RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 ARHGAP23Q9P227 1491 aa13.98□□□□□ -0.17
CHD2-207ENST00000626782 SLIT1O75093 1534 aa13.98□□□□□ -0.17
CHD2-207ENST00000626782 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
CHD2-207ENST00000626782 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
CHD2-207ENST00000626782 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
CHD2-207ENST00000626782 USP32Q8NFA0 1604 aa13.97□□□□□ -0.17
CHD2-207ENST00000626782 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
CHD2-207ENST00000626782 MINK1Q8N4C8 1332 aaPredicted RBP13.97□□□□□ -0.17
CHD2-207ENST00000626782 ABCC11Q96J66 1382 aa13.96□□□□□ -0.17
CHD2-207ENST00000626782 BCANQ96GW7 911 aa13.96□□□□□ -0.17
CHD2-207ENST00000626782 PUS7Q96PZ0 661 aaKnown RBP13.96□□□□□ -0.17
CHD2-207ENST00000626782 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.18
CHD2-207ENST00000626782 WAPLQ7Z5K2 1190 aa13.96□□□□□ -0.18
CHD2-207ENST00000626782 MED14O60244 1454 aa13.95□□□□□ -0.18
CHD2-207ENST00000626782 CPS1P31327 1500 aa13.95□□□□□ -0.18
CHD2-207ENST00000626782 PPP2R1AP30153 589 aa13.95□□□□□ -0.18
CHD2-207ENST00000626782 TECPR2O15040 1411 aa13.95□□□□□ -0.18
CHD2-207ENST00000626782 THEMISQ8N1K5 641 aaPredicted RBP13.94□□□□□ -0.18
CHD2-207ENST00000626782 SLC26A8Q96RN1 970 aa13.94□□□□□ -0.18
CHD2-207ENST00000626782 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
CHD2-207ENST00000626782 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
CHD2-207ENST00000626782 SENP3-EIF4A1A0A087X0R7 540 aa13.94□□□□□ -0.18
CHD2-207ENST00000626782 POGKQ9P215 609 aa13.94□□□□□ -0.18
CHD2-207ENST00000626782 ANKRD36BQ8N2N9 1353 aa13.93□□□□□ -0.18
CHD2-207ENST00000626782 A0A1W2PP64 1363 aa13.91□□□□□ -0.18
CHD2-207ENST00000626782 HDGFP51858 240 aaKnown RBP13.91□□□□□ -0.18
CHD2-207ENST00000626782 SRPK2P78362 688 aaKnown RBP13.91□□□□□ -0.18
CHD2-207ENST00000626782 EID1Q9Y6B2 187 aa13.91□□□□□ -0.18
CHD2-207ENST00000626782 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
CHD2-207ENST00000626782 PTPRUQ92729 1446 aa13.9□□□□□ -0.18
CHD2-207ENST00000626782 SETD1BQ9UPS6 1966 aaKnown RBP13.9□□□□□ -0.18
CHD2-207ENST00000626782 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.18
CHD2-207ENST00000626782 ROBO2Q9HCK4 1378 aa13.9□□□□□ -0.18
CHD2-207ENST00000626782 CDK19Q9BWU1 502 aa13.9□□□□□ -0.18
CHD2-207ENST00000626782 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
CHD2-207ENST00000626782 ATAD2Q6PL18 1390 aa13.89□□□□□ -0.19
CHD2-207ENST00000626782 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.89□□□□□ -0.19
CHD2-207ENST00000626782 HSPA2P54652 639 aa13.88□□□□□ -0.19
CHD2-207ENST00000626782 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
CHD2-207ENST00000626782 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
CHD2-207ENST00000626782 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
CHD2-207ENST00000626782 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
CHD2-207ENST00000626782 INSRP06213 1382 aa13.86□□□□□ -0.19
CHD2-207ENST00000626782 SHPRHQ149N8 1683 aa13.86□□□□□ -0.19
CHD2-207ENST00000626782 ANKRD26Q9UPS8 1709 aa13.85□□□□□ -0.19
CHD2-207ENST00000626782 ANKLE2Q86XL3 938 aa13.85□□□□□ -0.19
CHD2-207ENST00000626782 ADGRB2O60241 1585 aa13.85□□□□□ -0.19
CHD2-207ENST00000626782 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
CHD2-207ENST00000626782 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
CHD2-207ENST00000626782 XRN1Q8IZH2 1706 aaKnown RBP13.85□□□□□ -0.19
CHD2-207ENST00000626782 CGNL1Q0VF96 1302 aa13.85□□□□□ -0.19
CHD2-207ENST00000626782 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
CHD2-207ENST00000626782 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
CHD2-207ENST00000626782 ATP7BP35670 1465 aa13.83□□□□□ -0.2
CHD2-207ENST00000626782 NSD2O96028 1365 aa13.83□□□□□ -0.2
CHD2-207ENST00000626782 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
CHD2-207ENST00000626782 SMG6Q86US8 1419 aaKnown RBP13.82□□□□□ -0.2
CHD2-207ENST00000626782 TNNT2P45379 298 aaPredicted RBP13.82□□□□□ -0.2
CHD2-207ENST00000626782 MORC1Q86VD1 984 aa13.82□□□□□ -0.2
CHD2-207ENST00000626782 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
CHD2-207ENST00000626782 TOPAZ1Q8N9V7 1692 aa13.81□□□□□ -0.2
CHD2-207ENST00000626782 PRR36Q9H6K5 1346 aa13.81□□□□□ -0.2
CHD2-207ENST00000626782 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
CHD2-207ENST00000626782 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
CHD2-207ENST00000626782 AMOTL2Q9Y2J4 779 aa13.81□□□□□ -0.2
CHD2-207ENST00000626782 PTCH1Q13635 1447 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 AKAP12Q02952 1782 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 FYB1O15117 783 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 FKBP8Q14318 412 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
CHD2-207ENST00000626782 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
CHD2-207ENST00000626782 SALL2Q9Y467 1007 aaPredicted RBP13.79□□□□□ -0.2
CHD2-207ENST00000626782 LMTK3Q96Q04 1460 aa13.79□□□□□ -0.2
CHD2-207ENST00000626782 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
CHD2-207ENST00000626782 NPHP4O75161 1426 aaPredicted RBP13.79□□□□□ -0.2
CHD2-207ENST00000626782 KCNA6P17658 529 aa13.78□□□□□ -0.2
CHD2-207ENST00000626782 NUDT16Q96DE0 195 aaKnown RBP13.78□□□□□ -0.2
CHD2-207ENST00000626782 NUDCQ9Y266 331 aa13.78□□□□□ -0.2
CHD2-207ENST00000626782 ITSN1Q15811 1721 aa13.77□□□□□ -0.2
CHD2-207ENST00000626782 NKTRP30414 1462 aaKnown RBP13.77□□□□□ -0.21
CHD2-207ENST00000626782 WDR43Q15061 677 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■□□□ 11.8
CHD2-207ENST00000626782 CHD2O14647 1828 aaKnown RBP13.77□□□□□ -0.21
CHD2-207ENST00000626782 MTHFSP49914 203 aa13.76□□□□□ -0.21
CHD2-207ENST00000626782 HDGFL2Q7Z4V5 671 aaPredicted RBP13.76□□□□□ -0.21
CHD2-207ENST00000626782 NRKQ7Z2Y5 1582 aa13.76□□□□□ -0.21
CHD2-207ENST00000626782 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
CHD2-207ENST00000626782 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
CHD2-207ENST00000626782 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
CHD2-207ENST00000626782 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
CHD2-207ENST00000626782 EDC4Q6P2E9 1401 aaKnown RBP13.74□□□□□ -0.21
CHD2-207ENST00000626782 NUTM2FA1L443 756 aa13.74□□□□□ -0.21
CHD2-207ENST00000626782 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
CHD2-207ENST00000626782 CCDC146Q8IYE0 955 aa13.74□□□□□ -0.21
CHD2-207ENST00000626782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■□□□ 13.2
CHD2-207ENST00000626782 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
CHD2-207ENST00000626782 ZNF521Q96K83 1311 aa13.73□□□□□ -0.21
CHD2-207ENST00000626782 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms