RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 NINLQ9Y2I6 1382 aa31.28■■■□□ 2.6
LIMD2-205ENST00000578402 SAFB2Q14151 953 aaKnown RBP eCLIP31.27■■■□□ 2.6
LIMD2-205ENST00000578402 PIK3R4Q99570 1358 aa31.27■■■□□ 2.6
LIMD2-205ENST00000578402 ATAD2Q6PL18 1390 aa31.25■■■□□ 2.59
LIMD2-205ENST00000578402 PARD3Q8TEW0 1356 aa31.25■■■□□ 2.59
LIMD2-205ENST00000578402 NPC1L1Q9UHC9 1359 aa31.24■■■□□ 2.59
LIMD2-205ENST00000578402 PLEKHH1Q9ULM0 1364 aa31.24■■■□□ 2.59
LIMD2-205ENST00000578402 MINK1Q8N4C8 1332 aaPredicted RBP31.24■■■□□ 2.59
LIMD2-205ENST00000578402 SLC26A8Q96RN1 970 aa31.24■■■□□ 2.59
LIMD2-205ENST00000578402 KNSTRNQ9Y448 316 aa31.24■■■□□ 2.59
LIMD2-205ENST00000578402 YTHDC1Q96MU7 727 aaKnown RBP31.23■■■□□ 2.59
LIMD2-205ENST00000578402 WAPLQ7Z5K2 1190 aa31.22■■■□□ 2.59
LIMD2-205ENST00000578402 PTCH1Q13635 1447 aa31.22■■■□□ 2.59
LIMD2-205ENST00000578402 PTPRUQ92729 1446 aa31.22■■■□□ 2.59
LIMD2-205ENST00000578402 ROBO2Q9HCK4 1378 aa31.2■■■□□ 2.58
LIMD2-205ENST00000578402 CENPBP07199 599 aaPredicted RBP31.19■■■□□ 2.58
LIMD2-205ENST00000578402 XRN1Q8IZH2 1706 aaKnown RBP31.19■■■□□ 2.58
LIMD2-205ENST00000578402 MYBBP1AQ9BQG0 1328 aaKnown RBP31.18■■■□□ 2.58
LIMD2-205ENST00000578402 SRPK2P78362 688 aaKnown RBP31.18■■■□□ 2.58
LIMD2-205ENST00000578402 CABP2Q9NPB3 220 aa31.18■■■□□ 2.58
LIMD2-205ENST00000578402 ADGRB2O60241 1585 aa31.17■■■□□ 2.58
LIMD2-205ENST00000578402 AMER1Q5JTC6 1135 aaPredicted RBP31.16■■■□□ 2.58
LIMD2-205ENST00000578402 TMC1Q8TDI8 760 aa31.15■■■□□ 2.58
LIMD2-205ENST00000578402 FBXO41Q8TF61 875 aa31.15■■■□□ 2.58
LIMD2-205ENST00000578402 CDK19Q9BWU1 502 aa31.15■■■□□ 2.58
LIMD2-205ENST00000578402 ANKRD36BQ8N2N9 1353 aa31.15■■■□□ 2.58
LIMD2-205ENST00000578402 USP32Q8NFA0 1604 aa31.15■■■□□ 2.58
LIMD2-205ENST00000578402 SLC12A5Q9H2X9 1139 aa31.14■■■□□ 2.57
LIMD2-205ENST00000578402 MRS2Q9HD23 443 aa31.14■■■□□ 2.57
LIMD2-205ENST00000578402 AMOTL2Q9Y2J4 779 aa31.14■■■□□ 2.57
LIMD2-205ENST00000578402 NPHP4O75161 1426 aaPredicted RBP31.13■■■□□ 2.57
LIMD2-205ENST00000578402 BRD4O60885 1362 aaPredicted RBP31.12■■■□□ 2.57
LIMD2-205ENST00000578402 CARD14Q9BXL6 1004 aa31.11■■■□□ 2.57
LIMD2-205ENST00000578402 WASLO00401 505 aaPredicted RBP31.1■■■□□ 2.57
LIMD2-205ENST00000578402 CC2D1BQ5T0F9 858 aaKnown RBP31.1■■■□□ 2.57
LIMD2-205ENST00000578402 CCDC184Q52MB2 194 aa31.09■■■□□ 2.57
LIMD2-205ENST00000578402 CNGB1Q14028 1251 aaPredicted RBP31.08■■■□□ 2.57
LIMD2-205ENST00000578402 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.08■■■□□ 2.57
LIMD2-205ENST00000578402 NLRP13Q86W25 1043 aa31.08■■■□□ 2.57
LIMD2-205ENST00000578402 NSD3Q9BZ95 1437 aa31.07■■■□□ 2.57
LIMD2-205ENST00000578402 CHD2O14647 1828 aaKnown RBP31.07■■■□□ 2.57
LIMD2-205ENST00000578402 ATP7BP35670 1465 aa31.04■■■□□ 2.56
LIMD2-205ENST00000578402 TERF2IPQ9NYB0 399 aa31.03■■■□□ 2.56
LIMD2-205ENST00000578402 CD163L1Q9NR16 1453 aa31.02■■■□□ 2.56
LIMD2-205ENST00000578402 A0A1W2PP64 1363 aa31.02■■■□□ 2.56
LIMD2-205ENST00000578402 LMTK3Q96Q04 1460 aa31■■■□□ 2.55
LIMD2-205ENST00000578402 NSD2O96028 1365 aa31■■■□□ 2.55
LIMD2-205ENST00000578402 CGNL1Q0VF96 1302 aa30.99■■■□□ 2.55
LIMD2-205ENST00000578402 KCNA6P17658 529 aa30.98■■■□□ 2.55
LIMD2-205ENST00000578402 HDGFL2Q7Z4V5 671 aaPredicted RBP30.97■■■□□ 2.55
LIMD2-205ENST00000578402 NCKAP5LQ9HCH0 1330 aa30.97■■■□□ 2.55
LIMD2-205ENST00000578402 NWD1Q149M9 1564 aa30.96■■■□□ 2.55
LIMD2-205ENST00000578402 NUDT16Q96DE0 195 aaKnown RBP30.95■■■□□ 2.55
LIMD2-205ENST00000578402 CABP1Q9NZU7 370 aa30.95■■■□□ 2.55
LIMD2-205ENST00000578402 CCDC61Q9Y6R9 512 aa30.94■■■□□ 2.54
LIMD2-205ENST00000578402 PPIP5K1Q6PFW1 1433 aa30.94■■■□□ 2.54
LIMD2-205ENST00000578402 TOPAZ1Q8N9V7 1692 aa30.93■■■□□ 2.54
LIMD2-205ENST00000578402 PNISRQ8TF01 805 aaKnown RBP30.93■■■□□ 2.54
LIMD2-205ENST00000578402 CDC42BPGQ6DT37 1551 aa30.92■■■□□ 2.54
LIMD2-205ENST00000578402 PPP2R1AP30153 589 aa30.92■■■□□ 2.54
LIMD2-205ENST00000578402 CPSF1Q10570 1443 aaKnown RBP30.91■■■□□ 2.54
LIMD2-205ENST00000578402 FAM9BQ8IZU0 186 aa30.9■■■□□ 2.54
LIMD2-205ENST00000578402 PRR36Q9H6K5 1346 aa30.88■■■□□ 2.53
LIMD2-205ENST00000578402 ITSN1Q15811 1721 aa30.86■■■□□ 2.53
LIMD2-205ENST00000578402 AKAP12Q02952 1782 aa30.86■■■□□ 2.53
LIMD2-205ENST00000578402 ANKRD26Q9UPS8 1709 aa30.85■■■□□ 2.53
LIMD2-205ENST00000578402 ANKARQ7Z5J8 1434 aa30.85■■■□□ 2.53
LIMD2-205ENST00000578402 MON2Q7Z3U7 1717 aa30.84■■■□□ 2.53
LIMD2-205ENST00000578402 NKTRP30414 1462 aaKnown RBP30.84■■■□□ 2.53
LIMD2-205ENST00000578402 EDC4Q6P2E9 1401 aaKnown RBP30.84■■■□□ 2.53
LIMD2-205ENST00000578402 MORC1Q86VD1 984 aa30.83■■■□□ 2.53
LIMD2-205ENST00000578402 INSRP06213 1382 aa30.83■■■□□ 2.53
LIMD2-205ENST00000578402 NALCNQ8IZF0 1738 aa30.82■■■□□ 2.52
LIMD2-205ENST00000578402 FMN2Q9NZ56 1722 aa30.82■■■□□ 2.52
LIMD2-205ENST00000578402 KIF20BQ96Q89 1820 aa30.82■■■□□ 2.52
LIMD2-205ENST00000578402 PLEKHG3A1L390 1219 aa30.82■■■□□ 2.52
LIMD2-205ENST00000578402 HSPA2P54652 639 aa30.82■■■□□ 2.52
LIMD2-205ENST00000578402 ZNF692Q9BU19 519 aaPredicted RBP30.82■■■□□ 2.52
LIMD2-205ENST00000578402 ADGRL3Q9HAR2 1447 aa30.81■■■□□ 2.52
LIMD2-205ENST00000578402 HNRNPUQ00839 825 aaKnown RBP eCLIP30.8■■■□□ 2.52
LIMD2-205ENST00000578402 FYB1O15117 783 aa30.77■■■□□ 2.52
LIMD2-205ENST00000578402 POLR3AO14802 1390 aaPredicted RBP30.74■■■□□ 2.51
LIMD2-205ENST00000578402 NRKQ7Z2Y5 1582 aa30.73■■■□□ 2.51
LIMD2-205ENST00000578402 STRCQ7RTU9 1775 aa30.72■■■□□ 2.51
LIMD2-205ENST00000578402 ACEP12821 1306 aa30.7■■■□□ 2.51
LIMD2-205ENST00000578402 GGNBP2Q9H3C7 697 aa30.7■■■□□ 2.51
LIMD2-205ENST00000578402 ZBED9Q6R2W3 1325 aa30.69■■■□□ 2.5
LIMD2-205ENST00000578402 USP6P35125 1406 aa30.69■■■□□ 2.5
LIMD2-205ENST00000578402 NCOA3Q9Y6Q9 1424 aa30.69■■■□□ 2.5
LIMD2-205ENST00000578402 RGPD8O14715 1765 aaPredicted RBP30.68■■■□□ 2.5
LIMD2-205ENST00000578402 BLMP54132 1417 aaPredicted RBP30.67■■■□□ 2.5
LIMD2-205ENST00000578402 NUTM2FA1L443 756 aa30.67■■■□□ 2.5
LIMD2-205ENST00000578402 SCAF1Q9H7N4 1312 aaKnown RBP30.66■■■□□ 2.5
LIMD2-205ENST00000578402 PROSER2Q86WR7 435 aaPredicted RBP30.65■■■□□ 2.5
LIMD2-205ENST00000578402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.65■■■□□ 2.5
LIMD2-205ENST00000578402 SSH2Q76I76 1423 aa30.64■■■□□ 2.5
LIMD2-205ENST00000578402 STRCP1A6NGW2 1772 aa30.63■■■□□ 2.49
LIMD2-205ENST00000578402 WDR43Q15061 677 aaKnown RBP eCLIP30.63■■■□□ 2.49
LIMD2-205ENST00000578402 CERKQ8TCT0 537 aa30.63■■■□□ 2.49
LIMD2-205ENST00000578402 TNNT2P45379 298 aaPredicted RBP30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms