RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 RRP9O43818 475 aaKnown RBP11.94□□□□□ -0.5
MCM3-207ENST00000616552 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
MCM3-207ENST00000616552 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
MCM3-207ENST00000616552 NUTM2DQ5VT03 806 aaPredicted RBP11.94□□□□□ -0.5
MCM3-207ENST00000616552 RWDD1Q9H446 243 aaPredicted RBP11.94□□□□□ -0.5
MCM3-207ENST00000616552 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
MCM3-207ENST00000616552 ABCC2Q92887 1545 aa11.93□□□□□ -0.5
MCM3-207ENST00000616552 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
MCM3-207ENST00000616552 RTEL1-TNFRSF6BF6WH68 1400 aa11.93□□□□□ -0.5
MCM3-207ENST00000616552 SSFA2P28290 1259 aa11.93□□□□□ -0.5
MCM3-207ENST00000616552 MPNDQ8N594 471 aa11.93□□□□□ -0.5
MCM3-207ENST00000616552 ATP10AO60312 1499 aa11.92□□□□□ -0.5
MCM3-207ENST00000616552 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
MCM3-207ENST00000616552 JARID2Q92833 1246 aaPredicted RBP11.92□□□□□ -0.5
MCM3-207ENST00000616552 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
MCM3-207ENST00000616552 FAM13BQ9NYF5 915 aa11.92□□□□□ -0.5
MCM3-207ENST00000616552 MTHFSP49914 203 aa11.91□□□□□ -0.5
MCM3-207ENST00000616552 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
MCM3-207ENST00000616552 MORC1Q86VD1 984 aa11.91□□□□□ -0.5
MCM3-207ENST00000616552 ATP10BO94823 1461 aa11.91□□□□□ -0.5
MCM3-207ENST00000616552 TRIM27P14373 513 aa11.91□□□□□ -0.5
MCM3-207ENST00000616552 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
MCM3-207ENST00000616552 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
MCM3-207ENST00000616552 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
MCM3-207ENST00000616552 ASXL1Q8IXJ9 1541 aa11.9□□□□□ -0.5
MCM3-207ENST00000616552 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
MCM3-207ENST00000616552 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.51
MCM3-207ENST00000616552 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.51
MCM3-207ENST00000616552 PKP1Q13835 747 aa11.9□□□□□ -0.51
MCM3-207ENST00000616552 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.51
MCM3-207ENST00000616552 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.51
MCM3-207ENST00000616552 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.51
MCM3-207ENST00000616552 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
MCM3-207ENST00000616552 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
MCM3-207ENST00000616552 TRAK1Q9UPV9 953 aa11.89□□□□□ -0.51
MCM3-207ENST00000616552 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
MCM3-207ENST00000616552 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
MCM3-207ENST00000616552 XPCQ01831 940 aaPredicted RBP11.88□□□□□ -0.51
MCM3-207ENST00000616552 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 PRDM10Q9NQV6 1147 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 NOB1Q9ULX3 412 aaKnown RBP11.88□□□□□ -0.51
MCM3-207ENST00000616552 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 PIK3C2GO75747 1445 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 ADGRF5Q8IZF2 1346 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 RIPK4P57078 832 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
MCM3-207ENST00000616552 IQGAP3Q86VI3 1631 aa11.87□□□□□ -0.51
MCM3-207ENST00000616552 NINLQ9Y2I6 1382 aa11.87□□□□□ -0.51
MCM3-207ENST00000616552 SYNMO15061 1565 aa11.87□□□□□ -0.51
MCM3-207ENST00000616552 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
MCM3-207ENST00000616552 RUNDC1Q96C34 613 aa11.87□□□□□ -0.51
MCM3-207ENST00000616552 IQGAP1P46940 1657 aa11.87□□□□□ -0.51
MCM3-207ENST00000616552 ZKSCAN2Q63HK3 967 aa11.87□□□□□ -0.51
MCM3-207ENST00000616552 KIF2CQ99661 725 aa11.87□□□□□ -0.51
MCM3-207ENST00000616552 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
MCM3-207ENST00000616552 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
MCM3-207ENST00000616552 FBLN1P23142 703 aa11.86□□□□□ -0.51
MCM3-207ENST00000616552 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
MCM3-207ENST00000616552 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
MCM3-207ENST00000616552 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
MCM3-207ENST00000616552 DDIT3P35638 169 aa11.86□□□□□ -0.51
MCM3-207ENST00000616552 DDX49Q9Y6V7 483 aaKnown RBP11.86□□□□□ -0.51
MCM3-207ENST00000616552 SYCP2Q9BX26 1530 aa11.85□□□□□ -0.51
MCM3-207ENST00000616552 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
MCM3-207ENST00000616552 TSC1Q92574 1164 aa11.85□□□□□ -0.51
MCM3-207ENST00000616552 ABCA8O94911 1581 aa11.85□□□□□ -0.51
MCM3-207ENST00000616552 CAVIN1Q6NZI2 390 aaKnown RBP11.85□□□□□ -0.51
MCM3-207ENST00000616552 AFAP1Q8N556 730 aa11.85□□□□□ -0.51
MCM3-207ENST00000616552 KIAA1210Q9ULL0 1709 aa11.85□□□□□ -0.51
MCM3-207ENST00000616552 ANKRD45Q5TZF3 282 aa11.84□□□□□ -0.51
MCM3-207ENST00000616552 MCTP1Q6DN14 999 aa11.84□□□□□ -0.51
MCM3-207ENST00000616552 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
MCM3-207ENST00000616552 FOXD4L6Q3SYB3 417 aaPredicted RBP11.84□□□□□ -0.51
MCM3-207ENST00000616552 FOXD4L3Q6VB84 417 aaPredicted RBP11.84□□□□□ -0.51
MCM3-207ENST00000616552 A0A0U1RQG5 324 aaPredicted RBP11.83□□□□□ -0.52
MCM3-207ENST00000616552 FAM177BA6PVY3 158 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 AAMPQ13685 434 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 RAB3GAP1Q15042 981 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 ATAD2Q6PL18 1390 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 APBB1O00213 710 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 SAMD9LQ8IVG5 1584 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 SCAPERQ9BY12 1400 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
MCM3-207ENST00000616552 RNF214Q8ND24 703 aa11.82□□□□□ -0.52
MCM3-207ENST00000616552 THUMPD2Q9BTF0 503 aaKnown RBP11.82□□□□□ -0.52
MCM3-207ENST00000616552 AK9Q5TCS8 1911 aa11.82□□□□□ -0.52
MCM3-207ENST00000616552 RBSNQ9H1K0 784 aa11.81□□□□□ -0.52
MCM3-207ENST00000616552 NSFL1CQ9UNZ2 370 aaKnown RBP11.81□□□□□ -0.52
MCM3-207ENST00000616552 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
MCM3-207ENST00000616552 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
MCM3-207ENST00000616552 SCAF11Q99590 1463 aaKnown RBP11.81□□□□□ -0.52
MCM3-207ENST00000616552 MSNP26038 577 aaKnown RBP11.81□□□□□ -0.52
MCM3-207ENST00000616552 GBP4Q96PP9 640 aa11.81□□□□□ -0.52
MCM3-207ENST00000616552 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
MCM3-207ENST00000616552 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
MCM3-207ENST00000616552 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
MCM3-207ENST00000616552 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
MCM3-207ENST00000616552 ZHX1Q9UKY1 873 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms