RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ATRNO75882 1429 aa19.78■□□□□ 0.76
H3F3B-213ENST00000593254 PTCH1Q13635 1447 aa19.78■□□□□ 0.76
H3F3B-213ENST00000593254 ZNF326Q5BKZ1 582 aaKnown RBP19.78■□□□□ 0.76
H3F3B-213ENST00000593254 COL22A1Q8NFW1 1626 aaPredicted RBP19.77■□□□□ 0.76
H3F3B-213ENST00000593254 ORAI2Q96SN7 254 aa19.75■□□□□ 0.75
H3F3B-213ENST00000593254 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
H3F3B-213ENST00000593254 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
H3F3B-213ENST00000593254 MYOM2P54296 1465 aa19.73■□□□□ 0.75
H3F3B-213ENST00000593254 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
H3F3B-213ENST00000593254 PPLO60437 1756 aa19.72■□□□□ 0.75
H3F3B-213ENST00000593254 MARF1Q9Y4F3 1742 aaKnown RBP19.71■□□□□ 0.75
H3F3B-213ENST00000593254 CCDC125Q86Z20 511 aa19.71■□□□□ 0.75
H3F3B-213ENST00000593254 BCL9LQ86UU0 1499 aa19.71■□□□□ 0.75
H3F3B-213ENST00000593254 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
H3F3B-213ENST00000593254 RPGRIP1LQ68CZ1 1315 aa19.68■□□□□ 0.74
H3F3B-213ENST00000593254 ACIN1Q9UKV3 1341 aaKnown RBP19.67■□□□□ 0.74
H3F3B-213ENST00000593254 CCDC144AA2RUR9 1427 aa19.67■□□□□ 0.74
H3F3B-213ENST00000593254 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
H3F3B-213ENST00000593254 PXDNQ92626 1479 aa19.66■□□□□ 0.74
H3F3B-213ENST00000593254 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.65■□□□□ 0.74
H3F3B-213ENST00000593254 NPHP3Q7Z494 1330 aa19.64■□□□□ 0.73
H3F3B-213ENST00000593254 IFT172Q9UG01 1749 aa19.63■□□□□ 0.73
H3F3B-213ENST00000593254 CDC42BPGQ6DT37 1551 aa19.63■□□□□ 0.73
H3F3B-213ENST00000593254 SPATA31E1Q6ZUB1 1445 aa19.63■□□□□ 0.73
H3F3B-213ENST00000593254 GJD4Q96KN9 370 aaPredicted RBP19.63■□□□□ 0.73
H3F3B-213ENST00000593254 RAB3GAP2Q9H2M9 1393 aa19.61■□□□□ 0.73
H3F3B-213ENST00000593254 GLI3P10071 1580 aa19.6■□□□□ 0.73
H3F3B-213ENST00000593254 BLMP54132 1417 aaPredicted RBP19.59■□□□□ 0.73
H3F3B-213ENST00000593254 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
H3F3B-213ENST00000593254 SLIT2O94813 1529 aa19.59■□□□□ 0.73
H3F3B-213ENST00000593254 BRWD3Q6RI45 1802 aa19.58■□□□□ 0.73
H3F3B-213ENST00000593254 RALGAPBQ86X10 1494 aa19.58■□□□□ 0.72
H3F3B-213ENST00000593254 FOXO3O43524 673 aa19.57■□□□□ 0.72
H3F3B-213ENST00000593254 UNC5CLQ8IV45 518 aa19.56■□□□□ 0.72
H3F3B-213ENST00000593254 ANKRD30BQ9BXX2 1392 aa19.56■□□□□ 0.72
H3F3B-213ENST00000593254 XPCQ01831 940 aaPredicted RBP19.55■□□□□ 0.72
H3F3B-213ENST00000593254 RGL3Q3MIN7 710 aa19.55■□□□□ 0.72
H3F3B-213ENST00000593254 LRPPRCP42704 1394 aaKnown RBP19.55■□□□□ 0.72
H3F3B-213ENST00000593254 ADGRF5Q8IZF2 1346 aa19.54■□□□□ 0.72
H3F3B-213ENST00000593254 LRP5O75197 1615 aa19.54■□□□□ 0.72
H3F3B-213ENST00000593254 TECPR2O15040 1411 aa19.52■□□□□ 0.72
H3F3B-213ENST00000593254 USP32Q8NFA0 1604 aa19.52■□□□□ 0.72
H3F3B-213ENST00000593254 DEFB132Q7Z7B7 95 aa19.52■□□□□ 0.72
H3F3B-213ENST00000593254 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
H3F3B-213ENST00000593254 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
H3F3B-213ENST00000593254 KIF1AQ12756 1690 aa19.49■□□□□ 0.71
H3F3B-213ENST00000593254 KNDC1Q76NI1 1749 aa19.48■□□□□ 0.71
H3F3B-213ENST00000593254 FMN2Q9NZ56 1722 aa19.48■□□□□ 0.71
H3F3B-213ENST00000593254 HRCP23327 699 aa19.48■□□□□ 0.71
H3F3B-213ENST00000593254 NUTM2FA1L443 756 aa19.47■□□□□ 0.71
H3F3B-213ENST00000593254 ONECUT3O60422 494 aaPredicted RBP19.47■□□□□ 0.71
H3F3B-213ENST00000593254 WAPLQ7Z5K2 1190 aa19.47■□□□□ 0.71
H3F3B-213ENST00000593254 SEPT12Q8IYM1 358 aa19.47■□□□□ 0.71
H3F3B-213ENST00000593254 NWD2Q9ULI1 1742 aa19.47■□□□□ 0.71
H3F3B-213ENST00000593254 NRXN1Q9ULB1 1477 aa19.47■□□□□ 0.71
H3F3B-213ENST00000593254 VPS72Q15906 364 aa19.46■□□□□ 0.71
H3F3B-213ENST00000593254 ABCC11Q96J66 1382 aa19.45■□□□□ 0.7
H3F3B-213ENST00000593254 SF3B2Q13435 895 aaKnown RBP19.45■□□□□ 0.7
H3F3B-213ENST00000593254 PLCH1Q4KWH8 1693 aa19.45■□□□□ 0.7
H3F3B-213ENST00000593254 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
H3F3B-213ENST00000593254 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
H3F3B-213ENST00000593254 RGPD8O14715 1765 aaPredicted RBP19.42■□□□□ 0.7
H3F3B-213ENST00000593254 KRT28Q7Z3Y7 464 aa19.42■□□□□ 0.7
H3F3B-213ENST00000593254 STK26Q9P289 416 aa19.42■□□□□ 0.7
H3F3B-213ENST00000593254 TNS3Q68CZ2 1445 aa19.42■□□□□ 0.7
H3F3B-213ENST00000593254 TMEM132EQ6IEE7 984 aa19.41■□□□□ 0.7
H3F3B-213ENST00000593254 KRT27Q7Z3Y8 459 aa19.41■□□□□ 0.7
H3F3B-213ENST00000593254 YTHDC2Q9H6S0 1430 aaKnown RBP19.41■□□□□ 0.7
H3F3B-213ENST00000593254 C14orf93Q9H972 538 aaKnown RBP19.4■□□□□ 0.7
H3F3B-213ENST00000593254 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
H3F3B-213ENST00000593254 SBNO1A3KN83 1393 aa19.37■□□□□ 0.69
H3F3B-213ENST00000593254 NRAPQ86VF7 1730 aa19.37■□□□□ 0.69
H3F3B-213ENST00000593254 PSDA5PKW4 1024 aaPredicted RBP19.36■□□□□ 0.69
H3F3B-213ENST00000593254 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
H3F3B-213ENST00000593254 SIRT1Q96EB6 747 aa19.36■□□□□ 0.69
H3F3B-213ENST00000593254 PHF8Q9UPP1 1060 aa19.36■□□□□ 0.69
H3F3B-213ENST00000593254 BAG6P46379 1132 aa19.35■□□□□ 0.69
H3F3B-213ENST00000593254 HAP1P54257 671 aaPredicted RBP19.35■□□□□ 0.69
H3F3B-213ENST00000593254 PSME1Q06323 249 aa19.35■□□□□ 0.69
H3F3B-213ENST00000593254 ARHGEF10O15013 1369 aa19.34■□□□□ 0.69
H3F3B-213ENST00000593254 FAM83GA6ND36 823 aa19.34■□□□□ 0.69
H3F3B-213ENST00000593254 CCDC9Q9Y3X0 531 aaKnown RBP19.34■□□□□ 0.69
H3F3B-213ENST00000593254 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
H3F3B-213ENST00000593254 RGPD1P0DJD0 1748 aa19.33■□□□□ 0.68
H3F3B-213ENST00000593254 ADGRB1O14514 1584 aa19.32■□□□□ 0.68
H3F3B-213ENST00000593254 DLC1Q96QB1 1528 aa19.31■□□□□ 0.68
H3F3B-213ENST00000593254 FAM98CQ17RN3 349 aaKnown RBP19.3■□□□□ 0.68
H3F3B-213ENST00000593254 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
H3F3B-213ENST00000593254 TRPM3Q9HCF6 1732 aaPredicted RBP19.29■□□□□ 0.68
H3F3B-213ENST00000593254 DISP2A7MBM2 1401 aa19.29■□□□□ 0.68
H3F3B-213ENST00000593254 DCAF11Q8TEB1 546 aa19.29■□□□□ 0.68
H3F3B-213ENST00000593254 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
H3F3B-213ENST00000593254 EN1Q05925 392 aaPredicted RBP19.28■□□□□ 0.68
H3F3B-213ENST00000593254 COL14A1Q05707 1796 aaKnown RBP19.28■□□□□ 0.68
H3F3B-213ENST00000593254 TNS1Q9HBL0 1735 aaKnown RBP19.28■□□□□ 0.68
H3F3B-213ENST00000593254 LMOD2Q6P5Q4 547 aa19.27■□□□□ 0.68
H3F3B-213ENST00000593254 BTG4Q9NY30 223 aa19.27■□□□□ 0.68
H3F3B-213ENST00000593254 KDM2AQ9Y2K7 1162 aa19.27■□□□□ 0.68
H3F3B-213ENST00000593254 ALS2Q96Q42 1657 aa19.27■□□□□ 0.67
H3F3B-213ENST00000593254 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms