RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 PANK3Q9H999 370 aa32.14■■■□□ 2.74
SYMPK-212ENST00000598896 NCKAP5LQ9HCH0 1330 aa32.13■■■□□ 2.73
SYMPK-212ENST00000598896 AMOTL2Q9Y2J4 779 aa32.12■■■□□ 2.73
SYMPK-212ENST00000598896 LMTK3Q96Q04 1460 aa32.11■■■□□ 2.73
SYMPK-212ENST00000598896 PER1O15534 1290 aaPredicted RBP32.11■■■□□ 2.73
SYMPK-212ENST00000598896 PIK3R4Q99570 1358 aa32.11■■■□□ 2.73
SYMPK-212ENST00000598896 CABP2Q9NPB3 220 aa32.09■■■□□ 2.73
SYMPK-212ENST00000598896 PTCH1Q13635 1447 aa32.09■■■□□ 2.73
SYMPK-212ENST00000598896 PUS7Q96PZ0 661 aaKnown RBP32.08■■■□□ 2.73
SYMPK-212ENST00000598896 PRKRIP1Q9H875 184 aaPredicted RBP32.08■■■□□ 2.73
SYMPK-212ENST00000598896 HSPA2P54652 639 aa32.07■■■□□ 2.72
SYMPK-212ENST00000598896 CHD2O14647 1828 aaKnown RBP32.07■■■□□ 2.72
SYMPK-212ENST00000598896 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.06■■■□□ 2.72
SYMPK-212ENST00000598896 SRPK2P78362 688 aaKnown RBP32.04■■■□□ 2.72
SYMPK-212ENST00000598896 CDK19Q9BWU1 502 aa32.03■■■□□ 2.72
SYMPK-212ENST00000598896 KCNA6P17658 529 aa32.02■■■□□ 2.72
SYMPK-212ENST00000598896 ADGRB2O60241 1585 aa32.01■■■□□ 2.71
SYMPK-212ENST00000598896 CNGB1Q14028 1251 aaPredicted RBP32.01■■■□□ 2.71
SYMPK-212ENST00000598896 SLC12A5Q9H2X9 1139 aa32.01■■■□□ 2.71
SYMPK-212ENST00000598896 TMC1Q8TDI8 760 aa31.99■■■□□ 2.71
SYMPK-212ENST00000598896 ATAD2Q6PL18 1390 aa31.99■■■□□ 2.71
SYMPK-212ENST00000598896 CCER2I3L3R5 266 aa31.97■■■□□ 2.71
SYMPK-212ENST00000598896 WASLO00401 505 aaPredicted RBP31.97■■■□□ 2.71
SYMPK-212ENST00000598896 CARD14Q9BXL6 1004 aa31.95■■■□□ 2.7
SYMPK-212ENST00000598896 STRCQ7RTU9 1775 aa31.93■■■□□ 2.7
SYMPK-212ENST00000598896 NINLQ9Y2I6 1382 aa31.92■■■□□ 2.7
SYMPK-212ENST00000598896 NWD1Q149M9 1564 aa31.92■■■□□ 2.7
SYMPK-212ENST00000598896 KNSTRNQ9Y448 316 aa31.91■■■□□ 2.7
SYMPK-212ENST00000598896 ANKRD36BQ8N2N9 1353 aa31.9■■■□□ 2.7
SYMPK-212ENST00000598896 AMER1Q5JTC6 1135 aaPredicted RBP31.9■■■□□ 2.7
SYMPK-212ENST00000598896 KTN1Q86UP2 1357 aaKnown RBP31.89■■■□□ 2.7
SYMPK-212ENST00000598896 PARD3Q8TEW0 1356 aa31.89■■■□□ 2.7
SYMPK-212ENST00000598896 CC2D1BQ5T0F9 858 aaKnown RBP31.89■■■□□ 2.69
SYMPK-212ENST00000598896 CD163L1Q9NR16 1453 aa31.88■■■□□ 2.69
SYMPK-212ENST00000598896 ATP7BP35670 1465 aa31.87■■■□□ 2.69
SYMPK-212ENST00000598896 NSD3Q9BZ95 1437 aa31.86■■■□□ 2.69
SYMPK-212ENST00000598896 A0A1W2PP64 1363 aa31.86■■■□□ 2.69
SYMPK-212ENST00000598896 CCDC184Q52MB2 194 aa31.85■■■□□ 2.69
SYMPK-212ENST00000598896 NALCNQ8IZF0 1738 aa31.85■■■□□ 2.69
SYMPK-212ENST00000598896 PRR36Q9H6K5 1346 aa31.84■■■□□ 2.69
SYMPK-212ENST00000598896 RALBP1Q15311 655 aa31.84■■■□□ 2.69
SYMPK-212ENST00000598896 CABP1Q9NZU7 370 aa31.84■■■□□ 2.69
SYMPK-212ENST00000598896 NUDT16Q96DE0 195 aaKnown RBP31.82■■■□□ 2.69
SYMPK-212ENST00000598896 NPC1L1Q9UHC9 1359 aa31.82■■■□□ 2.68
SYMPK-212ENST00000598896 USP32Q8NFA0 1604 aa31.81■■■□□ 2.68
SYMPK-212ENST00000598896 PPIP5K1Q6PFW1 1433 aa31.81■■■□□ 2.68
SYMPK-212ENST00000598896 RBM33Q96EV2 1170 aaKnown RBP31.81■■■□□ 2.68
SYMPK-212ENST00000598896 TOPAZ1Q8N9V7 1692 aa31.8■■■□□ 2.68
SYMPK-212ENST00000598896 STRCP1A6NGW2 1772 aa31.8■■■□□ 2.68
SYMPK-212ENST00000598896 YTHDC1Q96MU7 727 aaKnown RBP31.78■■■□□ 2.68
SYMPK-212ENST00000598896 CCDC61Q9Y6R9 512 aa31.78■■■□□ 2.68
SYMPK-212ENST00000598896 MYBBP1AQ9BQG0 1328 aaKnown RBP31.77■■■□□ 2.68
SYMPK-212ENST00000598896 NKTRP30414 1462 aaKnown RBP31.76■■■□□ 2.68
SYMPK-212ENST00000598896 TERF2IPQ9NYB0 399 aa31.76■■■□□ 2.68
SYMPK-212ENST00000598896 NUTM2FA1L443 756 aa31.76■■■□□ 2.67
SYMPK-212ENST00000598896 CDC42BPGQ6DT37 1551 aa31.75■■■□□ 2.67
SYMPK-212ENST00000598896 FMN2Q9NZ56 1722 aa31.74■■■□□ 2.67
SYMPK-212ENST00000598896 ADGRL3Q9HAR2 1447 aa31.74■■■□□ 2.67
SYMPK-212ENST00000598896 MRS2Q9HD23 443 aa31.74■■■□□ 2.67
SYMPK-212ENST00000598896 RGPD8O14715 1765 aaPredicted RBP31.73■■■□□ 2.67
SYMPK-212ENST00000598896 CPSF1Q10570 1443 aaKnown RBP31.72■■■□□ 2.67
SYMPK-212ENST00000598896 HDGFL2Q7Z4V5 671 aaPredicted RBP31.72■■■□□ 2.67
SYMPK-212ENST00000598896 CGNL1Q0VF96 1302 aa31.7■■■□□ 2.66
SYMPK-212ENST00000598896 AKAP12Q02952 1782 aa31.7■■■□□ 2.66
SYMPK-212ENST00000598896 ITSN1Q15811 1721 aa31.69■■■□□ 2.66
SYMPK-212ENST00000598896 MON2Q7Z3U7 1717 aa31.67■■■□□ 2.66
SYMPK-212ENST00000598896 PROSER2Q86WR7 435 aaPredicted RBP31.67■■■□□ 2.66
SYMPK-212ENST00000598896 ANKARQ7Z5J8 1434 aa31.66■■■□□ 2.66
SYMPK-212ENST00000598896 NLRP13Q86W25 1043 aa31.66■■■□□ 2.66
SYMPK-212ENST00000598896 BRD4O60885 1362 aaPredicted RBP31.65■■■□□ 2.66
SYMPK-212ENST00000598896 PLEKHG3A1L390 1219 aa31.63■■■□□ 2.65
SYMPK-212ENST00000598896 NSD2O96028 1365 aa31.62■■■□□ 2.65
SYMPK-212ENST00000598896 PPP2R1AP30153 589 aa31.62■■■□□ 2.65
SYMPK-212ENST00000598896 KIF20BQ96Q89 1820 aa31.62■■■□□ 2.65
SYMPK-212ENST00000598896 C14orf37Q86TY3 774 aa31.61■■■□□ 2.65
SYMPK-212ENST00000598896 EDC4Q6P2E9 1401 aaKnown RBP31.61■■■□□ 2.65
SYMPK-212ENST00000598896 ACEP12821 1306 aa31.6■■■□□ 2.65
SYMPK-212ENST00000598896 ANKRD26Q9UPS8 1709 aa31.6■■■□□ 2.65
SYMPK-212ENST00000598896 TMEM94Q12767 1356 aa31.6■■■□□ 2.65
SYMPK-212ENST00000598896 NRKQ7Z2Y5 1582 aa31.59■■■□□ 2.65
SYMPK-212ENST00000598896 FYB1O15117 783 aa31.59■■■□□ 2.65
SYMPK-212ENST00000598896 MORC1Q86VD1 984 aa31.57■■■□□ 2.64
SYMPK-212ENST00000598896 PMFBP1Q8TBY8 1022 aa31.57■■■□□ 2.64
SYMPK-212ENST00000598896 ZNF335Q9H4Z2 1342 aaPredicted RBP31.57■■■□□ 2.64
SYMPK-212ENST00000598896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.56■■■□□ 2.64
SYMPK-212ENST00000598896 GGNBP2Q9H3C7 697 aa31.56■■■□□ 2.64
SYMPK-212ENST00000598896 POLR3AO14802 1390 aaPredicted RBP31.55■■■□□ 2.64
SYMPK-212ENST00000598896 ZNF692Q9BU19 519 aaPredicted RBP31.55■■■□□ 2.64
SYMPK-212ENST00000598896 FAM9BQ8IZU0 186 aa31.55■■■□□ 2.64
SYMPK-212ENST00000598896 XIRP1Q702N8 1843 aaKnown RBP31.54■■■□□ 2.64
SYMPK-212ENST00000598896 USP6P35125 1406 aa31.53■■■□□ 2.64
SYMPK-212ENST00000598896 NCOA3Q9Y6Q9 1424 aa31.53■■■□□ 2.64
SYMPK-212ENST00000598896 PNISRQ8TF01 805 aaKnown RBP31.52■■■□□ 2.64
SYMPK-212ENST00000598896 C19orf44Q9H6X5 657 aa31.52■■■□□ 2.64
SYMPK-212ENST00000598896 TNNT2P45379 298 aaPredicted RBP31.51■■■□□ 2.63
SYMPK-212ENST00000598896 SSH2Q76I76 1423 aa31.49■■■□□ 2.63
SYMPK-212ENST00000598896 LRRC7Q96NW7 1537 aa31.48■■■□□ 2.63
SYMPK-212ENST00000598896 NME9Q86XW9 330 aa31.48■■■□□ 2.63
SYMPK-212ENST00000598896 NGDNQ8NEJ9 315 aaKnown RBP31.48■■■□□ 2.63
SYMPK-212ENST00000598896 DMRT2Q9Y5R5 561 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms