RNA–Protein interactions for RNA: ENST00000613308.4

RDM1-216, Transcript of RAD52 motif containing 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene RDM1, Length 779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-216ENST00000613308 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
RDM1-216ENST00000613308 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
RDM1-216ENST00000613308 ADGRL2O95490 1459 aa18.77■□□□□ 0.6
RDM1-216ENST00000613308 DDX17Q92841 729 aaKnown RBP18.77■□□□□ 0.6
RDM1-216ENST00000613308 USP21Q9UK80 565 aa18.77■□□□□ 0.6
RDM1-216ENST00000613308 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
RDM1-216ENST00000613308 MST1RQ04912 1400 aa18.76■□□□□ 0.59
RDM1-216ENST00000613308 PTPRUQ92729 1446 aa18.76■□□□□ 0.59
RDM1-216ENST00000613308 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
RDM1-216ENST00000613308 ZNF326Q5BKZ1 582 aaKnown RBP18.74■□□□□ 0.59
RDM1-216ENST00000613308 CCDC125Q86Z20 511 aa18.73■□□□□ 0.59
RDM1-216ENST00000613308 FXR2P51116 673 aaKnown RBP eCLIP18.7■□□□□ 0.58
RDM1-216ENST00000613308 NHSL1Q5SYE7 1610 aa18.68■□□□□ 0.58
RDM1-216ENST00000613308 ADGRL3Q9HAR2 1447 aa18.67■□□□□ 0.58
RDM1-216ENST00000613308 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
RDM1-216ENST00000613308 NUP155O75694 1391 aa18.67■□□□□ 0.58
RDM1-216ENST00000613308 METP08581 1390 aa18.67■□□□□ 0.58
RDM1-216ENST00000613308 UNC13BO14795 1591 aa18.66■□□□□ 0.58
RDM1-216ENST00000613308 SOS2Q07890 1332 aaPredicted RBP18.64■□□□□ 0.57
RDM1-216ENST00000613308 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
RDM1-216ENST00000613308 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
RDM1-216ENST00000613308 ORAI2Q96SN7 254 aa18.63■□□□□ 0.57
RDM1-216ENST00000613308 E9PCH4 1651 aa18.63■□□□□ 0.57
RDM1-216ENST00000613308 SETBP1Q9Y6X0 1596 aa18.62■□□□□ 0.57
RDM1-216ENST00000613308 XRN1Q8IZH2 1706 aaKnown RBP18.62■□□□□ 0.57
RDM1-216ENST00000613308 ATRNO75882 1429 aa18.6■□□□□ 0.57
RDM1-216ENST00000613308 GJD4Q96KN9 370 aaPredicted RBP18.59■□□□□ 0.57
RDM1-216ENST00000613308 SF3B2Q13435 895 aaKnown RBP18.58■□□□□ 0.56
RDM1-216ENST00000613308 ROCK1Q13464 1354 aa18.57■□□□□ 0.56
RDM1-216ENST00000613308 IQGAP3Q86VI3 1631 aa18.56■□□□□ 0.56
RDM1-216ENST00000613308 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
RDM1-216ENST00000613308 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
RDM1-216ENST00000613308 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
RDM1-216ENST00000613308 VGFO15240 615 aaPredicted RBP18.54■□□□□ 0.56
RDM1-216ENST00000613308 ITGAEP38570 1179 aa18.54■□□□□ 0.56
RDM1-216ENST00000613308 NALCNQ8IZF0 1738 aa18.52■□□□□ 0.56
RDM1-216ENST00000613308 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.56
RDM1-216ENST00000613308 BCL9LQ86UU0 1499 aa18.52■□□□□ 0.55
RDM1-216ENST00000613308 ROBO2Q9HCK4 1378 aa18.51■□□□□ 0.55
RDM1-216ENST00000613308 FOXO3O43524 673 aa18.5■□□□□ 0.55
RDM1-216ENST00000613308 UNC5CLQ8IV45 518 aa18.5■□□□□ 0.55
RDM1-216ENST00000613308 LRPPRCP42704 1394 aaKnown RBP18.5■□□□□ 0.55
RDM1-216ENST00000613308 EP400Q96L91 3159 aa18.5■□□□□ 0.55
RDM1-216ENST00000613308 LAMC1P11047 1609 aa18.49■□□□□ 0.55
RDM1-216ENST00000613308 DEFB132Q7Z7B7 95 aa18.49■□□□□ 0.55
RDM1-216ENST00000613308 MYOM2P54296 1465 aa18.48■□□□□ 0.55
RDM1-216ENST00000613308 XPCQ01831 940 aaPredicted RBP18.48■□□□□ 0.55
RDM1-216ENST00000613308 EVX2Q03828 476 aa18.48■□□□□ 0.55
RDM1-216ENST00000613308 HFM1A2PYH4 1435 aa18.48■□□□□ 0.55
RDM1-216ENST00000613308 HAP1P54257 671 aaPredicted RBP18.46■□□□□ 0.55
RDM1-216ENST00000613308 COL22A1Q8NFW1 1626 aaPredicted RBP18.45■□□□□ 0.54
RDM1-216ENST00000613308 NEXMIFQ5QGS0 1516 aa18.45■□□□□ 0.54
RDM1-216ENST00000613308 SPHKAPQ2M3C7 1700 aa18.45■□□□□ 0.54
RDM1-216ENST00000613308 SEPT12Q8IYM1 358 aa18.44■□□□□ 0.54
RDM1-216ENST00000613308 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
RDM1-216ENST00000613308 RPGRIP1LQ68CZ1 1315 aa18.43■□□□□ 0.54
RDM1-216ENST00000613308 RALGAPBQ86X10 1494 aa18.42■□□□□ 0.54
RDM1-216ENST00000613308 NUTM2FA1L443 756 aa18.42■□□□□ 0.54
RDM1-216ENST00000613308 SPDYE2BA6NHP3 402 aa18.42■□□□□ 0.54
RDM1-216ENST00000613308 SPDYE6P0CI01 402 aa18.42■□□□□ 0.54
RDM1-216ENST00000613308 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
RDM1-216ENST00000613308 BAG6P46379 1132 aa18.41■□□□□ 0.54
RDM1-216ENST00000613308 A0A0G2JS52 829 aa18.4■□□□□ 0.54
RDM1-216ENST00000613308 ZBTB22O15209 634 aa18.4■□□□□ 0.54
RDM1-216ENST00000613308 MYT1Q01538 1121 aa18.4■□□□□ 0.54
RDM1-216ENST00000613308 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
RDM1-216ENST00000613308 PXDNQ92626 1479 aa18.39■□□□□ 0.54
RDM1-216ENST00000613308 PSDA5PKW4 1024 aaPredicted RBP18.39■□□□□ 0.53
RDM1-216ENST00000613308 VPS72Q15906 364 aa18.38■□□□□ 0.53
RDM1-216ENST00000613308 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
RDM1-216ENST00000613308 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
RDM1-216ENST00000613308 PRAG1Q86YV5 1406 aa18.38■□□□□ 0.53
RDM1-216ENST00000613308 SLIT2O94813 1529 aa18.38■□□□□ 0.53
RDM1-216ENST00000613308 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
RDM1-216ENST00000613308 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
RDM1-216ENST00000613308 STK26Q9P289 416 aa18.37■□□□□ 0.53
RDM1-216ENST00000613308 HRCP23327 699 aa18.36■□□□□ 0.53
RDM1-216ENST00000613308 PLEKHG5O94827 1062 aa18.35■□□□□ 0.53
RDM1-216ENST00000613308 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
RDM1-216ENST00000613308 PSME1Q06323 249 aa18.35■□□□□ 0.53
RDM1-216ENST00000613308 KIF1BO60333 1816 aa18.35■□□□□ 0.53
RDM1-216ENST00000613308 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
RDM1-216ENST00000613308 GLI3P10071 1580 aa18.34■□□□□ 0.53
RDM1-216ENST00000613308 NAIPQ13075 1403 aa18.34■□□□□ 0.53
RDM1-216ENST00000613308 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
RDM1-216ENST00000613308 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
RDM1-216ENST00000613308 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
RDM1-216ENST00000613308 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
RDM1-216ENST00000613308 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.52
RDM1-216ENST00000613308 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.52
RDM1-216ENST00000613308 LMOD2Q6P5Q4 547 aa18.33■□□□□ 0.52
RDM1-216ENST00000613308 LRP5O75197 1615 aa18.32■□□□□ 0.52
RDM1-216ENST00000613308 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
RDM1-216ENST00000613308 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
RDM1-216ENST00000613308 EN1Q05925 392 aaPredicted RBP18.28■□□□□ 0.52
RDM1-216ENST00000613308 PHF8Q9UPP1 1060 aa18.28■□□□□ 0.52
RDM1-216ENST00000613308 R3HDM1Q15032 1099 aaKnown RBP18.27■□□□□ 0.52
RDM1-216ENST00000613308 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
RDM1-216ENST00000613308 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
RDM1-216ENST00000613308 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms