RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MINK1Q8N4C8 1332 aaPredicted RBP15.62■□□□□ 0.09
SMAD4-205ENST00000588745 PTCH1Q13635 1447 aa15.62■□□□□ 0.09
SMAD4-205ENST00000588745 ADGRB2O60241 1585 aa15.62■□□□□ 0.09
SMAD4-205ENST00000588745 ANKLE2Q86XL3 938 aa15.62■□□□□ 0.09
SMAD4-205ENST00000588745 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
SMAD4-205ENST00000588745 PARD3Q8TEW0 1356 aa15.61■□□□□ 0.09
SMAD4-205ENST00000588745 YTHDC1Q96MU7 727 aaKnown RBP15.61■□□□□ 0.09
SMAD4-205ENST00000588745 PIK3R4Q99570 1358 aa15.61■□□□□ 0.09
SMAD4-205ENST00000588745 ROBO2Q9HCK4 1378 aa15.61■□□□□ 0.09
SMAD4-205ENST00000588745 ATAD2Q6PL18 1390 aa15.6■□□□□ 0.09
SMAD4-205ENST00000588745 NINLQ9Y2I6 1382 aa15.6■□□□□ 0.09
SMAD4-205ENST00000588745 WAPLQ7Z5K2 1190 aa15.6■□□□□ 0.09
SMAD4-205ENST00000588745 RALBP1Q15311 655 aa15.59■□□□□ 0.09
SMAD4-205ENST00000588745 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
SMAD4-205ENST00000588745 USP32Q8NFA0 1604 aa15.58■□□□□ 0.09
SMAD4-205ENST00000588745 NPHP4O75161 1426 aaPredicted RBP15.58■□□□□ 0.08
SMAD4-205ENST00000588745 SRPK2P78362 688 aaKnown RBP15.58■□□□□ 0.08
SMAD4-205ENST00000588745 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.57■□□□□ 0.08
SMAD4-205ENST00000588745 NPC1L1Q9UHC9 1359 aa15.57■□□□□ 0.08
SMAD4-205ENST00000588745 KNSTRNQ9Y448 316 aa15.57■□□□□ 0.08
SMAD4-205ENST00000588745 MYBBP1AQ9BQG0 1328 aaKnown RBP15.56■□□□□ 0.08
SMAD4-205ENST00000588745 CHD2O14647 1828 aaKnown RBP15.56■□□□□ 0.08
SMAD4-205ENST00000588745 CNGB1Q14028 1251 aaPredicted RBP15.56■□□□□ 0.08
SMAD4-205ENST00000588745 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
SMAD4-205ENST00000588745 ANKRD36BQ8N2N9 1353 aa15.55■□□□□ 0.08
SMAD4-205ENST00000588745 KDM4FA0A1W2PPD8 638 aa15.55■□□□□ 0.08
SMAD4-205ENST00000588745 CDK19Q9BWU1 502 aa15.55■□□□□ 0.08
SMAD4-205ENST00000588745 AMOTL2Q9Y2J4 779 aa15.55■□□□□ 0.08
SMAD4-205ENST00000588745 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
SMAD4-205ENST00000588745 SLC12A5Q9H2X9 1139 aa15.54■□□□□ 0.08
SMAD4-205ENST00000588745 NSD3Q9BZ95 1437 aa15.54■□□□□ 0.08
SMAD4-205ENST00000588745 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
SMAD4-205ENST00000588745 CCDC184Q52MB2 194 aa15.53■□□□□ 0.08
SMAD4-205ENST00000588745 CC2D1BQ5T0F9 858 aaKnown RBP15.53■□□□□ 0.08
SMAD4-205ENST00000588745 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
SMAD4-205ENST00000588745 NWD1Q149M9 1564 aa15.52■□□□□ 0.08
SMAD4-205ENST00000588745 CARD14Q9BXL6 1004 aa15.52■□□□□ 0.08
SMAD4-205ENST00000588745 ATP7BP35670 1465 aa15.52■□□□□ 0.07
SMAD4-205ENST00000588745 CD163L1Q9NR16 1453 aa15.52■□□□□ 0.07
SMAD4-205ENST00000588745 TOPAZ1Q8N9V7 1692 aa15.51■□□□□ 0.07
SMAD4-205ENST00000588745 CENPBP07199 599 aaPredicted RBP15.51■□□□□ 0.07
SMAD4-205ENST00000588745 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
SMAD4-205ENST00000588745 BRD4O60885 1362 aaPredicted RBP15.51■□□□□ 0.07
SMAD4-205ENST00000588745 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
SMAD4-205ENST00000588745 LMTK3Q96Q04 1460 aa15.49■□□□□ 0.07
SMAD4-205ENST00000588745 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
SMAD4-205ENST00000588745 KCNA6P17658 529 aa15.49■□□□□ 0.07
SMAD4-205ENST00000588745 NLRP13Q86W25 1043 aa15.49■□□□□ 0.07
SMAD4-205ENST00000588745 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
SMAD4-205ENST00000588745 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
SMAD4-205ENST00000588745 ITSN1Q15811 1721 aa15.48■□□□□ 0.07
SMAD4-205ENST00000588745 NALCNQ8IZF0 1738 aa15.48■□□□□ 0.07
SMAD4-205ENST00000588745 NSD2O96028 1365 aa15.47■□□□□ 0.07
SMAD4-205ENST00000588745 MON2Q7Z3U7 1717 aa15.46■□□□□ 0.07
SMAD4-205ENST00000588745 ANKRD26Q9UPS8 1709 aa15.46■□□□□ 0.07
SMAD4-205ENST00000588745 AKAP12Q02952 1782 aa15.46■□□□□ 0.07
SMAD4-205ENST00000588745 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
SMAD4-205ENST00000588745 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.06
SMAD4-205ENST00000588745 FMN2Q9NZ56 1722 aa15.46■□□□□ 0.06
SMAD4-205ENST00000588745 CGNL1Q0VF96 1302 aa15.45■□□□□ 0.06
SMAD4-205ENST00000588745 NUDT16Q96DE0 195 aaKnown RBP15.45■□□□□ 0.06
SMAD4-205ENST00000588745 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
SMAD4-205ENST00000588745 PRR36Q9H6K5 1346 aa15.45■□□□□ 0.06
SMAD4-205ENST00000588745 CPSF1Q10570 1443 aaKnown RBP15.44■□□□□ 0.06
SMAD4-205ENST00000588745 NKTRP30414 1462 aaKnown RBP15.44■□□□□ 0.06
SMAD4-205ENST00000588745 PPP2R1AP30153 589 aa15.43■□□□□ 0.06
SMAD4-205ENST00000588745 CCDC61Q9Y6R9 512 aa15.43■□□□□ 0.06
SMAD4-205ENST00000588745 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
SMAD4-205ENST00000588745 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
SMAD4-205ENST00000588745 HSPA2P54652 639 aa15.42■□□□□ 0.06
SMAD4-205ENST00000588745 FAM9BQ8IZU0 186 aa15.42■□□□□ 0.06
SMAD4-205ENST00000588745 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
SMAD4-205ENST00000588745 EDC4Q6P2E9 1401 aaKnown RBP15.41■□□□□ 0.06
SMAD4-205ENST00000588745 STRCQ7RTU9 1775 aa15.41■□□□□ 0.06
SMAD4-205ENST00000588745 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
SMAD4-205ENST00000588745 RGPD8O14715 1765 aaPredicted RBP15.39■□□□□ 0.05
SMAD4-205ENST00000588745 MORC1Q86VD1 984 aa15.38■□□□□ 0.05
SMAD4-205ENST00000588745 STRCP1A6NGW2 1772 aa15.38■□□□□ 0.05
SMAD4-205ENST00000588745 PLEKHG3A1L390 1219 aa15.36■□□□□ 0.05
SMAD4-205ENST00000588745 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMAD4-205ENST00000588745 NUTM2FA1L443 756 aa15.36■□□□□ 0.05
SMAD4-205ENST00000588745 USP6P35125 1406 aa15.35■□□□□ 0.05
SMAD4-205ENST00000588745 INSRP06213 1382 aa15.35■□□□□ 0.05
SMAD4-205ENST00000588745 FYB1O15117 783 aa15.35■□□□□ 0.05
SMAD4-205ENST00000588745 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
SMAD4-205ENST00000588745 GGNBP2Q9H3C7 697 aa15.35■□□□□ 0.05
SMAD4-205ENST00000588745 POLR3AO14802 1390 aaPredicted RBP15.34■□□□□ 0.05
SMAD4-205ENST00000588745 ACEP12821 1306 aa15.33■□□□□ 0.04
SMAD4-205ENST00000588745 BLMP54132 1417 aaPredicted RBP15.32■□□□□ 0.04
SMAD4-205ENST00000588745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMAD4-205ENST00000588745 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
SMAD4-205ENST00000588745 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
SMAD4-205ENST00000588745 NCOA3Q9Y6Q9 1424 aa15.32■□□□□ 0.04
SMAD4-205ENST00000588745 PROSER2Q86WR7 435 aaPredicted RBP15.31■□□□□ 0.04
SMAD4-205ENST00000588745 SSH2Q76I76 1423 aa15.31■□□□□ 0.04
SMAD4-205ENST00000588745 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
SMAD4-205ENST00000588745 TNNT2P45379 298 aaPredicted RBP15.3■□□□□ 0.04
SMAD4-205ENST00000588745 C14orf37Q86TY3 774 aa15.3■□□□□ 0.04
SMAD4-205ENST00000588745 DCCP43146 1447 aa15.29■□□□□ 0.04
SMAD4-205ENST00000588745 TMEM94Q12767 1356 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms