RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 RIMS1Q86UR5 1692 aaKnown RBP34.11■■■■□ 3.05
VEGFC-202ENST00000618562 METP08581 1390 aa34.1■■■■□ 3.05
VEGFC-202ENST00000618562 POGKQ9P215 609 aa34.1■■■■□ 3.05
VEGFC-202ENST00000618562 SLC12A5Q9H2X9 1139 aa34.08■■■■□ 3.05
VEGFC-202ENST00000618562 ABCC11Q96J66 1382 aa34.08■■■■□ 3.05
VEGFC-202ENST00000618562 MINK1Q8N4C8 1332 aaPredicted RBP34.06■■■■□ 3.04
VEGFC-202ENST00000618562 LTKP29376 864 aa34.06■■■■□ 3.04
VEGFC-202ENST00000618562 SLIT1O75093 1534 aa34.06■■■■□ 3.04
VEGFC-202ENST00000618562 CABP2Q9NPB3 220 aa34.05■■■■□ 3.04
VEGFC-202ENST00000618562 SMG6Q86US8 1419 aaKnown RBP34.05■■■■□ 3.04
VEGFC-202ENST00000618562 ARHGAP23Q9P227 1491 aa34.05■■■■□ 3.04
VEGFC-202ENST00000618562 ADAMTSL3P82987 1691 aa34.05■■■■□ 3.04
VEGFC-202ENST00000618562 PLEKHG1Q9ULL1 1385 aa34.03■■■■□ 3.04
VEGFC-202ENST00000618562 ADAMTS13Q76LX8 1427 aa34.03■■■■□ 3.04
VEGFC-202ENST00000618562 KNDC1Q76NI1 1749 aa34.03■■■■□ 3.04
VEGFC-202ENST00000618562 PLEKHH1Q9ULM0 1364 aa34■■■■□ 3.03
VEGFC-202ENST00000618562 NSD3Q9BZ95 1437 aa33.99■■■■□ 3.03
VEGFC-202ENST00000618562 WAPLQ7Z5K2 1190 aa33.99■■■■□ 3.03
VEGFC-202ENST00000618562 TXNDC2Q86VQ3 553 aa33.99■■■■□ 3.03
VEGFC-202ENST00000618562 IRX6P78412 446 aaPredicted RBP33.99■■■■□ 3.03
VEGFC-202ENST00000618562 PPP2R1AP30153 589 aa33.98■■■■□ 3.03
VEGFC-202ENST00000618562 SRPK2P78362 688 aaKnown RBP33.98■■■■□ 3.03
VEGFC-202ENST00000618562 TECPR2O15040 1411 aa33.98■■■■□ 3.03
VEGFC-202ENST00000618562 USP32Q8NFA0 1604 aa33.96■■■■□ 3.03
VEGFC-202ENST00000618562 PPP4R2Q9NY27 417 aa33.95■■■■□ 3.03
VEGFC-202ENST00000618562 ANKRD36BQ8N2N9 1353 aa33.95■■■■□ 3.03
VEGFC-202ENST00000618562 CPS1P31327 1500 aa33.95■■■■□ 3.03
VEGFC-202ENST00000618562 EID1Q9Y6B2 187 aa33.95■■■■□ 3.03
VEGFC-202ENST00000618562 CEP170BQ9Y4F5 1589 aaPredicted RBP33.94■■■■□ 3.02
VEGFC-202ENST00000618562 MYT1Q01538 1121 aa33.94■■■■□ 3.02
VEGFC-202ENST00000618562 THEMISQ8N1K5 641 aaPredicted RBP33.94■■■■□ 3.02
VEGFC-202ENST00000618562 ATAD2Q6PL18 1390 aa33.94■■■■□ 3.02
VEGFC-202ENST00000618562 NINLQ9Y2I6 1382 aa33.94■■■■□ 3.02
VEGFC-202ENST00000618562 MED14O60244 1454 aa33.94■■■■□ 3.02
VEGFC-202ENST00000618562 FAM135BQ49AJ0 1406 aa33.92■■■■□ 3.02
VEGFC-202ENST00000618562 CDK19Q9BWU1 502 aa33.91■■■■□ 3.02
VEGFC-202ENST00000618562 NUDCQ9Y266 331 aa33.91■■■■□ 3.02
VEGFC-202ENST00000618562 SIRT1Q96EB6 747 aa33.9■■■■□ 3.02
VEGFC-202ENST00000618562 A0A1W2PP64 1363 aa33.86■■■■□ 3.01
VEGFC-202ENST00000618562 ZNF142P52746 1687 aaPredicted RBP33.84■■■■□ 3.01
VEGFC-202ENST00000618562 CD163L1Q9NR16 1453 aa33.84■■■■□ 3.01
VEGFC-202ENST00000618562 SLC26A8Q96RN1 970 aa33.84■■■■□ 3.01
VEGFC-202ENST00000618562 ROBO2Q9HCK4 1378 aa33.83■■■■□ 3.01
VEGFC-202ENST00000618562 CGNL1Q0VF96 1302 aa33.82■■■■□ 3
VEGFC-202ENST00000618562 PTPRUQ92729 1446 aa33.81■■■■□ 3
VEGFC-202ENST00000618562 RNF123Q5XPI4 1314 aa33.81■■■■□ 3
VEGFC-202ENST00000618562 RBM19Q9Y4C8 960 aaKnown RBP33.8■■■■□ 3
VEGFC-202ENST00000618562 INSRP06213 1382 aa33.8■■■■□ 3
VEGFC-202ENST00000618562 DIP2AQ14689 1571 aa33.79■■■■□ 3
VEGFC-202ENST00000618562 SETD1BQ9UPS6 1966 aaKnown RBP33.78■■■■□ 3
VEGFC-202ENST00000618562 WASLO00401 505 aaPredicted RBP33.78■■■■□ 3
VEGFC-202ENST00000618562 TBX22Q9Y458 520 aa33.78■■■■□ 3
VEGFC-202ENST00000618562 BLMP54132 1417 aaPredicted RBP33.77■■■■□ 3
VEGFC-202ENST00000618562 TERF2IPQ9NYB0 399 aa33.76■■■■□ 3
VEGFC-202ENST00000618562 SENP3-EIF4A1A0A087X0R7 540 aa33.76■■■□□ 2.99
VEGFC-202ENST00000618562 NSD2O96028 1365 aa33.75■■■□□ 2.99
VEGFC-202ENST00000618562 MORC1Q86VD1 984 aa33.75■■■□□ 2.99
VEGFC-202ENST00000618562 CABP1Q9NZU7 370 aa33.75■■■□□ 2.99
VEGFC-202ENST00000618562 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.74■■■□□ 2.99
VEGFC-202ENST00000618562 ADGRB2O60241 1585 aa33.72■■■□□ 2.99
VEGFC-202ENST00000618562 ATP7BP35670 1465 aa33.71■■■□□ 2.99
VEGFC-202ENST00000618562 ADAMTS8Q9UP79 889 aa33.7■■■□□ 2.99
VEGFC-202ENST00000618562 HDGFL2Q7Z4V5 671 aaPredicted RBP33.68■■■□□ 2.98
VEGFC-202ENST00000618562 AMOTL2Q9Y2J4 779 aa33.68■■■□□ 2.98
VEGFC-202ENST00000618562 ANKRD26Q9UPS8 1709 aa33.67■■■□□ 2.98
VEGFC-202ENST00000618562 WDR43Q15061 677 aaKnown RBP eCLIP33.67■■■□□ 2.98
VEGFC-202ENST00000618562 TNNT2P45379 298 aaPredicted RBP33.66■■■□□ 2.98
VEGFC-202ENST00000618562 XRN1Q8IZH2 1706 aaKnown RBP33.66■■■□□ 2.98
VEGFC-202ENST00000618562 PTCH1Q13635 1447 aa33.66■■■□□ 2.98
VEGFC-202ENST00000618562 PPIP5K1Q6PFW1 1433 aa33.65■■■□□ 2.98
VEGFC-202ENST00000618562 POLR3AO14802 1390 aaPredicted RBP33.65■■■□□ 2.98
VEGFC-202ENST00000618562 NUDT16Q96DE0 195 aaKnown RBP33.63■■■□□ 2.97
VEGFC-202ENST00000618562 KIF20BQ96Q89 1820 aa33.63■■■□□ 2.97
VEGFC-202ENST00000618562 ANKLE2Q86XL3 938 aa33.62■■■□□ 2.97
VEGFC-202ENST00000618562 FYB1O15117 783 aa33.61■■■□□ 2.97
VEGFC-202ENST00000618562 CPSF1Q10570 1443 aaKnown RBP33.61■■■□□ 2.97
VEGFC-202ENST00000618562 PDE3BQ13370 1112 aa33.6■■■□□ 2.97
VEGFC-202ENST00000618562 B4GALNT3Q6L9W6 998 aa33.6■■■□□ 2.97
VEGFC-202ENST00000618562 GGNBP2Q9H3C7 697 aa33.6■■■□□ 2.97
VEGFC-202ENST00000618562 PRR36Q9H6K5 1346 aa33.6■■■□□ 2.97
VEGFC-202ENST00000618562 CDC42BPGQ6DT37 1551 aa33.59■■■□□ 2.97
VEGFC-202ENST00000618562 CCDC61Q9Y6R9 512 aa33.59■■■□□ 2.97
VEGFC-202ENST00000618562 NCKAP5LQ9HCH0 1330 aa33.58■■■□□ 2.97
VEGFC-202ENST00000618562 PIK3R4Q99570 1358 aa33.58■■■□□ 2.97
VEGFC-202ENST00000618562 SHPRHQ149N8 1683 aa33.58■■■□□ 2.97
VEGFC-202ENST00000618562 SALL2Q9Y467 1007 aaPredicted RBP33.56■■■□□ 2.96
VEGFC-202ENST00000618562 TOPAZ1Q8N9V7 1692 aa33.55■■■□□ 2.96
VEGFC-202ENST00000618562 MON2Q7Z3U7 1717 aa33.54■■■□□ 2.96
VEGFC-202ENST00000618562 AKAP12Q02952 1782 aa33.54■■■□□ 2.96
VEGFC-202ENST00000618562 MTHFSP49914 203 aa33.54■■■□□ 2.96
VEGFC-202ENST00000618562 ITSN1Q15811 1721 aa33.53■■■□□ 2.96
VEGFC-202ENST00000618562 EDC4Q6P2E9 1401 aaKnown RBP33.51■■■□□ 2.96
VEGFC-202ENST00000618562 CHD2O14647 1828 aaKnown RBP33.51■■■□□ 2.95
VEGFC-202ENST00000618562 KCNA6P17658 529 aa33.51■■■□□ 2.95
VEGFC-202ENST00000618562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.49■■■□□ 2.95
VEGFC-202ENST00000618562 FANCIQ9NVI1 1328 aa33.45■■■□□ 2.95
VEGFC-202ENST00000618562 CFAP53Q96M91 514 aa33.44■■■□□ 2.94
VEGFC-202ENST00000618562 CCDC146Q8IYE0 955 aa33.44■■■□□ 2.94
VEGFC-202ENST00000618562 NUTM2FA1L443 756 aa33.43■■■□□ 2.94
VEGFC-202ENST00000618562 NPHP4O75161 1426 aaPredicted RBP33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms