RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 NUP155O75694 1391 aa15.63■□□□□ 0.09
SDF2-209ENST00000591903 GJD4Q96KN9 370 aaPredicted RBP15.63■□□□□ 0.09
SDF2-209ENST00000591903 PRAG1Q86YV5 1406 aa15.62■□□□□ 0.09
SDF2-209ENST00000591903 ORAI2Q96SN7 254 aa15.62■□□□□ 0.09
SDF2-209ENST00000591903 BRWD3Q6RI45 1802 aa15.61■□□□□ 0.09
SDF2-209ENST00000591903 NPHP3Q7Z494 1330 aa15.61■□□□□ 0.09
SDF2-209ENST00000591903 SF3B2Q13435 895 aaKnown RBP15.6■□□□□ 0.09
SDF2-209ENST00000591903 HFM1A2PYH4 1435 aa15.59■□□□□ 0.09
SDF2-209ENST00000591903 PXDNQ92626 1479 aa15.59■□□□□ 0.09
SDF2-209ENST00000591903 GLI3P10071 1580 aa15.58■□□□□ 0.09
SDF2-209ENST00000591903 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.08
SDF2-209ENST00000591903 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
SDF2-209ENST00000591903 LRPPRCP42704 1394 aaKnown RBP15.57■□□□□ 0.08
SDF2-209ENST00000591903 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
SDF2-209ENST00000591903 RALGAPBQ86X10 1494 aa15.57■□□□□ 0.08
SDF2-209ENST00000591903 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
SDF2-209ENST00000591903 SLIT2O94813 1529 aa15.55■□□□□ 0.08
SDF2-209ENST00000591903 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
SDF2-209ENST00000591903 ESCO1Q5FWF5 840 aa15.54■□□□□ 0.08
SDF2-209ENST00000591903 DEFB132Q7Z7B7 95 aa15.53■□□□□ 0.08
SDF2-209ENST00000591903 NWD2Q9ULI1 1742 aa15.53■□□□□ 0.08
SDF2-209ENST00000591903 USP32Q8NFA0 1604 aa15.53■□□□□ 0.08
SDF2-209ENST00000591903 KIF1AQ12756 1690 aa15.51■□□□□ 0.07
SDF2-209ENST00000591903 FOXO3O43524 673 aa15.5■□□□□ 0.07
SDF2-209ENST00000591903 PPLO60437 1756 aa15.49■□□□□ 0.07
SDF2-209ENST00000591903 PLCH1Q4KWH8 1693 aa15.49■□□□□ 0.07
SDF2-209ENST00000591903 BAG6P46379 1132 aa15.48■□□□□ 0.07
SDF2-209ENST00000591903 SEPT12Q8IYM1 358 aa15.48■□□□□ 0.07
SDF2-209ENST00000591903 RPGRIP1LQ68CZ1 1315 aa15.47■□□□□ 0.07
SDF2-209ENST00000591903 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
SDF2-209ENST00000591903 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
SDF2-209ENST00000591903 RGPD1P0DJD0 1748 aa15.47■□□□□ 0.07
SDF2-209ENST00000591903 HRCP23327 699 aa15.47■□□□□ 0.07
SDF2-209ENST00000591903 VPS72Q15906 364 aa15.47■□□□□ 0.07
SDF2-209ENST00000591903 KRT27Q7Z3Y8 459 aa15.47■□□□□ 0.07
SDF2-209ENST00000591903 SPATA31A3Q5VYP0 1347 aa15.46■□□□□ 0.07
SDF2-209ENST00000591903 XPCQ01831 940 aaPredicted RBP15.46■□□□□ 0.07
SDF2-209ENST00000591903 NAIPQ13075 1403 aa15.45■□□□□ 0.06
SDF2-209ENST00000591903 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
SDF2-209ENST00000591903 KNDC1Q76NI1 1749 aa15.44■□□□□ 0.06
SDF2-209ENST00000591903 ABCA3Q99758 1704 aa15.43■□□□□ 0.06
SDF2-209ENST00000591903 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
SDF2-209ENST00000591903 HAP1P54257 671 aaPredicted RBP15.43■□□□□ 0.06
SDF2-209ENST00000591903 TECPR2O15040 1411 aa15.42■□□□□ 0.06
SDF2-209ENST00000591903 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
SDF2-209ENST00000591903 TNS3Q68CZ2 1445 aa15.41■□□□□ 0.06
SDF2-209ENST00000591903 IFT172Q9UG01 1749 aa15.4■□□□□ 0.06
SDF2-209ENST00000591903 RGPD8O14715 1765 aaPredicted RBP15.39■□□□□ 0.05
SDF2-209ENST00000591903 ITGAEP38570 1179 aa15.39■□□□□ 0.05
SDF2-209ENST00000591903 PSME1Q06323 249 aa15.39■□□□□ 0.05
SDF2-209ENST00000591903 KRT28Q7Z3Y7 464 aa15.39■□□□□ 0.05
SDF2-209ENST00000591903 NRAPQ86VF7 1730 aa15.39■□□□□ 0.05
SDF2-209ENST00000591903 DISP2A7MBM2 1401 aa15.38■□□□□ 0.05
SDF2-209ENST00000591903 NUTM2FA1L443 756 aa15.38■□□□□ 0.05
SDF2-209ENST00000591903 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
SDF2-209ENST00000591903 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
SDF2-209ENST00000591903 A0A0G2JS52 829 aa15.37■□□□□ 0.05
SDF2-209ENST00000591903 MYT1Q01538 1121 aa15.37■□□□□ 0.05
SDF2-209ENST00000591903 ADGRB2O60241 1585 aa15.36■□□□□ 0.05
SDF2-209ENST00000591903 SBNO1A3KN83 1393 aa15.36■□□□□ 0.05
SDF2-209ENST00000591903 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
SDF2-209ENST00000591903 EN1Q05925 392 aaPredicted RBP15.35■□□□□ 0.05
SDF2-209ENST00000591903 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
SDF2-209ENST00000591903 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
SDF2-209ENST00000591903 R3HDM1Q15032 1099 aaKnown RBP15.34■□□□□ 0.05
SDF2-209ENST00000591903 WAPLQ7Z5K2 1190 aa15.34■□□□□ 0.05
SDF2-209ENST00000591903 YY1P25490 414 aa15.33■□□□□ 0.04
SDF2-209ENST00000591903 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
SDF2-209ENST00000591903 CABLES1Q8TDN4 633 aa15.33■□□□□ 0.04
SDF2-209ENST00000591903 STK26Q9P289 416 aa15.33■□□□□ 0.04
SDF2-209ENST00000591903 NRXN1Q9ULB1 1477 aa15.33■□□□□ 0.04
SDF2-209ENST00000591903 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
SDF2-209ENST00000591903 THSD7AQ9UPZ6 1657 aa15.32■□□□□ 0.04
SDF2-209ENST00000591903 FAM83GA6ND36 823 aa15.31■□□□□ 0.04
SDF2-209ENST00000591903 PARD3Q8TEW0 1356 aa15.31■□□□□ 0.04
SDF2-209ENST00000591903 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
SDF2-209ENST00000591903 SIRT1Q96EB6 747 aa15.3■□□□□ 0.04
SDF2-209ENST00000591903 ANKRD30BQ9BXX2 1392 aa15.3■□□□□ 0.04
SDF2-209ENST00000591903 YTHDC2Q9H6S0 1430 aaKnown RBP15.29■□□□□ 0.04
SDF2-209ENST00000591903 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
SDF2-209ENST00000591903 LMOD2Q6P5Q4 547 aa15.29■□□□□ 0.04
SDF2-209ENST00000591903 RREB1Q92766 1687 aa15.28■□□□□ 0.04
SDF2-209ENST00000591903 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
SDF2-209ENST00000591903 TRPM3Q9HCF6 1732 aaPredicted RBP15.28■□□□□ 0.04
SDF2-209ENST00000591903 ALS2Q96Q42 1657 aa15.28■□□□□ 0.04
SDF2-209ENST00000591903 PIK3C2GO75747 1445 aa15.27■□□□□ 0.04
SDF2-209ENST00000591903 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
SDF2-209ENST00000591903 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
SDF2-209ENST00000591903 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
SDF2-209ENST00000591903 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
SDF2-209ENST00000591903 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
SDF2-209ENST00000591903 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
SDF2-209ENST00000591903 ANKARQ7Z5J8 1434 aa15.26■□□□□ 0.03
SDF2-209ENST00000591903 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
SDF2-209ENST00000591903 CAMKK2Q96RR4 588 aa15.25■□□□□ 0.03
SDF2-209ENST00000591903 NUP188Q5SRE5 1749 aa15.25■□□□□ 0.03
SDF2-209ENST00000591903 CRYBG1Q9Y4K1 1723 aa15.25■□□□□ 0.03
SDF2-209ENST00000591903 FAM196AQ6ZSG2 479 aa15.24■□□□□ 0.03
SDF2-209ENST00000591903 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
SDF2-209ENST00000591903 SPATA31E1Q6ZUB1 1445 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms