RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 KIF1BO60333 1816 aa15.27■□□□□ 0.03
PPARGC1A-216ENST00000612355 PXDNQ92626 1479 aa15.25■□□□□ 0.03
PPARGC1A-216ENST00000612355 ROBO2Q9HCK4 1378 aa15.24■□□□□ 0.03
PPARGC1A-216ENST00000612355 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
PPARGC1A-216ENST00000612355 ORAI2Q96SN7 254 aa15.24■□□□□ 0.03
PPARGC1A-216ENST00000612355 GLI3P10071 1580 aa15.23■□□□□ 0.03
PPARGC1A-216ENST00000612355 BRWD3Q6RI45 1802 aa15.22■□□□□ 0.03
PPARGC1A-216ENST00000612355 ZNF326Q5BKZ1 582 aaKnown RBP15.22■□□□□ 0.03
PPARGC1A-216ENST00000612355 HFM1A2PYH4 1435 aa15.22■□□□□ 0.03
PPARGC1A-216ENST00000612355 BLMP54132 1417 aaPredicted RBP15.22■□□□□ 0.03
PPARGC1A-216ENST00000612355 SLIT2O94813 1529 aa15.2■□□□□ 0.02
PPARGC1A-216ENST00000612355 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
PPARGC1A-216ENST00000612355 PPLO60437 1756 aa15.19■□□□□ 0.02
PPARGC1A-216ENST00000612355 GJD4Q96KN9 370 aaPredicted RBP15.18■□□□□ 0.02
PPARGC1A-216ENST00000612355 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
PPARGC1A-216ENST00000612355 USP32Q8NFA0 1604 aa15.17■□□□□ 0.02
PPARGC1A-216ENST00000612355 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
PPARGC1A-216ENST00000612355 KIF1AQ12756 1690 aa15.14■□□□□ 0.01
PPARGC1A-216ENST00000612355 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
PPARGC1A-216ENST00000612355 UNC5CLQ8IV45 518 aa15.13■□□□□ 0.01
PPARGC1A-216ENST00000612355 PLCH1Q4KWH8 1693 aa15.12■□□□□ 0.01
PPARGC1A-216ENST00000612355 LRPPRCP42704 1394 aaKnown RBP15.12■□□□□ 0.01
PPARGC1A-216ENST00000612355 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
PPARGC1A-216ENST00000612355 TECPR2O15040 1411 aa15.12■□□□□ 0.01
PPARGC1A-216ENST00000612355 ABCA3Q99758 1704 aa15.12■□□□□ 0.01
PPARGC1A-216ENST00000612355 FMN2Q9NZ56 1722 aa15.12■□□□□ 0.01
PPARGC1A-216ENST00000612355 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
PPARGC1A-216ENST00000612355 NAIPQ13075 1403 aa15.1■□□□□ 0.01
PPARGC1A-216ENST00000612355 DEFB132Q7Z7B7 95 aa15.1■□□□□ 0.01
PPARGC1A-216ENST00000612355 RPGRIP1LQ68CZ1 1315 aa15.1■□□□□ 0.01
PPARGC1A-216ENST00000612355 FOXO3O43524 673 aa15.09■□□□□ 0.01
PPARGC1A-216ENST00000612355 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
PPARGC1A-216ENST00000612355 SPATA31A3Q5VYP0 1347 aa15.08■□□□□ 0
PPARGC1A-216ENST00000612355 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
PPARGC1A-216ENST00000612355 XPCQ01831 940 aaPredicted RBP15.07■□□□□ 0
PPARGC1A-216ENST00000612355 IFT172Q9UG01 1749 aa15.06■□□□□ 0
PPARGC1A-216ENST00000612355 SEPT12Q8IYM1 358 aa15.06■□□□□ 0
PPARGC1A-216ENST00000612355 NRAPQ86VF7 1730 aa15.06■□□□□ 0
PPARGC1A-216ENST00000612355 SF3B2Q13435 895 aaKnown RBP15.05■□□□□ -0
PPARGC1A-216ENST00000612355 VPS72Q15906 364 aa15.05■□□□□ -0
PPARGC1A-216ENST00000612355 RGPD1P0DJD0 1748 aa15.05■□□□□ -0
PPARGC1A-216ENST00000612355 RGPD8O14715 1765 aaPredicted RBP15.04■□□□□ -0
PPARGC1A-216ENST00000612355 TNS3Q68CZ2 1445 aa15.04■□□□□ -0
PPARGC1A-216ENST00000612355 HRCP23327 699 aa15.03■□□□□ -0
PPARGC1A-216ENST00000612355 ITGAEP38570 1179 aa15.03■□□□□ -0
PPARGC1A-216ENST00000612355 RRBP1Q9P2E9 1410 aaKnown RBP15.02■□□□□ -0
PPARGC1A-216ENST00000612355 ABCC11Q96J66 1382 aa15.02■□□□□ -0
PPARGC1A-216ENST00000612355 DISP2A7MBM2 1401 aa15.01□□□□□ -0.01
PPARGC1A-216ENST00000612355 TNS1Q9HBL0 1735 aaKnown RBP15.01□□□□□ -0.01
PPARGC1A-216ENST00000612355 KRT27Q7Z3Y8 459 aa15.01□□□□□ -0.01
PPARGC1A-216ENST00000612355 PLEKHH1Q9ULM0 1364 aa15□□□□□ -0.01
PPARGC1A-216ENST00000612355 BAG6P46379 1132 aa14.99□□□□□ -0.01
PPARGC1A-216ENST00000612355 NRXN1Q9ULB1 1477 aa14.99□□□□□ -0.01
PPARGC1A-216ENST00000612355 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
PPARGC1A-216ENST00000612355 PSDA5PKW4 1024 aaPredicted RBP14.98□□□□□ -0.01
PPARGC1A-216ENST00000612355 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
PPARGC1A-216ENST00000612355 PIK3C2GO75747 1445 aa14.98□□□□□ -0.01
PPARGC1A-216ENST00000612355 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
PPARGC1A-216ENST00000612355 ADGRF5Q8IZF2 1346 aa14.97□□□□□ -0.01
PPARGC1A-216ENST00000612355 THSD7AQ9UPZ6 1657 aa14.97□□□□□ -0.01
PPARGC1A-216ENST00000612355 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
PPARGC1A-216ENST00000612355 KRT28Q7Z3Y7 464 aa14.97□□□□□ -0.01
PPARGC1A-216ENST00000612355 SPATA31E1Q6ZUB1 1445 aa14.97□□□□□ -0.01
PPARGC1A-216ENST00000612355 TRPM3Q9HCF6 1732 aaPredicted RBP14.97□□□□□ -0.01
PPARGC1A-216ENST00000612355 COL14A1Q05707 1796 aaKnown RBP14.96□□□□□ -0.01
PPARGC1A-216ENST00000612355 YTHDC2Q9H6S0 1430 aaKnown RBP14.96□□□□□ -0.01
PPARGC1A-216ENST00000612355 ANKRD30BQ9BXX2 1392 aa14.96□□□□□ -0.02
PPARGC1A-216ENST00000612355 CRYBG1Q9Y4K1 1723 aa14.95□□□□□ -0.02
PPARGC1A-216ENST00000612355 ALS2Q96Q42 1657 aa14.95□□□□□ -0.02
PPARGC1A-216ENST00000612355 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
PPARGC1A-216ENST00000612355 PSME1Q06323 249 aa14.94□□□□□ -0.02
PPARGC1A-216ENST00000612355 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
PPARGC1A-216ENST00000612355 HAP1P54257 671 aaPredicted RBP14.93□□□□□ -0.02
PPARGC1A-216ENST00000612355 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
PPARGC1A-216ENST00000612355 STK26Q9P289 416 aa14.93□□□□□ -0.02
PPARGC1A-216ENST00000612355 PHF8Q9UPP1 1060 aa14.93□□□□□ -0.02
PPARGC1A-216ENST00000612355 CCDC9Q9Y3X0 531 aaKnown RBP14.93□□□□□ -0.02
PPARGC1A-216ENST00000612355 FAM83GA6ND36 823 aa14.92□□□□□ -0.02
PPARGC1A-216ENST00000612355 RREB1Q92766 1687 aa14.92□□□□□ -0.02
PPARGC1A-216ENST00000612355 ANKARQ7Z5J8 1434 aa14.91□□□□□ -0.02
PPARGC1A-216ENST00000612355 EN1Q05925 392 aaPredicted RBP14.9□□□□□ -0.02
PPARGC1A-216ENST00000612355 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
PPARGC1A-216ENST00000612355 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
PPARGC1A-216ENST00000612355 SLC4A1APQ9BWU0 796 aaKnown RBP14.9□□□□□ -0.02
PPARGC1A-216ENST00000612355 R3HDM1Q15032 1099 aaKnown RBP14.89□□□□□ -0.03
PPARGC1A-216ENST00000612355 DLC1Q96QB1 1528 aa14.88□□□□□ -0.03
PPARGC1A-216ENST00000612355 NUP188Q5SRE5 1749 aa14.88□□□□□ -0.03
PPARGC1A-216ENST00000612355 SPATA31A5Q5VU36 1347 aa14.88□□□□□ -0.03
PPARGC1A-216ENST00000612355 SPATA31A7Q8IWB4 1347 aa14.88□□□□□ -0.03
PPARGC1A-216ENST00000612355 PARD3Q8TEW0 1356 aa14.87□□□□□ -0.03
PPARGC1A-216ENST00000612355 A0A0G2JS52 829 aa14.87□□□□□ -0.03
PPARGC1A-216ENST00000612355 MYT1Q01538 1121 aa14.87□□□□□ -0.03
PPARGC1A-216ENST00000612355 BTG4Q9NY30 223 aa14.87□□□□□ -0.03
PPARGC1A-216ENST00000612355 UTRNP46939 3433 aa14.86□□□□□ -0.03
PPARGC1A-216ENST00000612355 CAMKK2Q96RR4 588 aa14.85□□□□□ -0.03
PPARGC1A-216ENST00000612355 EZH2Q15910 746 aaKnown RBP14.84□□□□□ -0.03
PPARGC1A-216ENST00000612355 LMOD2Q6P5Q4 547 aa14.84□□□□□ -0.03
PPARGC1A-216ENST00000612355 C14orf93Q9H972 538 aaKnown RBP14.84□□□□□ -0.03
PPARGC1A-216ENST00000612355 RGL3Q3MIN7 710 aa14.83□□□□□ -0.04
PPARGC1A-216ENST00000612355 FAM182BQ5T319 152 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms