RNA–Protein interactions for RNA: ENST00000613308.4

RDM1-216, Transcript of RAD52 motif containing 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene RDM1, Length 779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-216ENST00000613308 AEBP2Q6ZN18 517 aaPredicted RBP34.61■■■■□ 3.13
RDM1-216ENST00000613308 CHIC1Q5VXU3 224 aa32.43■■■□□ 2.78
RDM1-216ENST00000613308 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
RDM1-216ENST00000613308 SENP3Q9H4L4 574 aaPredicted RBP29.68■■■□□ 2.34
RDM1-216ENST00000613308 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.26
RDM1-216ENST00000613308 ABCC9O60706 1549 aa28.42■■■□□ 2.14
RDM1-216ENST00000613308 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.03
RDM1-216ENST00000613308 FOXD1Q16676 465 aa27.7■■■□□ 2.02
RDM1-216ENST00000613308 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
RDM1-216ENST00000613308 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
RDM1-216ENST00000613308 POTEDQ86YR6 584 aa26.56■■□□□ 1.84
RDM1-216ENST00000613308 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
RDM1-216ENST00000613308 NACADO15069 1562 aa26.46■■□□□ 1.83
RDM1-216ENST00000613308 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
RDM1-216ENST00000613308 MSH5O43196 834 aa26.19■■□□□ 1.78
RDM1-216ENST00000613308 UNC13AQ9UPW8 1703 aa25.99■■□□□ 1.75
RDM1-216ENST00000613308 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
RDM1-216ENST00000613308 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
RDM1-216ENST00000613308 PIAS4Q8N2W9 510 aaPredicted RBP25.84■■□□□ 1.73
RDM1-216ENST00000613308 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
RDM1-216ENST00000613308 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
RDM1-216ENST00000613308 PLPPR3Q6T4P5 718 aa25.59■■□□□ 1.69
RDM1-216ENST00000613308 CC2D2AQ9P2K1 1620 aa25.58■■□□□ 1.69
RDM1-216ENST00000613308 PPP6R1Q9UPN7 881 aa25.43■■□□□ 1.66
RDM1-216ENST00000613308 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.66
RDM1-216ENST00000613308 ADRA2BP18089 450 aa25.37■■□□□ 1.65
RDM1-216ENST00000613308 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
RDM1-216ENST00000613308 DCAF1Q9Y4B6 1507 aa25.36■■□□□ 1.65
RDM1-216ENST00000613308 ZCCHC6Q5VYS8 1495 aaKnown RBP25.35■■□□□ 1.65
RDM1-216ENST00000613308 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
RDM1-216ENST00000613308 CUX2O14529 1486 aa24.7■■□□□ 1.55
RDM1-216ENST00000613308 ERCC6Q03468 1493 aa24.64■■□□□ 1.54
RDM1-216ENST00000613308 NCAPD3P42695 1498 aa24.46■■□□□ 1.51
RDM1-216ENST00000613308 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
RDM1-216ENST00000613308 NESP48681 1621 aa24.21■■□□□ 1.47
RDM1-216ENST00000613308 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
RDM1-216ENST00000613308 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
RDM1-216ENST00000613308 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
RDM1-216ENST00000613308 SMARCA4P51532 1647 aa24.07■■□□□ 1.44
RDM1-216ENST00000613308 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
RDM1-216ENST00000613308 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
RDM1-216ENST00000613308 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
RDM1-216ENST00000613308 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
RDM1-216ENST00000613308 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
RDM1-216ENST00000613308 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
RDM1-216ENST00000613308 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
RDM1-216ENST00000613308 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
RDM1-216ENST00000613308 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
RDM1-216ENST00000613308 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
RDM1-216ENST00000613308 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
RDM1-216ENST00000613308 WDR62O43379 1518 aa23.6■■□□□ 1.37
RDM1-216ENST00000613308 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
RDM1-216ENST00000613308 MAPK8IP2Q13387 824 aaPredicted RBP23.48■■□□□ 1.35
RDM1-216ENST00000613308 FANCD2Q9BXW9 1451 aa23.44■■□□□ 1.34
RDM1-216ENST00000613308 DMRT2Q9Y5R5 561 aa23.4■■□□□ 1.34
RDM1-216ENST00000613308 WIZO95785 1651 aa23.35■■□□□ 1.33
RDM1-216ENST00000613308 CFTRP13569 1480 aa23.3■■□□□ 1.32
RDM1-216ENST00000613308 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
RDM1-216ENST00000613308 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
RDM1-216ENST00000613308 RIMBP3CA6NJZ7 1639 aa23.18■■□□□ 1.3
RDM1-216ENST00000613308 RIMBP3BA6NNM3 1639 aa23.18■■□□□ 1.3
RDM1-216ENST00000613308 RIMBP3Q9UFD9 1639 aa23.18■■□□□ 1.3
RDM1-216ENST00000613308 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
RDM1-216ENST00000613308 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
RDM1-216ENST00000613308 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
RDM1-216ENST00000613308 IFT140Q96RY7 1462 aa23.08■■□□□ 1.29
RDM1-216ENST00000613308 TOP2AP11388 1531 aaKnown RBP23.05■■□□□ 1.28
RDM1-216ENST00000613308 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
RDM1-216ENST00000613308 ZNF608Q9ULD9 1512 aaPredicted RBP23.04■■□□□ 1.28
RDM1-216ENST00000613308 FBLN2P98095 1184 aa22.94■■□□□ 1.26
RDM1-216ENST00000613308 CACNB1Q02641 598 aaPredicted RBP22.92■■□□□ 1.26
RDM1-216ENST00000613308 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
RDM1-216ENST00000613308 ABCC8Q09428 1581 aa22.89■■□□□ 1.26
RDM1-216ENST00000613308 PRDM2Q13029 1718 aa22.86■■□□□ 1.25
RDM1-216ENST00000613308 CCDC88BA6NC98 1476 aa22.84■■□□□ 1.25
RDM1-216ENST00000613308 EIF4G3O43432 1585 aaKnown RBP22.84■■□□□ 1.25
RDM1-216ENST00000613308 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.241e-6■■■■□ 21.5
RDM1-216ENST00000613308 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
RDM1-216ENST00000613308 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
RDM1-216ENST00000613308 CHD1O14646 1710 aa22.73■■□□□ 1.23
RDM1-216ENST00000613308 DCAF8L1A6NGE4 600 aa22.68■■□□□ 1.22
RDM1-216ENST00000613308 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
RDM1-216ENST00000613308 CHMP7Q8WUX9 453 aaPredicted RBP22.66■■□□□ 1.22
RDM1-216ENST00000613308 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.21
RDM1-216ENST00000613308 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
RDM1-216ENST00000613308 SOGA1O94964 1423 aa22.61■■□□□ 1.21
RDM1-216ENST00000613308 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
RDM1-216ENST00000613308 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
RDM1-216ENST00000613308 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
RDM1-216ENST00000613308 CLASP1Q7Z460 1538 aa22.49■■□□□ 1.19
RDM1-216ENST00000613308 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
RDM1-216ENST00000613308 WDR97A6NE52 1622 aa22.44■■□□□ 1.18
RDM1-216ENST00000613308 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
RDM1-216ENST00000613308 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
RDM1-216ENST00000613308 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
RDM1-216ENST00000613308 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
RDM1-216ENST00000613308 PPP4R3CPQ6ZMV5 832 aa22.36■■□□□ 1.17
RDM1-216ENST00000613308 CUX1P39880 1505 aa22.28■■□□□ 1.16
RDM1-216ENST00000613308 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
RDM1-216ENST00000613308 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms