RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 MINK1Q8N4C8 1332 aaPredicted RBP30.95■■■□□ 2.55
COMMD7-204ENST00000610160 FAM135BQ49AJ0 1406 aa30.95■■■□□ 2.55
COMMD7-204ENST00000610160 KNSTRNQ9Y448 316 aa30.95■■■□□ 2.54
COMMD7-204ENST00000610160 PLEKHH1Q9ULM0 1364 aa30.94■■■□□ 2.54
COMMD7-204ENST00000610160 MYBBP1AQ9BQG0 1328 aaKnown RBP30.93■■■□□ 2.54
COMMD7-204ENST00000610160 SIRT1Q96EB6 747 aa30.92■■■□□ 2.54
COMMD7-204ENST00000610160 WAPLQ7Z5K2 1190 aa30.91■■■□□ 2.54
COMMD7-204ENST00000610160 CC2D1BQ5T0F9 858 aaKnown RBP30.9■■■□□ 2.54
COMMD7-204ENST00000610160 CABP2Q9NPB3 220 aa30.9■■■□□ 2.54
COMMD7-204ENST00000610160 AMER1Q5JTC6 1135 aaPredicted RBP30.89■■■□□ 2.54
COMMD7-204ENST00000610160 SLC26A8Q96RN1 970 aa30.89■■■□□ 2.54
COMMD7-204ENST00000610160 NPC1L1Q9UHC9 1359 aa30.89■■■□□ 2.54
COMMD7-204ENST00000610160 TBX22Q9Y458 520 aa30.88■■■□□ 2.53
COMMD7-204ENST00000610160 TMC1Q8TDI8 760 aa30.88■■■□□ 2.53
COMMD7-204ENST00000610160 ATAD2Q6PL18 1390 aa30.88■■■□□ 2.53
COMMD7-204ENST00000610160 NINLQ9Y2I6 1382 aa30.88■■■□□ 2.53
COMMD7-204ENST00000610160 SRPK2P78362 688 aaKnown RBP30.87■■■□□ 2.53
COMMD7-204ENST00000610160 SLC12A5Q9H2X9 1139 aa30.86■■■□□ 2.53
COMMD7-204ENST00000610160 PTPRUQ92729 1446 aa30.86■■■□□ 2.53
COMMD7-204ENST00000610160 BRD4O60885 1362 aaPredicted RBP30.85■■■□□ 2.53
COMMD7-204ENST00000610160 ROBO2Q9HCK4 1378 aa30.85■■■□□ 2.53
COMMD7-204ENST00000610160 CARD14Q9BXL6 1004 aa30.85■■■□□ 2.53
COMMD7-204ENST00000610160 USP32Q8NFA0 1604 aa30.83■■■□□ 2.53
COMMD7-204ENST00000610160 ANKRD36BQ8N2N9 1353 aa30.82■■■□□ 2.52
COMMD7-204ENST00000610160 ANKLE2Q86XL3 938 aa30.82■■■□□ 2.52
COMMD7-204ENST00000610160 CDK19Q9BWU1 502 aa30.82■■■□□ 2.52
COMMD7-204ENST00000610160 XRN1Q8IZH2 1706 aaKnown RBP30.81■■■□□ 2.52
COMMD7-204ENST00000610160 NSD3Q9BZ95 1437 aa30.81■■■□□ 2.52
COMMD7-204ENST00000610160 NLRP13Q86W25 1043 aa30.81■■■□□ 2.52
COMMD7-204ENST00000610160 PTCH1Q13635 1447 aa30.8■■■□□ 2.52
COMMD7-204ENST00000610160 ADGRB2O60241 1585 aa30.8■■■□□ 2.52
COMMD7-204ENST00000610160 PIK3R4Q99570 1358 aa30.77■■■□□ 2.52
COMMD7-204ENST00000610160 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.76■■■□□ 2.52
COMMD7-204ENST00000610160 FAM9BQ8IZU0 186 aa30.76■■■□□ 2.51
COMMD7-204ENST00000610160 AMOTL2Q9Y2J4 779 aa30.75■■■□□ 2.51
COMMD7-204ENST00000610160 WASLO00401 505 aaPredicted RBP30.74■■■□□ 2.51
COMMD7-204ENST00000610160 A0A1W2PP64 1363 aa30.73■■■□□ 2.51
COMMD7-204ENST00000610160 CD163L1Q9NR16 1453 aa30.73■■■□□ 2.51
COMMD7-204ENST00000610160 PNISRQ8TF01 805 aaKnown RBP30.7■■■□□ 2.5
COMMD7-204ENST00000610160 CHD2O14647 1828 aaKnown RBP30.69■■■□□ 2.5
COMMD7-204ENST00000610160 NPHP4O75161 1426 aaPredicted RBP30.68■■■□□ 2.5
COMMD7-204ENST00000610160 ATP7BP35670 1465 aa30.68■■■□□ 2.5
COMMD7-204ENST00000610160 TERF2IPQ9NYB0 399 aa30.68■■■□□ 2.5
COMMD7-204ENST00000610160 HNRNPUQ00839 825 aaKnown RBP eCLIP30.67■■■□□ 2.5
COMMD7-204ENST00000610160 CGNL1Q0VF96 1302 aa30.67■■■□□ 2.5
COMMD7-204ENST00000610160 PPP2R1AP30153 589 aa30.66■■■□□ 2.5
COMMD7-204ENST00000610160 CABP1Q9NZU7 370 aa30.65■■■□□ 2.5
COMMD7-204ENST00000610160 NSD2O96028 1365 aa30.64■■■□□ 2.5
COMMD7-204ENST00000610160 PPIP5K1Q6PFW1 1433 aa30.63■■■□□ 2.49
COMMD7-204ENST00000610160 HDGFL2Q7Z4V5 671 aaPredicted RBP30.61■■■□□ 2.49
COMMD7-204ENST00000610160 TOPAZ1Q8N9V7 1692 aa30.61■■■□□ 2.49
COMMD7-204ENST00000610160 KCNA6P17658 529 aa30.61■■■□□ 2.49
COMMD7-204ENST00000610160 NUDT16Q96DE0 195 aaKnown RBP30.59■■■□□ 2.49
COMMD7-204ENST00000610160 CDC42BPGQ6DT37 1551 aa30.59■■■□□ 2.49
COMMD7-204ENST00000610160 ANKRD26Q9UPS8 1709 aa30.59■■■□□ 2.49
COMMD7-204ENST00000610160 KDM4FA0A1W2PPD8 638 aa30.57■■■□□ 2.48
COMMD7-204ENST00000610160 PRR36Q9H6K5 1346 aa30.56■■■□□ 2.48
COMMD7-204ENST00000610160 NCKAP5LQ9HCH0 1330 aa30.56■■■□□ 2.48
COMMD7-204ENST00000610160 CPSF1Q10570 1443 aaKnown RBP30.56■■■□□ 2.48
COMMD7-204ENST00000610160 CCDC61Q9Y6R9 512 aa30.56■■■□□ 2.48
COMMD7-204ENST00000610160 KIF20BQ96Q89 1820 aa30.56■■■□□ 2.48
COMMD7-204ENST00000610160 ITSN1Q15811 1721 aa30.56■■■□□ 2.48
COMMD7-204ENST00000610160 MORC1Q86VD1 984 aa30.55■■■□□ 2.48
COMMD7-204ENST00000610160 AKAP12Q02952 1782 aa30.55■■■□□ 2.48
COMMD7-204ENST00000610160 MON2Q7Z3U7 1717 aa30.54■■■□□ 2.48
COMMD7-204ENST00000610160 NWD1Q149M9 1564 aa30.53■■■□□ 2.48
COMMD7-204ENST00000610160 ZBED9Q6R2W3 1325 aa30.5■■■□□ 2.47
COMMD7-204ENST00000610160 NALCNQ8IZF0 1738 aa30.5■■■□□ 2.47
COMMD7-204ENST00000610160 INSRP06213 1382 aa30.49■■■□□ 2.47
COMMD7-204ENST00000610160 EDC4Q6P2E9 1401 aaKnown RBP30.49■■■□□ 2.47
COMMD7-204ENST00000610160 FMN2Q9NZ56 1722 aa30.47■■■□□ 2.47
COMMD7-204ENST00000610160 FYB1O15117 783 aa30.46■■■□□ 2.47
COMMD7-204ENST00000610160 NKTRP30414 1462 aaKnown RBP30.45■■■□□ 2.47
COMMD7-204ENST00000610160 GGNBP2Q9H3C7 697 aa30.44■■■□□ 2.46
COMMD7-204ENST00000610160 LMTK3Q96Q04 1460 aa30.44■■■□□ 2.46
COMMD7-204ENST00000610160 BLMP54132 1417 aaPredicted RBP30.43■■■□□ 2.46
COMMD7-204ENST00000610160 POLR3AO14802 1390 aaPredicted RBP30.43■■■□□ 2.46
COMMD7-204ENST00000610160 RGPD8O14715 1765 aaPredicted RBP30.43■■■□□ 2.46
COMMD7-204ENST00000610160 ANKARQ7Z5J8 1434 aa30.43■■■□□ 2.46
COMMD7-204ENST00000610160 NRKQ7Z2Y5 1582 aa30.43■■■□□ 2.46
COMMD7-204ENST00000610160 TNNT2P45379 298 aaPredicted RBP30.43■■■□□ 2.46
COMMD7-204ENST00000610160 NUTM2FA1L443 756 aa30.42■■■□□ 2.46
COMMD7-204ENST00000610160 PLEKHG3A1L390 1219 aa30.41■■■□□ 2.46
COMMD7-204ENST00000610160 ZNF692Q9BU19 519 aaPredicted RBP30.4■■■□□ 2.46
COMMD7-204ENST00000610160 ADGRL3Q9HAR2 1447 aa30.4■■■□□ 2.46
COMMD7-204ENST00000610160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.39■■■□□ 2.46
COMMD7-204ENST00000610160 HSPA2P54652 639 aa30.38■■■□□ 2.45
COMMD7-204ENST00000610160 WDR43Q15061 677 aaKnown RBP eCLIP30.38■■■□□ 2.45
COMMD7-204ENST00000610160 ACEP12821 1306 aa30.36■■■□□ 2.45
COMMD7-204ENST00000610160 SHPRHQ149N8 1683 aa30.36■■■□□ 2.45
COMMD7-204ENST00000610160 SCAF1Q9H7N4 1312 aaKnown RBP30.36■■■□□ 2.45
COMMD7-204ENST00000610160 ADAMTS8Q9UP79 889 aa30.35■■■□□ 2.45
COMMD7-204ENST00000610160 USP6P35125 1406 aa30.34■■■□□ 2.45
COMMD7-204ENST00000610160 GTF3C3Q9Y5Q9 886 aa30.34■■■□□ 2.45
COMMD7-204ENST00000610160 MTHFSP49914 203 aa30.33■■■□□ 2.45
COMMD7-204ENST00000610160 RBM33Q96EV2 1170 aaKnown RBP30.31■■■□□ 2.44
COMMD7-204ENST00000610160 STRCQ7RTU9 1775 aa30.3■■■□□ 2.44
COMMD7-204ENST00000610160 NME9Q86XW9 330 aa30.3■■■□□ 2.44
COMMD7-204ENST00000610160 STRCP1A6NGW2 1772 aa30.29■■■□□ 2.44
COMMD7-204ENST00000610160 CFAP53Q96M91 514 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms