RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 CHD2O14647 1828 aaKnown RBP4.71□□□□□ -1.65
CCDC178-213ENST00000583930 DLC1Q96QB1 1528 aa4.71□□□□□ -1.66
CCDC178-213ENST00000583930 KANK4Q5T7N3 995 aaPredicted RBP4.71□□□□□ -1.66
CCDC178-213ENST00000583930 MS4A4AQ96JQ5 239 aa4.71□□□□□ -1.66
CCDC178-213ENST00000583930 CYB5RLQ6IPT4 315 aa4.71□□□□□ -1.66
CCDC178-213ENST00000583930 SLC24A3Q9HC58 644 aa4.71□□□□□ -1.66
CCDC178-213ENST00000583930 TRPM1Q7Z4N2 1603 aa4.7□□□□□ -1.66
CCDC178-213ENST00000583930 CPS1P31327 1500 aa4.7□□□□□ -1.66
CCDC178-213ENST00000583930 KIF12Q96FN5 646 aa4.7□□□□□ -1.66
CCDC178-213ENST00000583930 LARP6Q9BRS8 491 aaKnown RBP4.7□□□□□ -1.66
CCDC178-213ENST00000583930 LRRC7Q96NW7 1537 aa4.7□□□□□ -1.66
CCDC178-213ENST00000583930 UHRF1BP1Q6BDS2 1440 aa4.7□□□□□ -1.66
CCDC178-213ENST00000583930 ANKRD50Q9ULJ7 1429 aa4.7□□□□□ -1.66
CCDC178-213ENST00000583930 BRPF1P55201 1214 aaPredicted RBP4.69□□□□□ -1.66
CCDC178-213ENST00000583930 SETD5Q9C0A6 1442 aa4.69□□□□□ -1.66
CCDC178-213ENST00000583930 PTPRMP28827 1452 aa4.69□□□□□ -1.66
CCDC178-213ENST00000583930 TOPAZ1Q8N9V7 1692 aa4.69□□□□□ -1.66
CCDC178-213ENST00000583930 XIRP1Q702N8 1843 aaKnown RBP4.69□□□□□ -1.66
CCDC178-213ENST00000583930 KIF15Q9NS87 1388 aa4.69□□□□□ -1.66
CCDC178-213ENST00000583930 SPATA31E1Q6ZUB1 1445 aa4.69□□□□□ -1.66
CCDC178-213ENST00000583930 LOC105371045A0A1W2PR82 267 aa4.68□□□□□ -1.66
CCDC178-213ENST00000583930 GABBR2O75899 941 aa4.68□□□□□ -1.66
CCDC178-213ENST00000583930 FAM69CQ0P6D2 419 aa4.68□□□□□ -1.66
CCDC178-213ENST00000583930 P3H3Q8IVL6 736 aa4.68□□□□□ -1.66
CCDC178-213ENST00000583930 STAC3Q96MF2 364 aa4.68□□□□□ -1.66
CCDC178-213ENST00000583930 NCOA3Q9Y6Q9 1424 aa4.68□□□□□ -1.66
CCDC178-213ENST00000583930 E2F4Q16254 413 aa4.68□□□□□ -1.66
CCDC178-213ENST00000583930 ZC3H15Q8WU90 426 aaKnown RBP4.68□□□□□ -1.66
CCDC178-213ENST00000583930 ZRANB1Q9UGI0 708 aa4.67□□□□□ -1.66
CCDC178-213ENST00000583930 MLLT3P42568 568 aaPredicted RBP4.67□□□□□ -1.66
CCDC178-213ENST00000583930 TECPR2O15040 1411 aa4.67□□□□□ -1.66
CCDC178-213ENST00000583930 NEUROD2Q15784 382 aa4.66□□□□□ -1.66
CCDC178-213ENST00000583930 GPBP1L1Q9HC44 474 aaPredicted RBP4.66□□□□□ -1.66
CCDC178-213ENST00000583930 CFDP1Q9UEE9 299 aaPredicted RBP4.66□□□□□ -1.66
CCDC178-213ENST00000583930 ARHGEF28Q8N1W1 1705 aaKnown RBP4.66□□□□□ -1.66
CCDC178-213ENST00000583930 USP32Q8NFA0 1604 aa4.66□□□□□ -1.66
CCDC178-213ENST00000583930 DPY19L2Q6NUT2 758 aa4.66□□□□□ -1.66
CCDC178-213ENST00000583930 ZNF579Q8NAF0 562 aaKnown RBP4.66□□□□□ -1.66
CCDC178-213ENST00000583930 RYDENQ9NUL5 291 aaKnown RBP4.66□□□□□ -1.66
CCDC178-213ENST00000583930 RBM26Q5T8P6 1007 aaKnown RBP4.66□□□□□ -1.66
CCDC178-213ENST00000583930 ADGRB1O14514 1584 aa4.65□□□□□ -1.66
CCDC178-213ENST00000583930 SPAG9O60271 1321 aaKnown RBP4.65□□□□□ -1.66
CCDC178-213ENST00000583930 NKTRP30414 1462 aaKnown RBP4.65□□□□□ -1.66
CCDC178-213ENST00000583930 ITSN1Q15811 1721 aa4.65□□□□□ -1.67
CCDC178-213ENST00000583930 PIK3R4Q99570 1358 aa4.65□□□□□ -1.67
CCDC178-213ENST00000583930 CD44P16070 742 aaKnown RBP4.65□□□□□ -1.67
CCDC178-213ENST00000583930 MS4A3Q96HJ5 214 aa4.65□□□□□ -1.67
CCDC178-213ENST00000583930 MST1RQ04912 1400 aa4.64□□□□□ -1.67
CCDC178-213ENST00000583930 TMEM132AQ24JP5 1023 aa4.64□□□□□ -1.67
CCDC178-213ENST00000583930 TMEM106CQ9BVX2 250 aa4.64□□□□□ -1.67
CCDC178-213ENST00000583930 STRCP1A6NGW2 1772 aa4.64□□□□□ -1.67
CCDC178-213ENST00000583930 CRYBG1Q9Y4K1 1723 aa4.64□□□□□ -1.67
CCDC178-213ENST00000583930 PHRF1Q9P1Y6 1649 aaKnown RBP4.64□□□□□ -1.67
CCDC178-213ENST00000583930 ANKRD30BQ9BXX2 1392 aa4.64□□□□□ -1.67
CCDC178-213ENST00000583930 GPRASP1Q5JY77 1395 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 NLRP6P59044 892 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 FMN2Q9NZ56 1722 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 KIF1AQ12756 1690 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 LTBP4Q8N2S1 1624 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 CDC42BPGQ6DT37 1551 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 ASXL1Q8IXJ9 1541 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 AKAP12Q02952 1782 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 KANK1Q14678 1352 aa4.63□□□□□ -1.67
CCDC178-213ENST00000583930 ANKRD26Q9UPS8 1709 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 TESPA1A2RU30 521 aaPredicted RBP4.62□□□□□ -1.67
CCDC178-213ENST00000583930 COL22A1Q8NFW1 1626 aaPredicted RBP4.62□□□□□ -1.67
CCDC178-213ENST00000583930 PTCH1Q13635 1447 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 NRKQ7Z2Y5 1582 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 RPGRIP1LQ68CZ1 1315 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 PIK3C2GO75747 1445 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 ABCC6O95255 1503 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 NHSL1Q5SYE7 1610 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 RALGAPBQ86X10 1494 aa4.62□□□□□ -1.67
CCDC178-213ENST00000583930 PAK3O75914 559 aaPredicted RBP4.61□□□□□ -1.67
CCDC178-213ENST00000583930 C14orf37Q86TY3 774 aa4.61□□□□□ -1.67
CCDC178-213ENST00000583930 ARHGEF1Q92888 912 aaKnown RBP4.61□□□□□ -1.67
CCDC178-213ENST00000583930 C19orf67A6NJJ6 358 aa4.61□□□□□ -1.67
CCDC178-213ENST00000583930 DDX27Q96GQ7 796 aaKnown RBP4.61□□□□□ -1.67
CCDC178-213ENST00000583930 DCCP43146 1447 aa4.61□□□□□ -1.67
CCDC178-213ENST00000583930 DPYSL4O14531 572 aa4.61□□□□□ -1.67
CCDC178-213ENST00000583930 NALCNQ8IZF0 1738 aa4.61□□□□□ -1.67
CCDC178-213ENST00000583930 CRISPLD2Q9H0B8 497 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 RAB3GAP2Q9H2M9 1393 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 MON2Q7Z3U7 1717 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 MED1Q15648 1581 aaPredicted RBP4.6□□□□□ -1.67
CCDC178-213ENST00000583930 PLEKHG1Q9ULL1 1385 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 SBNO2Q9Y2G9 1366 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 POTEMA6NI47 508 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 EMILIN3Q9NT22 766 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 ZNF644Q9H582 1327 aaPredicted RBP4.6□□□□□ -1.67
CCDC178-213ENST00000583930 MYOM1P52179 1685 aa4.6□□□□□ -1.67
CCDC178-213ENST00000583930 DHX57Q6P158 1386 aaKnown RBP4.59□□□□□ -1.67
CCDC178-213ENST00000583930 GALR2O43603 387 aaPredicted RBP4.59□□□□□ -1.67
CCDC178-213ENST00000583930 GOLGA2Q08379 1002 aa4.59□□□□□ -1.67
CCDC178-213ENST00000583930 IL27Q8NEV9 243 aa4.59□□□□□ -1.67
CCDC178-213ENST00000583930 MARF1Q9Y4F3 1742 aaKnown RBP4.59□□□□□ -1.67
CCDC178-213ENST00000583930 ZMYM3Q14202 1370 aa4.59□□□□□ -1.67
CCDC178-213ENST00000583930 SIRT1Q96EB6 747 aa4.59□□□□□ -1.67
CCDC178-213ENST00000583930 FAM135BQ49AJ0 1406 aa4.59□□□□□ -1.67
CCDC178-213ENST00000583930 QRICH2Q9H0J4 1663 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms