RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 NISCHQ9Y2I1 1504 aa27.85■■■□□ 2.05
SNX12-207ENST00000622277 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
SNX12-207ENST00000622277 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
SNX12-207ENST00000622277 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
SNX12-207ENST00000622277 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
SNX12-207ENST00000622277 DCAF8L2P0C7V8 631 aa22.77■■□□□ 1.24
SNX12-207ENST00000622277 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
SNX12-207ENST00000622277 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
SNX12-207ENST00000622277 ABCC9O60706 1549 aa22.32■■□□□ 1.16
SNX12-207ENST00000622277 NACADO15069 1562 aa22.29■■□□□ 1.16
SNX12-207ENST00000622277 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
SNX12-207ENST00000622277 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
SNX12-207ENST00000622277 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
SNX12-207ENST00000622277 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
SNX12-207ENST00000622277 CECR2Q9BXF3 1484 aa21.62■■□□□ 1.05
SNX12-207ENST00000622277 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
SNX12-207ENST00000622277 MROH2BQ7Z745 1585 aa21.55■■□□□ 1.04
SNX12-207ENST00000622277 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
SNX12-207ENST00000622277 WIZO95785 1651 aa21.4■■□□□ 1.02
SNX12-207ENST00000622277 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
SNX12-207ENST00000622277 SMARCA4P51532 1647 aa21.32■■□□□ 1
SNX12-207ENST00000622277 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
SNX12-207ENST00000622277 PABPN1Q86U42 306 aaKnown RBP eCLIP21.13■□□□□ 0.97
SNX12-207ENST00000622277 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.97
SNX12-207ENST00000622277 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
SNX12-207ENST00000622277 SMARCA2P51531 1590 aa21.01■□□□□ 0.95
SNX12-207ENST00000622277 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
SNX12-207ENST00000622277 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
SNX12-207ENST00000622277 LOC105371045A0A1W2PR82 267 aa20.89■□□□□ 0.93
SNX12-207ENST00000622277 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
SNX12-207ENST00000622277 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
SNX12-207ENST00000622277 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
SNX12-207ENST00000622277 FAM9AQ8IZU1 332 aaPredicted RBP20.64■□□□□ 0.89
SNX12-207ENST00000622277 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
SNX12-207ENST00000622277 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
SNX12-207ENST00000622277 HRCP23327 699 aa20.54■□□□□ 0.88
SNX12-207ENST00000622277 WRNQ14191 1432 aaPredicted RBP eCLIP20.48■□□□□ 0.87
SNX12-207ENST00000622277 EEA1Q15075 1411 aa20.44■□□□□ 0.86
SNX12-207ENST00000622277 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
SNX12-207ENST00000622277 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
SNX12-207ENST00000622277 SOGA1O94964 1423 aa20.4■□□□□ 0.86
SNX12-207ENST00000622277 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.84
SNX12-207ENST00000622277 RUSC2Q8N2Y8 1516 aa20.31■□□□□ 0.84
SNX12-207ENST00000622277 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
SNX12-207ENST00000622277 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
SNX12-207ENST00000622277 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
SNX12-207ENST00000622277 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
SNX12-207ENST00000622277 CFTRP13569 1480 aa20.25■□□□□ 0.83
SNX12-207ENST00000622277 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
SNX12-207ENST00000622277 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
SNX12-207ENST00000622277 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
SNX12-207ENST00000622277 GOLGA3Q08378 1498 aa20.18■□□□□ 0.82
SNX12-207ENST00000622277 KIF21BO75037 1637 aa20.18■□□□□ 0.82
SNX12-207ENST00000622277 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
SNX12-207ENST00000622277 CEP164Q9UPV0 1460 aa20.13■□□□□ 0.81
SNX12-207ENST00000622277 CUX1P39880 1505 aa20.13■□□□□ 0.81
SNX12-207ENST00000622277 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
SNX12-207ENST00000622277 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
SNX12-207ENST00000622277 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.79
SNX12-207ENST00000622277 PPARGC1BQ86YN6 1023 aaKnown RBP20.01■□□□□ 0.79
SNX12-207ENST00000622277 RAPGEF2Q9Y4G8 1499 aa19.96■□□□□ 0.79
SNX12-207ENST00000622277 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
SNX12-207ENST00000622277 PRXQ9BXM0 1461 aa19.93■□□□□ 0.78
SNX12-207ENST00000622277 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
SNX12-207ENST00000622277 CLIP1P30622 1438 aa19.87■□□□□ 0.77
SNX12-207ENST00000622277 FANCD2Q9BXW9 1451 aa19.86■□□□□ 0.77
SNX12-207ENST00000622277 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
SNX12-207ENST00000622277 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
SNX12-207ENST00000622277 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
SNX12-207ENST00000622277 VPS8Q8N3P4 1428 aa19.78■□□□□ 0.76
SNX12-207ENST00000622277 NESP48681 1621 aa19.77■□□□□ 0.76
SNX12-207ENST00000622277 CUX2O14529 1486 aa19.77■□□□□ 0.75
SNX12-207ENST00000622277 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
SNX12-207ENST00000622277 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
SNX12-207ENST00000622277 IGF1RP08069 1367 aa19.7■□□□□ 0.74
SNX12-207ENST00000622277 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
SNX12-207ENST00000622277 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
SNX12-207ENST00000622277 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
SNX12-207ENST00000622277 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
SNX12-207ENST00000622277 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
SNX12-207ENST00000622277 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
SNX12-207ENST00000622277 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
SNX12-207ENST00000622277 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
SNX12-207ENST00000622277 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
SNX12-207ENST00000622277 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
SNX12-207ENST00000622277 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
SNX12-207ENST00000622277 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
SNX12-207ENST00000622277 CUL7Q14999 1698 aa19.51■□□□□ 0.71
SNX12-207ENST00000622277 APLP2Q06481 763 aa19.51■□□□□ 0.71
SNX12-207ENST00000622277 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
SNX12-207ENST00000622277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.43■□□□□ 0.7
SNX12-207ENST00000622277 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
SNX12-207ENST00000622277 TARBP1Q13395 1621 aaKnown RBP19.39■□□□□ 0.69
SNX12-207ENST00000622277 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
SNX12-207ENST00000622277 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
SNX12-207ENST00000622277 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
SNX12-207ENST00000622277 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
SNX12-207ENST00000622277 EFCAB5A4FU69 1503 aa19.34■□□□□ 0.69
SNX12-207ENST00000622277 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
SNX12-207ENST00000622277 KANK4Q5T7N3 995 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms