RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 NISCHQ9Y2I1 1504 aa51.65■■■■■ 5.86
COMMD7-204ENST00000610160 CCDC180Q9P1Z9 1646 aa45.13■■■■■ 4.81
COMMD7-204ENST00000610160 ZCCHC6Q5VYS8 1495 aaKnown RBP43.42■■■■■ 4.54
COMMD7-204ENST00000610160 DCAF1Q9Y4B6 1507 aa42.74■■■■■ 4.43
COMMD7-204ENST00000610160 ABCC9O60706 1549 aa42.61■■■■■ 4.41
COMMD7-204ENST00000610160 DCAF8L2P0C7V8 631 aa42.54■■■■■ 4.4
COMMD7-204ENST00000610160 MYO15BQ96JP2 1530 aa42.25■■■■■ 4.35
COMMD7-204ENST00000610160 SHROOM4Q9ULL8 1493 aa42.05■■■■■ 4.32
COMMD7-204ENST00000610160 NACADO15069 1562 aa41.99■■■■■ 4.31
COMMD7-204ENST00000610160 RB1CC1Q8TDY2 1594 aa41.64■■■■■ 4.26
COMMD7-204ENST00000610160 SCRIBQ14160 1630 aa41.45■■■■■ 4.23
COMMD7-204ENST00000610160 UNC13AQ9UPW8 1703 aa40.86■■■■■ 4.13
COMMD7-204ENST00000610160 SUPT5HO00267 1087 aaKnown RBP40.41■■■■■ 4.06
COMMD7-204ENST00000610160 BICRAQ9NZM4 1560 aa40.39■■■■■ 4.06
COMMD7-204ENST00000610160 CECR2Q9BXF3 1484 aa40.12■■■■■ 4.01
COMMD7-204ENST00000610160 PABPN1Q86U42 306 aaKnown RBP eCLIP40.12■■■■■ 4.01
COMMD7-204ENST00000610160 RSF1Q96T23 1441 aaPredicted RBP40.03■■■■■ 4
COMMD7-204ENST00000610160 BAZ1AQ9NRL2 1556 aaPredicted RBP39.91■■■■□ 3.98
COMMD7-204ENST00000610160 MROH2BQ7Z745 1585 aa39.9■■■■□ 3.98
COMMD7-204ENST00000610160 SMARCA4P51532 1647 aa39.75■■■■□ 3.95
COMMD7-204ENST00000610160 WIZO95785 1651 aa39.6■■■■□ 3.93
COMMD7-204ENST00000610160 PEG3Q9GZU2 1588 aa39.27■■■■□ 3.88
COMMD7-204ENST00000610160 TOP2AP11388 1531 aaKnown RBP39.2■■■■□ 3.87
COMMD7-204ENST00000610160 EIF4G1Q04637 1599 aaKnown RBP39.17■■■■□ 3.86
COMMD7-204ENST00000610160 SMARCA2P51531 1590 aa39.06■■■■□ 3.84
COMMD7-204ENST00000610160 ATAD2BQ9ULI0 1458 aa39.06■■■■□ 3.84
COMMD7-204ENST00000610160 BAZ1BQ9UIG0 1483 aaKnown RBP38.85■■■■□ 3.81
COMMD7-204ENST00000610160 CCDC88BA6NC98 1476 aa38.74■■■■□ 3.79
COMMD7-204ENST00000610160 NCAPD3P42695 1498 aa38.72■■■■□ 3.79
COMMD7-204ENST00000610160 HMGXB3Q12766 1538 aa38.72■■■■□ 3.79
COMMD7-204ENST00000610160 CHIC1Q5VXU3 224 aa38.68■■■■□ 3.78
COMMD7-204ENST00000610160 CC2D2AQ9P2K1 1620 aa38.6■■■■□ 3.77
COMMD7-204ENST00000610160 TRIM41Q8WV44 630 aa38■■■■□ 3.67
COMMD7-204ENST00000610160 ABCC8Q09428 1581 aa37.95■■■■□ 3.67
COMMD7-204ENST00000610160 CFTRP13569 1480 aa37.87■■■■□ 3.65
COMMD7-204ENST00000610160 PRDM2Q13029 1718 aa37.77■■■■□ 3.64
COMMD7-204ENST00000610160 CADPSQ9ULU8 1353 aa37.71■■■■□ 3.63
COMMD7-204ENST00000610160 WRNQ14191 1432 aaPredicted RBP eCLIP37.7■■■■□ 3.62
COMMD7-204ENST00000610160 SYNJ1O43426 1573 aa37.58■■■■□ 3.61
COMMD7-204ENST00000610160 DNAJC5BQ9UF47 199 aa37.54■■■■□ 3.6
COMMD7-204ENST00000610160 LAMC3Q9Y6N6 1575 aa37.45■■■■□ 3.59
COMMD7-204ENST00000610160 TOP2BQ02880 1626 aa37.44■■■■□ 3.58
COMMD7-204ENST00000610160 BIVM-ERCC5R4GMW8 1640 aa37.42■■■■□ 3.58
COMMD7-204ENST00000610160 NESP48681 1621 aa37.41■■■■□ 3.58
COMMD7-204ENST00000610160 CUX1P39880 1505 aa37.32■■■■□ 3.57
COMMD7-204ENST00000610160 FANCD2Q9BXW9 1451 aa37.32■■■■□ 3.57
COMMD7-204ENST00000610160 FAM9AQ8IZU1 332 aaPredicted RBP37.29■■■■□ 3.56
COMMD7-204ENST00000610160 SOGA1O94964 1423 aa37.19■■■■□ 3.54
COMMD7-204ENST00000610160 LOC105371045A0A1W2PR82 267 aa37.17■■■■□ 3.54
COMMD7-204ENST00000610160 EEA1Q15075 1411 aa37.15■■■■□ 3.54
COMMD7-204ENST00000610160 PDS5BQ9NTI5 1447 aa37.11■■■■□ 3.53
COMMD7-204ENST00000610160 CEP164Q9UPV0 1460 aa37.1■■■■□ 3.53
COMMD7-204ENST00000610160 RUSC2Q8N2Y8 1516 aa37.06■■■■□ 3.52
COMMD7-204ENST00000610160 KIF21AQ7Z4S6 1674 aa37.02■■■■□ 3.52
COMMD7-204ENST00000610160 DNMBPQ6XZF7 1577 aa37.02■■■■□ 3.52
COMMD7-204ENST00000610160 TOPBP1Q92547 1522 aa36.92■■■■□ 3.5
COMMD7-204ENST00000610160 FGD5Q6ZNL6 1462 aa36.91■■■■□ 3.5
COMMD7-204ENST00000610160 CSRNP3Q8WYN3 585 aa36.87■■■■□ 3.49
COMMD7-204ENST00000610160 URB2Q14146 1524 aaKnown RBP36.87■■■■□ 3.49
COMMD7-204ENST00000610160 EHMT2Q96KQ7 1210 aa36.75■■■■□ 3.47
COMMD7-204ENST00000610160 POLA1P09884 1462 aaPredicted RBP36.75■■■■□ 3.47
COMMD7-204ENST00000610160 KIF27Q86VH2 1401 aa36.74■■■■□ 3.47
COMMD7-204ENST00000610160 KIF21BO75037 1637 aa36.71■■■■□ 3.47
COMMD7-204ENST00000610160 MRC2Q9UBG0 1479 aa36.67■■■■□ 3.46
COMMD7-204ENST00000610160 CUX2O14529 1486 aa36.65■■■■□ 3.46
COMMD7-204ENST00000610160 GOLGA3Q08378 1498 aa36.64■■■■□ 3.46
COMMD7-204ENST00000610160 RAD54L2Q9Y4B4 1467 aa36.6■■■■□ 3.45
COMMD7-204ENST00000610160 ABCA10Q8WWZ4 1543 aa36.59■■■■□ 3.45
COMMD7-204ENST00000610160 ERCC6Q03468 1493 aa36.55■■■■□ 3.44
COMMD7-204ENST00000610160 WDR97A6NE52 1622 aa36.54■■■■□ 3.44
COMMD7-204ENST00000610160 WDR62O43379 1518 aa36.51■■■■□ 3.43
COMMD7-204ENST00000610160 PRXQ9BXM0 1461 aa36.5■■■■□ 3.43
COMMD7-204ENST00000610160 TNIKQ9UKE5 1360 aa36.48■■■■□ 3.43
COMMD7-204ENST00000610160 ERICH3Q5RHP9 1530 aa36.46■■■■□ 3.43
COMMD7-204ENST00000610160 RAPGEF2Q9Y4G8 1499 aa36.46■■■■□ 3.43
COMMD7-204ENST00000610160 THOC2Q8NI27 1593 aaKnown RBP36.42■■■■□ 3.42
COMMD7-204ENST00000610160 TARBP1Q13395 1621 aaKnown RBP36.4■■■■□ 3.42
COMMD7-204ENST00000610160 UBTFP17480 764 aaKnown RBP36.39■■■■□ 3.42
COMMD7-204ENST00000610160 IGF1RP08069 1367 aa36.38■■■■□ 3.41
COMMD7-204ENST00000610160 ABCA5Q8WWZ7 1642 aa36.34■■■■□ 3.41
COMMD7-204ENST00000610160 CEP162Q5TB80 1403 aa36.31■■■■□ 3.4
COMMD7-204ENST00000610160 TDRD9Q8NDG6 1382 aaKnown RBP36.22■■■■□ 3.39
COMMD7-204ENST00000610160 IFT140Q96RY7 1462 aa36.21■■■■□ 3.39
COMMD7-204ENST00000610160 CUL7Q14999 1698 aa36.21■■■■□ 3.39
COMMD7-204ENST00000610160 GAPVD1Q14C86 1478 aa36.21■■■■□ 3.39
COMMD7-204ENST00000610160 CARMIL1Q5VZK9 1371 aa36.2■■■■□ 3.39
COMMD7-204ENST00000610160 PBRM1Q86U86 1689 aa36.08■■■■□ 3.37
COMMD7-204ENST00000610160 CLIP1P30622 1438 aa36.03■■■■□ 3.36
COMMD7-204ENST00000610160 AQRO60306 1485 aaKnown RBP eCLIP36.01■■■■□ 3.369e-11■■■■■ 29.6
COMMD7-204ENST00000610160 ZNF608Q9ULD9 1512 aaPredicted RBP36.01■■■■□ 3.35
COMMD7-204ENST00000610160 EIF4G3O43432 1585 aaKnown RBP35.94■■■■□ 3.34
COMMD7-204ENST00000610160 GRIN2BQ13224 1484 aa35.93■■■■□ 3.34
COMMD7-204ENST00000610160 ADAMTS12P58397 1594 aa35.87■■■■□ 3.33
COMMD7-204ENST00000610160 CTTNBP2Q8WZ74 1663 aa35.82■■■■□ 3.32
COMMD7-204ENST00000610160 FHAD1B1AJZ9 1412 aa35.81■■■■□ 3.32
COMMD7-204ENST00000610160 RANGAP1P46060 587 aaPredicted RBP35.8■■■■□ 3.32
COMMD7-204ENST00000610160 VPS8Q8N3P4 1428 aa35.73■■■■□ 3.31
COMMD7-204ENST00000610160 SNAPC4Q5SXM2 1469 aa35.71■■■■□ 3.31
COMMD7-204ENST00000610160 ARAP1Q96P48 1450 aa35.71■■■■□ 3.31
COMMD7-204ENST00000610160 ARHGAP35Q9NRY4 1499 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms