RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
DNMT1-224ENST00000591764 SYNMO15061 1565 aa13.01□□□□□ -0.33
DNMT1-224ENST00000591764 VWDEQ8N2E2 1590 aa13.01□□□□□ -0.33
DNMT1-224ENST00000591764 EIF2AK4Q9P2K8 1649 aaKnown RBP13.01□□□□□ -0.33
DNMT1-224ENST00000591764 RGL2O15211 777 aa13□□□□□ -0.33
DNMT1-224ENST00000591764 MAST1Q9Y2H9 1570 aa12.99□□□□□ -0.33
DNMT1-224ENST00000591764 ABCC3O15438 1527 aa12.99□□□□□ -0.33
DNMT1-224ENST00000591764 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
DNMT1-224ENST00000591764 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
DNMT1-224ENST00000591764 STK24Q9Y6E0 443 aa12.99□□□□□ -0.33
DNMT1-224ENST00000591764 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
DNMT1-224ENST00000591764 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.34
DNMT1-224ENST00000591764 STK25O00506 426 aa12.95□□□□□ -0.34
DNMT1-224ENST00000591764 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
DNMT1-224ENST00000591764 DUOX2Q9NRD8 1548 aa12.94□□□□□ -0.34
DNMT1-224ENST00000591764 SCAF11Q99590 1463 aaKnown RBP12.94□□□□□ -0.34
DNMT1-224ENST00000591764 EMP3P54852 163 aa12.94□□□□□ -0.34
DNMT1-224ENST00000591764 TAOK2Q9UL54 1235 aa12.94□□□□□ -0.34
DNMT1-224ENST00000591764 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
DNMT1-224ENST00000591764 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
DNMT1-224ENST00000591764 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
DNMT1-224ENST00000591764 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
DNMT1-224ENST00000591764 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
DNMT1-224ENST00000591764 MFRPQ9BY79 579 aa12.93□□□□□ -0.34
DNMT1-224ENST00000591764 CEP152O94986 1710 aa12.93□□□□□ -0.34
DNMT1-224ENST00000591764 UBR1Q8IWV7 1749 aa12.93□□□□□ -0.34
DNMT1-224ENST00000591764 NLRP6P59044 892 aa12.92□□□□□ -0.34
DNMT1-224ENST00000591764 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
DNMT1-224ENST00000591764 MAP3K1Q13233 1512 aa12.92□□□□□ -0.34
DNMT1-224ENST00000591764 CFAP65Q6ZU64 1925 aaKnown RBP12.91□□□□□ -0.34
DNMT1-224ENST00000591764 MROH1Q8NDA8 1641 aa12.91□□□□□ -0.34
DNMT1-224ENST00000591764 ERBINQ96RT1 1412 aa12.9□□□□□ -0.34
DNMT1-224ENST00000591764 STRCP1A6NGW2 1772 aa12.9□□□□□ -0.34
DNMT1-224ENST00000591764 PRDM15P57071 1507 aaPredicted RBP12.9□□□□□ -0.34
DNMT1-224ENST00000591764 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
DNMT1-224ENST00000591764 ARHGAP31Q2M1Z3 1444 aa12.89□□□□□ -0.35
DNMT1-224ENST00000591764 SLIT1O75093 1534 aa12.89□□□□□ -0.35
DNMT1-224ENST00000591764 KANK1Q14678 1352 aa12.89□□□□□ -0.35
DNMT1-224ENST00000591764 KIF15Q9NS87 1388 aa12.89□□□□□ -0.35
DNMT1-224ENST00000591764 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
DNMT1-224ENST00000591764 TXNDC2Q86VQ3 553 aa12.88□□□□□ -0.35
DNMT1-224ENST00000591764 ARHGAP23Q9P227 1491 aa12.88□□□□□ -0.35
DNMT1-224ENST00000591764 CROCC2H7BZ55 1655 aa12.87□□□□□ -0.35
DNMT1-224ENST00000591764 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
DNMT1-224ENST00000591764 KDM5AP29375 1690 aaKnown RBP12.86□□□□□ -0.35
DNMT1-224ENST00000591764 DOK7Q18PE1 504 aa12.85□□□□□ -0.35
DNMT1-224ENST00000591764 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
DNMT1-224ENST00000591764 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
DNMT1-224ENST00000591764 HOXB1P14653 301 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-224ENST00000591764 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
DNMT1-224ENST00000591764 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.35
DNMT1-224ENST00000591764 LTKP29376 864 aa12.83□□□□□ -0.36
DNMT1-224ENST00000591764 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
DNMT1-224ENST00000591764 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
DNMT1-224ENST00000591764 ANKRD30AQ9BXX3 1397 aa12.82□□□□□ -0.36
DNMT1-224ENST00000591764 FAM135BQ49AJ0 1406 aa12.82□□□□□ -0.36
DNMT1-224ENST00000591764 ABCC5O15440 1437 aa12.81□□□□□ -0.36
DNMT1-224ENST00000591764 KANK4Q5T7N3 995 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-224ENST00000591764 XIRP1Q702N8 1843 aaKnown RBP12.81□□□□□ -0.36
DNMT1-224ENST00000591764 DAPK1P53355 1430 aa12.8□□□□□ -0.36
DNMT1-224ENST00000591764 LMTK2Q8IWU2 1503 aa12.8□□□□□ -0.36
DNMT1-224ENST00000591764 NKTRP30414 1462 aaKnown RBP12.79□□□□□ -0.36
DNMT1-224ENST00000591764 KCNA6P17658 529 aa12.79□□□□□ -0.36
DNMT1-224ENST00000591764 SPNS2Q8IVW8 549 aa12.79□□□□□ -0.36
DNMT1-224ENST00000591764 KRTAP3-3Q9BYR6 98 aa12.79□□□□□ -0.36
DNMT1-224ENST00000591764 KRTAP3-2Q9BYR7 98 aa12.79□□□□□ -0.36
DNMT1-224ENST00000591764 TMEM94Q12767 1356 aa12.79□□□□□ -0.36
DNMT1-224ENST00000591764 ADGRB3O60242 1522 aa12.78□□□□□ -0.36
DNMT1-224ENST00000591764 MSH6P52701 1360 aa12.78□□□□□ -0.36
DNMT1-224ENST00000591764 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
DNMT1-224ENST00000591764 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-224ENST00000591764 BCANQ96GW7 911 aa12.77□□□□□ -0.37
DNMT1-224ENST00000591764 SLC52A1Q9NWF4 448 aa12.77□□□□□ -0.37
DNMT1-224ENST00000591764 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.37
DNMT1-224ENST00000591764 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
DNMT1-224ENST00000591764 IDI1Q13907 227 aa12.76□□□□□ -0.37
DNMT1-224ENST00000591764 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
DNMT1-224ENST00000591764 NWD1Q149M9 1564 aa12.75□□□□□ -0.37
DNMT1-224ENST00000591764 NOS1P29475 1434 aa12.74□□□□□ -0.37
DNMT1-224ENST00000591764 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
DNMT1-224ENST00000591764 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
DNMT1-224ENST00000591764 SLC26A8Q96RN1 970 aa12.74□□□□□ -0.37
DNMT1-224ENST00000591764 TET3O43151 1660 aa12.73□□□□□ -0.37
DNMT1-224ENST00000591764 PPP1R37O75864 691 aa12.73□□□□□ -0.37
DNMT1-224ENST00000591764 MMRN1Q13201 1228 aa12.73□□□□□ -0.37
DNMT1-224ENST00000591764 GPR153Q6NV75 609 aa12.73□□□□□ -0.37
DNMT1-224ENST00000591764 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
DNMT1-224ENST00000591764 ERBB3P21860 1342 aa12.72□□□□□ -0.37
DNMT1-224ENST00000591764 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
DNMT1-224ENST00000591764 RGS17Q9UGC6 210 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-224ENST00000591764 PHLPP1O60346 1717 aa12.71□□□□□ -0.37
DNMT1-224ENST00000591764 C2orf72A6NCS6 295 aa12.71□□□□□ -0.37
DNMT1-224ENST00000591764 KIF3CO14782 793 aa12.71□□□□□ -0.37
DNMT1-224ENST00000591764 ADGRL2O95490 1459 aa12.71□□□□□ -0.38
DNMT1-224ENST00000591764 JCADQ9P266 1359 aa12.7□□□□□ -0.38
DNMT1-224ENST00000591764 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
DNMT1-224ENST00000591764 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
DNMT1-224ENST00000591764 SLAIN2Q9P270 581 aa12.7□□□□□ -0.38
DNMT1-224ENST00000591764 ANKRD50Q9ULJ7 1429 aa12.7□□□□□ -0.38
DNMT1-224ENST00000591764 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms