RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
CDCA3-212ENST00000604599 TCP11L2Q8N4U5 519 aa15.61■□□□□ 0.09
CDCA3-212ENST00000604599 MSNP26038 577 aaKnown RBP15.61■□□□□ 0.09
CDCA3-212ENST00000604599 SAMD9LQ8IVG5 1584 aa15.6■□□□□ 0.09
CDCA3-212ENST00000604599 RAB3GAP1Q15042 981 aa15.6■□□□□ 0.09
CDCA3-212ENST00000604599 CARD14Q9BXL6 1004 aa15.6■□□□□ 0.09
CDCA3-212ENST00000604599 SCAF11Q99590 1463 aaKnown RBP15.6■□□□□ 0.09
CDCA3-212ENST00000604599 RIPK4P57078 832 aa15.6■□□□□ 0.09
CDCA3-212ENST00000604599 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
CDCA3-212ENST00000604599 FAM13BQ9NYF5 915 aa15.6■□□□□ 0.09
CDCA3-212ENST00000604599 MADDQ8WXG6 1647 aa15.6■□□□□ 0.09
CDCA3-212ENST00000604599 OFD1O75665 1012 aa15.59■□□□□ 0.09
CDCA3-212ENST00000604599 SMC5Q8IY18 1101 aa15.59■□□□□ 0.09
CDCA3-212ENST00000604599 ATP10BO94823 1461 aa15.59■□□□□ 0.09
CDCA3-212ENST00000604599 CALD1Q05682 793 aaKnown RBP15.59■□□□□ 0.09
CDCA3-212ENST00000604599 ARID3AQ99856 593 aa15.59■□□□□ 0.09
CDCA3-212ENST00000604599 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.09
CDCA3-212ENST00000604599 DZIP1LQ8IYY4 767 aaKnown RBP15.58■□□□□ 0.08
CDCA3-212ENST00000604599 PPP1R9BQ96SB3 815 aa15.58■□□□□ 0.08
CDCA3-212ENST00000604599 IQGAP3Q86VI3 1631 aa15.58■□□□□ 0.08
CDCA3-212ENST00000604599 ABCA8O94911 1581 aa15.58■□□□□ 0.08
CDCA3-212ENST00000604599 KDM5AP29375 1690 aaKnown RBP15.57■□□□□ 0.08
CDCA3-212ENST00000604599 RUNDC1Q96C34 613 aa15.57■□□□□ 0.08
CDCA3-212ENST00000604599 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
CDCA3-212ENST00000604599 CIZ1Q9ULV3 898 aaPredicted RBP15.57■□□□□ 0.08
CDCA3-212ENST00000604599 R3HCC1Q9Y3T6 440 aaKnown RBP15.57■□□□□ 0.08
CDCA3-212ENST00000604599 ZKSCAN2Q63HK3 967 aa15.57■□□□□ 0.08
CDCA3-212ENST00000604599 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.57■□□□□ 0.08
CDCA3-212ENST00000604599 CD2BP2O95400 341 aaKnown RBP15.57■□□□□ 0.08
CDCA3-212ENST00000604599 RBM25P49756 843 aaKnown RBP15.57■□□□□ 0.08
CDCA3-212ENST00000604599 SNX21Q969T3 373 aa15.57■□□□□ 0.08
CDCA3-212ENST00000604599 SYCP2Q9BX26 1530 aa15.56■□□□□ 0.08
CDCA3-212ENST00000604599 CEP152O94986 1710 aa15.56■□□□□ 0.08
CDCA3-212ENST00000604599 POLR3AO14802 1390 aaPredicted RBP15.56■□□□□ 0.08
CDCA3-212ENST00000604599 SSFA2P28290 1259 aa15.56■□□□□ 0.08
CDCA3-212ENST00000604599 FBLN2P98095 1184 aa15.56■□□□□ 0.08
CDCA3-212ENST00000604599 ITPRIPQ8IWB1 547 aa15.56■□□□□ 0.08
CDCA3-212ENST00000604599 PRDM4Q9UKN5 801 aa15.56■□□□□ 0.08
CDCA3-212ENST00000604599 CARMIL2Q6F5E8 1435 aa15.55■□□□□ 0.08
CDCA3-212ENST00000604599 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
CDCA3-212ENST00000604599 CDC42BPBQ9Y5S2 1711 aa15.55■□□□□ 0.08
CDCA3-212ENST00000604599 WDR63Q8IWG1 891 aa15.54■□□□□ 0.08
CDCA3-212ENST00000604599 AK9Q5TCS8 1911 aa15.54■□□□□ 0.08
CDCA3-212ENST00000604599 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
CDCA3-212ENST00000604599 SMC4Q9NTJ3 1288 aa15.54■□□□□ 0.08
CDCA3-212ENST00000604599 ATP10AO60312 1499 aa15.54■□□□□ 0.08
CDCA3-212ENST00000604599 SHPRHQ149N8 1683 aa15.53■□□□□ 0.08
CDCA3-212ENST00000604599 HDAC1Q13547 482 aaPredicted RBP15.53■□□□□ 0.08
CDCA3-212ENST00000604599 IQSEC2Q5JU85 1478 aa15.53■□□□□ 0.08
CDCA3-212ENST00000604599 TRIM27P14373 513 aa15.53■□□□□ 0.08
CDCA3-212ENST00000604599 TSR2Q969E8 191 aaKnown RBP15.53■□□□□ 0.08
CDCA3-212ENST00000604599 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
CDCA3-212ENST00000604599 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
CDCA3-212ENST00000604599 PHF23Q9BUL5 403 aaPredicted RBP15.53■□□□□ 0.08
CDCA3-212ENST00000604599 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
CDCA3-212ENST00000604599 GOLGA6L22H0YM25 854 aa15.52■□□□□ 0.08
CDCA3-212ENST00000604599 PTMSP20962 102 aa15.52■□□□□ 0.08
CDCA3-212ENST00000604599 XPCQ01831 940 aaPredicted RBP15.52■□□□□ 0.08
CDCA3-212ENST00000604599 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.08
CDCA3-212ENST00000604599 CHMP7Q8WUX9 453 aaPredicted RBP15.52■□□□□ 0.08
CDCA3-212ENST00000604599 MORC1Q86VD1 984 aa15.52■□□□□ 0.07
CDCA3-212ENST00000604599 KIF2CQ99661 725 aa15.51■□□□□ 0.07
CDCA3-212ENST00000604599 MAST1Q9Y2H9 1570 aa15.51■□□□□ 0.07
CDCA3-212ENST00000604599 NCLP19338 710 aaKnown RBP15.5■□□□□ 0.07
CDCA3-212ENST00000604599 KLHL40Q2TBA0 621 aa15.5■□□□□ 0.07
CDCA3-212ENST00000604599 GAS2L2Q8NHY3 880 aa15.5■□□□□ 0.07
CDCA3-212ENST00000604599 ERVK-7P63135 1459 aa15.5■□□□□ 0.07
CDCA3-212ENST00000604599 UQCRHLA0A096LP55 91 aa15.5■□□□□ 0.07
CDCA3-212ENST00000604599 K7ELQ4 463 aaPredicted RBP15.5■□□□□ 0.07
CDCA3-212ENST00000604599 UQCRHP07919 91 aa15.5■□□□□ 0.07
CDCA3-212ENST00000604599 PREX2Q70Z35 1606 aa15.5■□□□□ 0.07
CDCA3-212ENST00000604599 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
CDCA3-212ENST00000604599 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
CDCA3-212ENST00000604599 PLEKHG5O94827 1062 aa15.49■□□□□ 0.07
CDCA3-212ENST00000604599 TTC37Q6PGP7 1564 aa15.49■□□□□ 0.07
CDCA3-212ENST00000604599 SPHKAPQ2M3C7 1700 aa15.49■□□□□ 0.07
CDCA3-212ENST00000604599 BAG4O95429 457 aaKnown RBP15.49■□□□□ 0.07
CDCA3-212ENST00000604599 TERF1P54274 439 aa15.48■□□□□ 0.07
CDCA3-212ENST00000604599 CAVIN1Q6NZI2 390 aaKnown RBP15.48■□□□□ 0.07
CDCA3-212ENST00000604599 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 EXOSC9Q06265 439 aaKnown RBP15.47■□□□□ 0.07
CDCA3-212ENST00000604599 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 CFAP70Q5T0N1 1121 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 ARHGAP5Q13017 1502 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 MTHFSP49914 203 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 ATF7IPQ6VMQ6 1270 aa15.47■□□□□ 0.07
CDCA3-212ENST00000604599 IBTKQ9P2D0 1353 aaPredicted RBP15.46■□□□□ 0.07
CDCA3-212ENST00000604599 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.07
CDCA3-212ENST00000604599 NUCB1Q02818 461 aa15.46■□□□□ 0.07
CDCA3-212ENST00000604599 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.46■□□□□ 0.06
CDCA3-212ENST00000604599 NOL7Q9UMY1 257 aaKnown RBP15.46■□□□□ 0.06
CDCA3-212ENST00000604599 CCDC27Q2M243 656 aa15.45■□□□□ 0.06
CDCA3-212ENST00000604599 ZSCAN23Q3MJ62 389 aa15.45■□□□□ 0.06
CDCA3-212ENST00000604599 RBSNQ9H1K0 784 aa15.45■□□□□ 0.06
CDCA3-212ENST00000604599 PRDM10Q9NQV6 1147 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms