RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ERBINQ96RT1 1412 aa17.26■□□□□ 0.35
CCDC47-206ENST00000584112 TNS1Q9HBL0 1735 aaKnown RBP17.26■□□□□ 0.35
CCDC47-206ENST00000584112 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
CCDC47-206ENST00000584112 SLIT2O94813 1529 aa17.26■□□□□ 0.35
CCDC47-206ENST00000584112 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
CCDC47-206ENST00000584112 SPON1Q9HCB6 807 aa17.25■□□□□ 0.35
CCDC47-206ENST00000584112 SLC34A2O95436 690 aa17.24■□□□□ 0.35
CCDC47-206ENST00000584112 PIK3R4Q99570 1358 aa17.24■□□□□ 0.35
CCDC47-206ENST00000584112 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
CCDC47-206ENST00000584112 ADGRL3Q9HAR2 1447 aa17.22■□□□□ 0.35
CCDC47-206ENST00000584112 KCNQ2O43526 872 aa17.22■□□□□ 0.35
CCDC47-206ENST00000584112 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
CCDC47-206ENST00000584112 GCC2Q8IWJ2 1684 aa17.22■□□□□ 0.35
CCDC47-206ENST00000584112 DISP2A7MBM2 1401 aa17.21■□□□□ 0.35
CCDC47-206ENST00000584112 NOS1P29475 1434 aa17.21■□□□□ 0.35
CCDC47-206ENST00000584112 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
CCDC47-206ENST00000584112 ANKRD30AQ9BXX3 1397 aa17.21■□□□□ 0.35
CCDC47-206ENST00000584112 A0A0G2JS52 829 aa17.21■□□□□ 0.35
CCDC47-206ENST00000584112 MYT1Q01538 1121 aa17.21■□□□□ 0.35
CCDC47-206ENST00000584112 CAMKK2Q96RR4 588 aa17.21■□□□□ 0.35
CCDC47-206ENST00000584112 CCDC9Q9Y3X0 531 aaKnown RBP17.2■□□□□ 0.34
CCDC47-206ENST00000584112 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
CCDC47-206ENST00000584112 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
CCDC47-206ENST00000584112 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
CCDC47-206ENST00000584112 VPS72Q15906 364 aa17.17■□□□□ 0.34
CCDC47-206ENST00000584112 KANK1Q14678 1352 aa17.16■□□□□ 0.34
CCDC47-206ENST00000584112 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
CCDC47-206ENST00000584112 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
CCDC47-206ENST00000584112 SLC52A1Q9NWF4 448 aa17.16■□□□□ 0.34
CCDC47-206ENST00000584112 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
CCDC47-206ENST00000584112 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
CCDC47-206ENST00000584112 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
CCDC47-206ENST00000584112 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
CCDC47-206ENST00000584112 NRKQ7Z2Y5 1582 aa17.14■□□□□ 0.33
CCDC47-206ENST00000584112 RREB1Q92766 1687 aa17.13■□□□□ 0.33
CCDC47-206ENST00000584112 FAM98CQ17RN3 349 aaKnown RBP17.13■□□□□ 0.33
CCDC47-206ENST00000584112 LMTK2Q8IWU2 1503 aa17.12■□□□□ 0.33
CCDC47-206ENST00000584112 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC47-206ENST00000584112 TRIM37O94972 964 aa17.11■□□□□ 0.33
CCDC47-206ENST00000584112 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
CCDC47-206ENST00000584112 RPRD2Q5VT52 1461 aaKnown RBP17.11■□□□□ 0.33
CCDC47-206ENST00000584112 PXDNQ92626 1479 aa17.1■□□□□ 0.33
CCDC47-206ENST00000584112 MYOM1P52179 1685 aa17.1■□□□□ 0.33
CCDC47-206ENST00000584112 PLCH1Q4KWH8 1693 aa17.1■□□□□ 0.33
CCDC47-206ENST00000584112 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
CCDC47-206ENST00000584112 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
CCDC47-206ENST00000584112 APBA3O96018 575 aa17.08■□□□□ 0.32
CCDC47-206ENST00000584112 NBPF8Q3BBV2 869 aa17.08■□□□□ 0.32
CCDC47-206ENST00000584112 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
CCDC47-206ENST00000584112 ANKRD50Q9ULJ7 1429 aa17.07■□□□□ 0.32
CCDC47-206ENST00000584112 NRXN3Q9Y4C0 1643 aa17.06■□□□□ 0.32
CCDC47-206ENST00000584112 METP08581 1390 aa17.05■□□□□ 0.32
CCDC47-206ENST00000584112 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
CCDC47-206ENST00000584112 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
CCDC47-206ENST00000584112 NWD2Q9ULI1 1742 aa17.04■□□□□ 0.32
CCDC47-206ENST00000584112 PARD3Q8TEW0 1356 aa17.03■□□□□ 0.32
CCDC47-206ENST00000584112 NPHP3Q7Z494 1330 aa17.03■□□□□ 0.32
CCDC47-206ENST00000584112 COL13A1Q5TAT6 717 aaPredicted RBP17.03■□□□□ 0.32
CCDC47-206ENST00000584112 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
CCDC47-206ENST00000584112 FOXO3O43524 673 aa17.02■□□□□ 0.32
CCDC47-206ENST00000584112 HSPA6P17066 643 aa17.02■□□□□ 0.32
CCDC47-206ENST00000584112 SYT17Q9BSW7 474 aa17.02■□□□□ 0.32
CCDC47-206ENST00000584112 FHDC1Q9C0D6 1143 aaPredicted RBP17.02■□□□□ 0.32
CCDC47-206ENST00000584112 PDGFDQ9GZP0 370 aaPredicted RBP17.02■□□□□ 0.32
CCDC47-206ENST00000584112 IQGAP3Q86VI3 1631 aa17■□□□□ 0.31
CCDC47-206ENST00000584112 PRELPP51888 382 aa17■□□□□ 0.31
CCDC47-206ENST00000584112 ESCO1Q5FWF5 840 aa17■□□□□ 0.31
CCDC47-206ENST00000584112 CASZ1Q86V15 1759 aa17■□□□□ 0.31
CCDC47-206ENST00000584112 ZBTB7AO95365 584 aa16.99■□□□□ 0.31
CCDC47-206ENST00000584112 PTGER2P43116 358 aa16.99■□□□□ 0.31
CCDC47-206ENST00000584112 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
CCDC47-206ENST00000584112 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
CCDC47-206ENST00000584112 E9PCH4 1651 aa16.98■□□□□ 0.31
CCDC47-206ENST00000584112 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
CCDC47-206ENST00000584112 FAM83GA6ND36 823 aa16.96■□□□□ 0.31
CCDC47-206ENST00000584112 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.31
CCDC47-206ENST00000584112 NRAPQ86VF7 1730 aa16.96■□□□□ 0.3
CCDC47-206ENST00000584112 THSD7AQ9UPZ6 1657 aa16.95■□□□□ 0.3
CCDC47-206ENST00000584112 PPARGC1BQ86YN6 1023 aaKnown RBP16.95■□□□□ 0.3
CCDC47-206ENST00000584112 PCDH10Q9P2E7 1040 aa16.94■□□□□ 0.3
CCDC47-206ENST00000584112 SPATA31A3Q5VYP0 1347 aa16.94■□□□□ 0.3
CCDC47-206ENST00000584112 ANO8Q9HCE9 1232 aaPredicted RBP16.93■□□□□ 0.3
CCDC47-206ENST00000584112 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
CCDC47-206ENST00000584112 ITGAEP38570 1179 aa16.92■□□□□ 0.3
CCDC47-206ENST00000584112 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
CCDC47-206ENST00000584112 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
CCDC47-206ENST00000584112 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
CCDC47-206ENST00000584112 ROBO2Q9HCK4 1378 aa16.9■□□□□ 0.3
CCDC47-206ENST00000584112 GPR162Q16538 588 aa16.9■□□□□ 0.3
CCDC47-206ENST00000584112 ABCA3Q99758 1704 aa16.89■□□□□ 0.29
CCDC47-206ENST00000584112 NUTM2FA1L443 756 aa16.88■□□□□ 0.29
CCDC47-206ENST00000584112 NUP155O75694 1391 aa16.88■□□□□ 0.29
CCDC47-206ENST00000584112 BTG4Q9NY30 223 aa16.87■□□□□ 0.29
CCDC47-206ENST00000584112 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
CCDC47-206ENST00000584112 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
CCDC47-206ENST00000584112 LRPPRCP42704 1394 aaKnown RBP16.83■□□□□ 0.28
CCDC47-206ENST00000584112 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
CCDC47-206ENST00000584112 DNAJC5GQ8N7S2 189 aa16.83■□□□□ 0.28
CCDC47-206ENST00000584112 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
CCDC47-206ENST00000584112 KIF1BO60333 1816 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms