RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.31
SNX12-207ENST00000622277 SLC12A5Q9H2X9 1139 aa16.96■□□□□ 0.31
SNX12-207ENST00000622277 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.3
SNX12-207ENST00000622277 ANKRD36BQ8N2N9 1353 aa16.95■□□□□ 0.3
SNX12-207ENST00000622277 POLR3AO14802 1390 aaPredicted RBP16.94■□□□□ 0.3
SNX12-207ENST00000622277 NINLQ9Y2I6 1382 aa16.94■□□□□ 0.3
SNX12-207ENST00000622277 SETD1AO15047 1707 aaKnown RBP16.94■□□□□ 0.3
SNX12-207ENST00000622277 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
SNX12-207ENST00000622277 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
SNX12-207ENST00000622277 RIMS2Q9UQ26 1411 aa16.93■□□□□ 0.3
SNX12-207ENST00000622277 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
SNX12-207ENST00000622277 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
SNX12-207ENST00000622277 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
SNX12-207ENST00000622277 ZNF521Q96K83 1311 aa16.92■□□□□ 0.3
SNX12-207ENST00000622277 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
SNX12-207ENST00000622277 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
SNX12-207ENST00000622277 NSD2O96028 1365 aa16.91■□□□□ 0.3
SNX12-207ENST00000622277 SHPRHQ149N8 1683 aa16.91■□□□□ 0.3
SNX12-207ENST00000622277 MLECQ14165 292 aa16.9■□□□□ 0.3
SNX12-207ENST00000622277 STK26Q9P289 416 aa16.9■□□□□ 0.3
SNX12-207ENST00000622277 CGNL1Q0VF96 1302 aa16.9■□□□□ 0.3
SNX12-207ENST00000622277 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
SNX12-207ENST00000622277 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
SNX12-207ENST00000622277 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
SNX12-207ENST00000622277 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
SNX12-207ENST00000622277 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
SNX12-207ENST00000622277 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
SNX12-207ENST00000622277 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNX12-207ENST00000622277 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
SNX12-207ENST00000622277 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
SNX12-207ENST00000622277 A0A1W2PP64 1363 aa16.85■□□□□ 0.29
SNX12-207ENST00000622277 POGKQ9P215 609 aa16.85■□□□□ 0.29
SNX12-207ENST00000622277 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
SNX12-207ENST00000622277 MINK1Q8N4C8 1332 aaPredicted RBP16.84■□□□□ 0.29
SNX12-207ENST00000622277 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
SNX12-207ENST00000622277 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
SNX12-207ENST00000622277 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
SNX12-207ENST00000622277 DUSP27Q5VZP5 1158 aa16.84■□□□□ 0.29
SNX12-207ENST00000622277 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNX12-207ENST00000622277 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
SNX12-207ENST00000622277 TNRQ92752 1358 aa16.83■□□□□ 0.29
SNX12-207ENST00000622277 ANKRD26Q9UPS8 1709 aa16.83■□□□□ 0.28
SNX12-207ENST00000622277 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.28
SNX12-207ENST00000622277 MED14O60244 1454 aa16.82■□□□□ 0.28
SNX12-207ENST00000622277 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
SNX12-207ENST00000622277 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
SNX12-207ENST00000622277 TRMT2AQ8IZ69 625 aaKnown RBP16.81■□□□□ 0.28
SNX12-207ENST00000622277 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
SNX12-207ENST00000622277 UBR1Q8IWV7 1749 aa16.81■□□□□ 0.28
SNX12-207ENST00000622277 APAF1O14727 1248 aa16.81■□□□□ 0.28
SNX12-207ENST00000622277 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
SNX12-207ENST00000622277 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
SNX12-207ENST00000622277 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
SNX12-207ENST00000622277 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
SNX12-207ENST00000622277 MTHFSP49914 203 aa16.79■□□□□ 0.28
SNX12-207ENST00000622277 CDK19Q9BWU1 502 aa16.79■□□□□ 0.28
SNX12-207ENST00000622277 TNNT2P45379 298 aaPredicted RBP16.78■□□□□ 0.28
SNX12-207ENST00000622277 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
SNX12-207ENST00000622277 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
SNX12-207ENST00000622277 TECPR2O15040 1411 aa16.78■□□□□ 0.28
SNX12-207ENST00000622277 METP08581 1390 aa16.77■□□□□ 0.27
SNX12-207ENST00000622277 ATP7BP35670 1465 aa16.77■□□□□ 0.27
SNX12-207ENST00000622277 CPS1P31327 1500 aa16.77■□□□□ 0.27
SNX12-207ENST00000622277 HDGFP51858 240 aaKnown RBP16.76■□□□□ 0.27
SNX12-207ENST00000622277 TMEM2Q9UHN6 1383 aa16.76■□□□□ 0.27
SNX12-207ENST00000622277 KIF20BQ96Q89 1820 aa16.76■□□□□ 0.27
SNX12-207ENST00000622277 FAM135BQ49AJ0 1406 aa16.76■□□□□ 0.27
SNX12-207ENST00000622277 SIRT1Q96EB6 747 aa16.75■□□□□ 0.27
SNX12-207ENST00000622277 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
SNX12-207ENST00000622277 NKTRP30414 1462 aaKnown RBP16.75■□□□□ 0.27
SNX12-207ENST00000622277 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
SNX12-207ENST00000622277 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
SNX12-207ENST00000622277 E9PSI1 815 aa16.74■□□□□ 0.27
SNX12-207ENST00000622277 WAPLQ7Z5K2 1190 aa16.74■□□□□ 0.27
SNX12-207ENST00000622277 FYB1O15117 783 aa16.73■□□□□ 0.27
SNX12-207ENST00000622277 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
SNX12-207ENST00000622277 ADGRB2O60241 1585 aa16.73■□□□□ 0.27
SNX12-207ENST00000622277 PLIN1O60240 522 aa16.72■□□□□ 0.27
SNX12-207ENST00000622277 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
SNX12-207ENST00000622277 WWC1Q8IX03 1113 aa16.71■□□□□ 0.27
SNX12-207ENST00000622277 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.27
SNX12-207ENST00000622277 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
SNX12-207ENST00000622277 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
SNX12-207ENST00000622277 DMRT2Q9Y5R5 561 aa16.7■□□□□ 0.26
SNX12-207ENST00000622277 C3P01024 1663 aa16.7■□□□□ 0.26
SNX12-207ENST00000622277 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
SNX12-207ENST00000622277 NOP58Q9Y2X3 529 aaKnown RBP16.69■□□□□ 0.26
SNX12-207ENST00000622277 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
SNX12-207ENST00000622277 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
SNX12-207ENST00000622277 WASLO00401 505 aaPredicted RBP16.69■□□□□ 0.26
SNX12-207ENST00000622277 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
SNX12-207ENST00000622277 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
SNX12-207ENST00000622277 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
SNX12-207ENST00000622277 PNPLA6Q8IY17 1366 aa16.67■□□□□ 0.26
SNX12-207ENST00000622277 DEKP35659 375 aaKnown RBP16.67■□□□□ 0.26
SNX12-207ENST00000622277 PLPPR3Q6T4P5 718 aa16.67■□□□□ 0.26
SNX12-207ENST00000622277 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
SNX12-207ENST00000622277 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
SNX12-207ENST00000622277 SLIT1O75093 1534 aa16.66■□□□□ 0.26
SNX12-207ENST00000622277 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms