137 ADGRL3Q9HAR2 1447 aa16.78■□□□□ 0.28
PATJ-215ENST00000635137 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
PATJ-215ENST00000635137 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.28
PATJ-215ENST00000635137 FMN2Q9NZ56 1722 aa16.77■□□□□ 0.28
PATJ-215ENST00000635137 CFAP53Q96M91 514 aa16.77■□□□□ 0.27
PATJ-215ENST00000635137 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.27
PATJ-215ENST00000635137 NCOA3Q9Y6Q9 1424 aa16.77■□□□□ 0.27
PATJ-215ENST00000635137 ACEP12821 1306 aa16.77■□□□□ 0.27
PATJ-215ENST00000635137 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
PATJ-215ENST00000635137 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
PATJ-215ENST00000635137 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
PATJ-215ENST00000635137 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
PATJ-215ENST00000635137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
PATJ-215ENST00000635137 NGDNQ8NEJ9 315 aaKnown RBP16.75■□□□□ 0.27
PATJ-215ENST00000635137 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
PATJ-215ENST00000635137 ZBED9Q6R2W3 1325 aa16.74■□□□□ 0.27
PATJ-215ENST00000635137 RGPD8O14715 1765 aaPredicted RBP16.73■□□□□ 0.27
PATJ-215ENST00000635137 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
PATJ-215ENST00000635137 C19orf44Q9H6X5 657 aa16.73■□□□□ 0.27
PATJ-215ENST00000635137 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms