RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 OFD1O75665 1012 aa15.84■□□□□ 0.13
COL1A2-213ENST00000620463 NBPF1Q3BBV0 1214 aa15.84■□□□□ 0.13
COL1A2-213ENST00000620463 CWC22Q9HCG8 908 aaKnown RBP15.84■□□□□ 0.13
COL1A2-213ENST00000620463 CCDC27Q2M243 656 aa15.83■□□□□ 0.12
COL1A2-213ENST00000620463 CCDC94Q9BW85 323 aaPredicted RBP15.83■□□□□ 0.12
COL1A2-213ENST00000620463 GPATCH11Q8N954 259 aa15.82■□□□□ 0.12
COL1A2-213ENST00000620463 DNAJC2Q99543 621 aaKnown RBP15.82■□□□□ 0.12
COL1A2-213ENST00000620463 IGF1RP08069 1367 aa15.82■□□□□ 0.12
COL1A2-213ENST00000620463 PRIMPOLQ96LW4 560 aa15.81■□□□□ 0.12
COL1A2-213ENST00000620463 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
COL1A2-213ENST00000620463 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
COL1A2-213ENST00000620463 STK31Q9BXU1 1019 aa15.81■□□□□ 0.12
COL1A2-213ENST00000620463 TPM1P09493 284 aa15.8■□□□□ 0.12
COL1A2-213ENST00000620463 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
COL1A2-213ENST00000620463 CYB5RLQ6IPT4 315 aa15.8■□□□□ 0.12
COL1A2-213ENST00000620463 CCDC192P0DO97 292 aa15.8■□□□□ 0.12
COL1A2-213ENST00000620463 VGLL3A8MV65 326 aa15.8■□□□□ 0.12
COL1A2-213ENST00000620463 GPATCH3Q96I76 525 aa15.8■□□□□ 0.12
COL1A2-213ENST00000620463 RUFY1Q96T51 708 aa15.8■□□□□ 0.12
COL1A2-213ENST00000620463 SSFA2P28290 1259 aa15.79■□□□□ 0.12
COL1A2-213ENST00000620463 USP8P40818 1118 aa15.79■□□□□ 0.12
COL1A2-213ENST00000620463 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
COL1A2-213ENST00000620463 PES1O00541 588 aaKnown RBP15.79■□□□□ 0.12
COL1A2-213ENST00000620463 CCDC73Q6ZRK6 1079 aa15.79■□□□□ 0.12
COL1A2-213ENST00000620463 TSR1Q2NL82 804 aaKnown RBP15.78■□□□□ 0.12
COL1A2-213ENST00000620463 HNRNPMP52272 730 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL1A2-213ENST00000620463 USP25Q9UHP3 1055 aa15.77■□□□□ 0.12
COL1A2-213ENST00000620463 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
COL1A2-213ENST00000620463 KIF20AO95235 890 aa15.77■□□□□ 0.11
COL1A2-213ENST00000620463 ZKSCAN1P17029 563 aaPredicted RBP15.77■□□□□ 0.11
COL1A2-213ENST00000620463 OSCARQ8IYS5 282 aa15.77■□□□□ 0.11
COL1A2-213ENST00000620463 ERCC4Q92889 916 aaPredicted RBP15.77■□□□□ 0.11
COL1A2-213ENST00000620463 SOX12O15370 315 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 MCM2P49736 904 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 TAF7LQ5H9L4 462 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 A0A0G2JS52 829 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 ZKSCAN5Q9Y2L8 839 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 POLR3GO15318 223 aaPredicted RBP15.76■□□□□ 0.11
COL1A2-213ENST00000620463 AXDND1Q5T1B0 1012 aaPredicted RBP15.76■□□□□ 0.11
COL1A2-213ENST00000620463 TMCO3Q6UWJ1 677 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 HDGFL2Q7Z4V5 671 aaPredicted RBP15.76■□□□□ 0.11
COL1A2-213ENST00000620463 UBXN4Q92575 508 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 RUNDC1Q96C34 613 aa15.76■□□□□ 0.11
COL1A2-213ENST00000620463 IPO4Q8TEX9 1081 aaKnown RBP15.75■□□□□ 0.11
COL1A2-213ENST00000620463 KIF21BO75037 1637 aa15.75■□□□□ 0.11
COL1A2-213ENST00000620463 KLHL40Q2TBA0 621 aa15.74■□□□□ 0.11
COL1A2-213ENST00000620463 C16orf45Q96MC5 204 aaPredicted RBP15.74■□□□□ 0.11
COL1A2-213ENST00000620463 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.74■□□□□ 0.11
COL1A2-213ENST00000620463 SDF4Q9BRK5 362 aa15.74■□□□□ 0.11
COL1A2-213ENST00000620463 NAT10Q9H0A0 1025 aaKnown RBP15.74■□□□□ 0.11
COL1A2-213ENST00000620463 SMC2O95347 1197 aa15.74■□□□□ 0.11
COL1A2-213ENST00000620463 NBPF8Q3BBV2 869 aa15.74■□□□□ 0.11
COL1A2-213ENST00000620463 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
COL1A2-213ENST00000620463 IPO7O95373 1038 aaKnown RBP15.73■□□□□ 0.11
COL1A2-213ENST00000620463 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
COL1A2-213ENST00000620463 GTF2A1P52655 376 aaPredicted RBP15.73■□□□□ 0.11
COL1A2-213ENST00000620463 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
COL1A2-213ENST00000620463 TBC1D32Q96NH3 1257 aa15.73■□□□□ 0.11
COL1A2-213ENST00000620463 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
COL1A2-213ENST00000620463 API5Q9BZZ5 524 aaKnown RBP15.73■□□□□ 0.11
COL1A2-213ENST00000620463 TNNT1P13805 278 aa15.72■□□□□ 0.11
COL1A2-213ENST00000620463 KRT222Q8N1A0 295 aa15.72■□□□□ 0.11
COL1A2-213ENST00000620463 PDILTQ8N807 584 aa15.72■□□□□ 0.11
COL1A2-213ENST00000620463 KIF3BO15066 747 aa15.72■□□□□ 0.11
COL1A2-213ENST00000620463 RBM25P49756 843 aaKnown RBP15.72■□□□□ 0.11
COL1A2-213ENST00000620463 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
COL1A2-213ENST00000620463 NOL10Q9BSC4 688 aaKnown RBP15.72■□□□□ 0.11
COL1A2-213ENST00000620463 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
COL1A2-213ENST00000620463 EIF3JO75822 258 aaKnown RBP15.72■□□□□ 0.11
COL1A2-213ENST00000620463 PTPN14Q15678 1187 aa15.72■□□□□ 0.11
COL1A2-213ENST00000620463 RNF20Q5VTR2 975 aa15.72■□□□□ 0.11
COL1A2-213ENST00000620463 CCP110O43303 1012 aa15.71■□□□□ 0.11
COL1A2-213ENST00000620463 KIAA0754O94854 1291 aa15.71■□□□□ 0.11
COL1A2-213ENST00000620463 LMOD3Q0VAK6 560 aa15.71■□□□□ 0.11
COL1A2-213ENST00000620463 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
COL1A2-213ENST00000620463 GIMAP7Q8NHV1 300 aa15.71■□□□□ 0.11
COL1A2-213ENST00000620463 RUFY2Q8WXA3 655 aa15.71■□□□□ 0.11
COL1A2-213ENST00000620463 FAM177A1Q8N128 213 aaPredicted RBP15.71■□□□□ 0.11
COL1A2-213ENST00000620463 C8orf34Q49A92 452 aa15.71■□□□□ 0.1
COL1A2-213ENST00000620463 LMOD2Q6P5Q4 547 aa15.71■□□□□ 0.1
COL1A2-213ENST00000620463 CCDC144AA2RUR9 1427 aa15.7■□□□□ 0.1
COL1A2-213ENST00000620463 BAG4O95429 457 aaKnown RBP15.7■□□□□ 0.1
COL1A2-213ENST00000620463 CDR1P51861 262 aa15.7■□□□□ 0.1
COL1A2-213ENST00000620463 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
COL1A2-213ENST00000620463 NOLC1Q14978 699 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL1A2-213ENST00000620463 TNMDQ9H2S6 317 aa15.7■□□□□ 0.1
COL1A2-213ENST00000620463 TRIM34Q9BYJ4 488 aa15.69■□□□□ 0.1
COL1A2-213ENST00000620463 TTLL5Q6EMB2 1281 aa15.69■□□□□ 0.1
COL1A2-213ENST00000620463 PPP2R1AP30153 589 aa15.69■□□□□ 0.1
COL1A2-213ENST00000620463 TCP11L2Q8N4U5 519 aa15.69■□□□□ 0.1
COL1A2-213ENST00000620463 ZNF830Q96NB3 372 aaPredicted RBP15.69■□□□□ 0.1
COL1A2-213ENST00000620463 NINLQ9Y2I6 1382 aa15.69■□□□□ 0.1
COL1A2-213ENST00000620463 KIF18AQ8NI77 898 aa15.69■□□□□ 0.1
COL1A2-213ENST00000620463 STK26Q9P289 416 aa15.69■□□□□ 0.1
COL1A2-213ENST00000620463 RBM27Q9P2N5 1060 aaKnown RBP15.69■□□□□ 0.1
COL1A2-213ENST00000620463 CT47B1P0C2W7 299 aaPredicted RBP15.68■□□□□ 0.1
COL1A2-213ENST00000620463 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
COL1A2-213ENST00000620463 KINO60870 393 aaKnown RBP15.68■□□□□ 0.1
COL1A2-213ENST00000620463 ERLIN1O75477 346 aa15.68■□□□□ 0.1
COL1A2-213ENST00000620463 FOSBP53539 338 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms