RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 NUDCQ9Y266 331 aa23.97■■□□□ 1.43
SEMA6C-209ENST00000613223 HDGFP51858 240 aaKnown RBP23.96■■□□□ 1.43
SEMA6C-209ENST00000613223 POGKQ9P215 609 aa23.96■■□□□ 1.43
SEMA6C-209ENST00000613223 ANKRD36BQ8N2N9 1353 aa23.96■■□□□ 1.43
SEMA6C-209ENST00000613223 NLRP1Q9C000 1473 aa23.96■■□□□ 1.43
SEMA6C-209ENST00000613223 CABP2Q9NPB3 220 aa23.94■■□□□ 1.42
SEMA6C-209ENST00000613223 ATAD2Q6PL18 1390 aa23.93■■□□□ 1.42
SEMA6C-209ENST00000613223 TMEM2Q9UHN6 1383 aa23.93■■□□□ 1.42
SEMA6C-209ENST00000613223 FER1L4A9Z1Z3 1794 aa23.92■■□□□ 1.42
SEMA6C-209ENST00000613223 ABCC11Q96J66 1382 aa23.92■■□□□ 1.42
SEMA6C-209ENST00000613223 C3P01024 1663 aa23.92■■□□□ 1.42
SEMA6C-209ENST00000613223 MINK1Q8N4C8 1332 aaPredicted RBP23.92■■□□□ 1.42
SEMA6C-209ENST00000613223 SRPK2P78362 688 aaKnown RBP23.91■■□□□ 1.42
SEMA6C-209ENST00000613223 WDR43Q15061 677 aaKnown RBP eCLIP23.91■■□□□ 1.42
SEMA6C-209ENST00000613223 SENP3-EIF4A1A0A087X0R7 540 aa23.9■■□□□ 1.42
SEMA6C-209ENST00000613223 CGNL1Q0VF96 1302 aa23.9■■□□□ 1.42
SEMA6C-209ENST00000613223 ADAMTS8Q9UP79 889 aa23.89■■□□□ 1.41
SEMA6C-209ENST00000613223 NSD2O96028 1365 aa23.88■■□□□ 1.41
SEMA6C-209ENST00000613223 PDE3BQ13370 1112 aa23.88■■□□□ 1.41
SEMA6C-209ENST00000613223 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
SEMA6C-209ENST00000613223 METP08581 1390 aa23.87■■□□□ 1.41
SEMA6C-209ENST00000613223 ERICH6BQ5W0A0 696 aa23.87■■□□□ 1.41
SEMA6C-209ENST00000613223 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
SEMA6C-209ENST00000613223 A0A1W2PP64 1363 aa23.85■■□□□ 1.41
SEMA6C-209ENST00000613223 CEBPAP49715 358 aaPredicted RBP23.85■■□□□ 1.41
SEMA6C-209ENST00000613223 TECPR2O15040 1411 aa23.84■■□□□ 1.41
SEMA6C-209ENST00000613223 POLR3AO14802 1390 aaPredicted RBP23.84■■□□□ 1.41
SEMA6C-209ENST00000613223 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.41
SEMA6C-209ENST00000613223 CDK19Q9BWU1 502 aa23.83■■□□□ 1.41
SEMA6C-209ENST00000613223 CPS1P31327 1500 aa23.82■■□□□ 1.4
SEMA6C-209ENST00000613223 IRX6P78412 446 aaPredicted RBP23.82■■□□□ 1.4
SEMA6C-209ENST00000613223 FAM135BQ49AJ0 1406 aa23.82■■□□□ 1.4
SEMA6C-209ENST00000613223 PLEKHG1Q9ULL1 1385 aa23.81■■□□□ 1.4
SEMA6C-209ENST00000613223 WAPLQ7Z5K2 1190 aa23.81■■□□□ 1.4
SEMA6C-209ENST00000613223 SIRT1Q96EB6 747 aa23.81■■□□□ 1.4
SEMA6C-209ENST00000613223 TERF2IPQ9NYB0 399 aa23.81■■□□□ 1.4
SEMA6C-209ENST00000613223 SALL2Q9Y467 1007 aaPredicted RBP23.81■■□□□ 1.4
SEMA6C-209ENST00000613223 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
SEMA6C-209ENST00000613223 ANP32EQ9BTT0 268 aa23.8■■□□□ 1.4
SEMA6C-209ENST00000613223 RNF123Q5XPI4 1314 aa23.8■■□□□ 1.4
SEMA6C-209ENST00000613223 ADAMTS13Q76LX8 1427 aa23.8■■□□□ 1.4
SEMA6C-209ENST00000613223 SLIT1O75093 1534 aa23.79■■□□□ 1.4
SEMA6C-209ENST00000613223 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
SEMA6C-209ENST00000613223 RBM19Q9Y4C8 960 aaKnown RBP23.76■■□□□ 1.39
SEMA6C-209ENST00000613223 LTKP29376 864 aa23.76■■□□□ 1.39
SEMA6C-209ENST00000613223 HDGFL2Q7Z4V5 671 aaPredicted RBP23.75■■□□□ 1.39
SEMA6C-209ENST00000613223 MED14O60244 1454 aa23.75■■□□□ 1.39
SEMA6C-209ENST00000613223 SHPRHQ149N8 1683 aa23.74■■□□□ 1.39
SEMA6C-209ENST00000613223 ATP7BP35670 1465 aa23.74■■□□□ 1.39
SEMA6C-209ENST00000613223 TXNDC2Q86VQ3 553 aa23.74■■□□□ 1.39
SEMA6C-209ENST00000613223 ANKRD26Q9UPS8 1709 aa23.74■■□□□ 1.39
SEMA6C-209ENST00000613223 TNNT2P45379 298 aaPredicted RBP23.74■■□□□ 1.39
SEMA6C-209ENST00000613223 EID1Q9Y6B2 187 aa23.74■■□□□ 1.39
SEMA6C-209ENST00000613223 WASLO00401 505 aaPredicted RBP23.72■■□□□ 1.39
SEMA6C-209ENST00000613223 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
SEMA6C-209ENST00000613223 CDCA7LQ96GN5 454 aa23.71■■□□□ 1.39
SEMA6C-209ENST00000613223 PPP4R2Q9NY27 417 aa23.7■■□□□ 1.38
SEMA6C-209ENST00000613223 PLPPR3Q6T4P5 718 aa23.69■■□□□ 1.38
SEMA6C-209ENST00000613223 THEMISQ8N1K5 641 aaPredicted RBP23.69■■□□□ 1.38
SEMA6C-209ENST00000613223 CFAP53Q96M91 514 aa23.69■■□□□ 1.38
SEMA6C-209ENST00000613223 KIF20BQ96Q89 1820 aa23.69■■□□□ 1.38
SEMA6C-209ENST00000613223 ZNF521Q96K83 1311 aa23.69■■□□□ 1.38
SEMA6C-209ENST00000613223 MTHFSP49914 203 aa23.69■■□□□ 1.38
SEMA6C-209ENST00000613223 ROBO2Q9HCK4 1378 aa23.68■■□□□ 1.38
SEMA6C-209ENST00000613223 CCDC146Q8IYE0 955 aa23.67■■□□□ 1.38
SEMA6C-209ENST00000613223 ADGRB2O60241 1585 aa23.67■■□□□ 1.38
SEMA6C-209ENST00000613223 FYB1O15117 783 aa23.67■■□□□ 1.38
SEMA6C-209ENST00000613223 RCAN3Q9UKA8 241 aa23.67■■□□□ 1.38
SEMA6C-209ENST00000613223 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
SEMA6C-209ENST00000613223 NGEFQ8N5V2 710 aa23.66■■□□□ 1.38
SEMA6C-209ENST00000613223 GGNBP2Q9H3C7 697 aa23.66■■□□□ 1.38
SEMA6C-209ENST00000613223 DIP2AQ14689 1571 aa23.66■■□□□ 1.38
SEMA6C-209ENST00000613223 PPIP5K1Q6PFW1 1433 aa23.65■■□□□ 1.38
SEMA6C-209ENST00000613223 CEP170BQ9Y4F5 1589 aaPredicted RBP23.65■■□□□ 1.38
SEMA6C-209ENST00000613223 CPSF1Q10570 1443 aaKnown RBP23.64■■□□□ 1.37
SEMA6C-209ENST00000613223 APAF1O14727 1248 aa23.63■■□□□ 1.37
SEMA6C-209ENST00000613223 DNAJC5Q9H3Z4 198 aa23.63■■□□□ 1.37
SEMA6C-209ENST00000613223 CDC42BPGQ6DT37 1551 aa23.63■■□□□ 1.37
SEMA6C-209ENST00000613223 PTPRUQ92729 1446 aa23.62■■□□□ 1.37
SEMA6C-209ENST00000613223 TBX22Q9Y458 520 aa23.62■■□□□ 1.37
SEMA6C-209ENST00000613223 GOLGA2Q08379 1002 aa23.61■■□□□ 1.37
SEMA6C-209ENST00000613223 NUDT16Q96DE0 195 aaKnown RBP23.61■■□□□ 1.37
SEMA6C-209ENST00000613223 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
SEMA6C-209ENST00000613223 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.61■■□□□ 1.37
SEMA6C-209ENST00000613223 RRP1P56182 461 aaKnown RBP23.61■■□□□ 1.37
SEMA6C-209ENST00000613223 EDC4Q6P2E9 1401 aaKnown RBP23.61■■□□□ 1.37
SEMA6C-209ENST00000613223 ADAMTSL3P82987 1691 aa23.6■■□□□ 1.37
SEMA6C-209ENST00000613223 CCDC61Q9Y6R9 512 aa23.6■■□□□ 1.37
SEMA6C-209ENST00000613223 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
SEMA6C-209ENST00000613223 MON2Q7Z3U7 1717 aa23.58■■□□□ 1.37
SEMA6C-209ENST00000613223 COL3A1P02461 1466 aaPredicted RBP23.58■■□□□ 1.36
SEMA6C-209ENST00000613223 IQSEC2Q5JU85 1478 aa23.57■■□□□ 1.36
SEMA6C-209ENST00000613223 DUSP27Q5VZP5 1158 aa23.57■■□□□ 1.36
SEMA6C-209ENST00000613223 RUNDC1Q96C34 613 aa23.57■■□□□ 1.36
SEMA6C-209ENST00000613223 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
SEMA6C-209ENST00000613223 ZNF142P52746 1687 aaPredicted RBP23.56■■□□□ 1.36
SEMA6C-209ENST00000613223 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
SEMA6C-209ENST00000613223 SLFN5Q08AF3 891 aa23.55■■□□□ 1.36
SEMA6C-209ENST00000613223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.55■■□□□ 1.36
SEMA6C-209ENST00000613223 AMOTL2Q9Y2J4 779 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms