RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
POLR2A-204ENST00000575547 UPF1Q92900 1129 aaKnown RBP eCLIP9.69□□□□□ -0.86
POLR2A-204ENST00000575547 NPHP3Q7Z494 1330 aa9.68□□□□□ -0.86
POLR2A-204ENST00000575547 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
POLR2A-204ENST00000575547 USP21Q9UK80 565 aa9.68□□□□□ -0.86
POLR2A-204ENST00000575547 LRPPRCP42704 1394 aaKnown RBP9.67□□□□□ -0.86
POLR2A-204ENST00000575547 ABCC11Q96J66 1382 aa9.66□□□□□ -0.86
POLR2A-204ENST00000575547 PPLO60437 1756 aa9.66□□□□□ -0.86
POLR2A-204ENST00000575547 NALCNQ8IZF0 1738 aa9.66□□□□□ -0.86
POLR2A-204ENST00000575547 CFAP70Q5T0N1 1121 aa9.66□□□□□ -0.86
POLR2A-204ENST00000575547 SIRT1Q96EB6 747 aa9.66□□□□□ -0.86
POLR2A-204ENST00000575547 C14orf93Q9H972 538 aaKnown RBP9.66□□□□□ -0.86
POLR2A-204ENST00000575547 POGKQ9P215 609 aa9.66□□□□□ -0.86
POLR2A-204ENST00000575547 TRPC5Q9UL62 973 aaPredicted RBP9.66□□□□□ -0.86
POLR2A-204ENST00000575547 NHSL1Q5SYE7 1610 aa9.66□□□□□ -0.86
POLR2A-204ENST00000575547 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.86
POLR2A-204ENST00000575547 DHX57Q6P158 1386 aaKnown RBP9.65□□□□□ -0.86
POLR2A-204ENST00000575547 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
POLR2A-204ENST00000575547 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
POLR2A-204ENST00000575547 SETD1AO15047 1707 aaKnown RBP9.65□□□□□ -0.87
POLR2A-204ENST00000575547 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
POLR2A-204ENST00000575547 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
POLR2A-204ENST00000575547 PSME1Q06323 249 aa9.64□□□□□ -0.87
POLR2A-204ENST00000575547 KRT28Q7Z3Y7 464 aa9.64□□□□□ -0.87
POLR2A-204ENST00000575547 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
POLR2A-204ENST00000575547 PLEKHH1Q9ULM0 1364 aa9.63□□□□□ -0.87
POLR2A-204ENST00000575547 LMOD2Q6P5Q4 547 aa9.63□□□□□ -0.87
POLR2A-204ENST00000575547 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
POLR2A-204ENST00000575547 PRAG1Q86YV5 1406 aa9.63□□□□□ -0.87
POLR2A-204ENST00000575547 YTHDC2Q9H6S0 1430 aaKnown RBP9.63□□□□□ -0.87
POLR2A-204ENST00000575547 CDK12Q9NYV4 1490 aaPredicted RBP9.62□□□□□ -0.87
POLR2A-204ENST00000575547 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
POLR2A-204ENST00000575547 RAB3GAP2Q9H2M9 1393 aa9.62□□□□□ -0.87
POLR2A-204ENST00000575547 DCAF11Q8TEB1 546 aa9.61□□□□□ -0.87
POLR2A-204ENST00000575547 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
POLR2A-204ENST00000575547 PIK3C2GO75747 1445 aa9.61□□□□□ -0.87
POLR2A-204ENST00000575547 SPATA31A3Q5VYP0 1347 aa9.6□□□□□ -0.87
POLR2A-204ENST00000575547 TECPR2O15040 1411 aa9.6□□□□□ -0.87
POLR2A-204ENST00000575547 UNC5CLQ8IV45 518 aa9.59□□□□□ -0.87
POLR2A-204ENST00000575547 PMFBP1Q8TBY8 1022 aa9.59□□□□□ -0.87
POLR2A-204ENST00000575547 GJD4Q96KN9 370 aaPredicted RBP9.59□□□□□ -0.87
POLR2A-204ENST00000575547 CDC42BPGQ6DT37 1551 aa9.58□□□□□ -0.88
POLR2A-204ENST00000575547 RGS12O14924 1447 aa9.58□□□□□ -0.88
POLR2A-204ENST00000575547 LAMC1P11047 1609 aa9.58□□□□□ -0.88
POLR2A-204ENST00000575547 CABLES1Q8TDN4 633 aa9.58□□□□□ -0.88
POLR2A-204ENST00000575547 STAC3Q96MF2 364 aa9.58□□□□□ -0.88
POLR2A-204ENST00000575547 HIRIP3Q9BW71 556 aaPredicted RBP9.58□□□□□ -0.88
POLR2A-204ENST00000575547 CCDC9Q9Y3X0 531 aaKnown RBP9.58□□□□□ -0.88
POLR2A-204ENST00000575547 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
POLR2A-204ENST00000575547 PXDNQ92626 1479 aa9.58□□□□□ -0.88
POLR2A-204ENST00000575547 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
POLR2A-204ENST00000575547 HRCP23327 699 aa9.57□□□□□ -0.88
POLR2A-204ENST00000575547 ATRNO75882 1429 aa9.56□□□□□ -0.88
POLR2A-204ENST00000575547 IFT172Q9UG01 1749 aa9.56□□□□□ -0.88
POLR2A-204ENST00000575547 MYOM2P54296 1465 aa9.56□□□□□ -0.88
POLR2A-204ENST00000575547 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
POLR2A-204ENST00000575547 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
POLR2A-204ENST00000575547 BCL9LQ86UU0 1499 aa9.55□□□□□ -0.88
POLR2A-204ENST00000575547 PAK3O75914 559 aaPredicted RBP9.55□□□□□ -0.88
POLR2A-204ENST00000575547 NRXN1Q9ULB1 1477 aa9.54□□□□□ -0.88
POLR2A-204ENST00000575547 SBNO1A3KN83 1393 aa9.54□□□□□ -0.88
POLR2A-204ENST00000575547 GPRASP1Q5JY77 1395 aa9.54□□□□□ -0.88
POLR2A-204ENST00000575547 COL22A1Q8NFW1 1626 aaPredicted RBP9.54□□□□□ -0.88
POLR2A-204ENST00000575547 WASLO00401 505 aaPredicted RBP9.54□□□□□ -0.88
POLR2A-204ENST00000575547 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
POLR2A-204ENST00000575547 KNDC1Q76NI1 1749 aa9.53□□□□□ -0.88
POLR2A-204ENST00000575547 FMN2Q9NZ56 1722 aa9.53□□□□□ -0.88
POLR2A-204ENST00000575547 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
POLR2A-204ENST00000575547 A0A0G2JS52 829 aa9.53□□□□□ -0.88
POLR2A-204ENST00000575547 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
POLR2A-204ENST00000575547 MYT1Q01538 1121 aa9.53□□□□□ -0.88
POLR2A-204ENST00000575547 SF3B2Q13435 895 aaKnown RBP9.53□□□□□ -0.88
POLR2A-204ENST00000575547 TNS3Q68CZ2 1445 aa9.53□□□□□ -0.88
POLR2A-204ENST00000575547 VPS72Q15906 364 aa9.52□□□□□ -0.89
POLR2A-204ENST00000575547 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
POLR2A-204ENST00000575547 RGPD8O14715 1765 aaPredicted RBP9.52□□□□□ -0.89
POLR2A-204ENST00000575547 KIF1AQ12756 1690 aa9.51□□□□□ -0.89
POLR2A-204ENST00000575547 EIF3AQ14152 1382 aaKnown RBP9.51□□□□□ -0.89
POLR2A-204ENST00000575547 NUDT16Q96DE0 195 aaKnown RBP9.51□□□□□ -0.89
POLR2A-204ENST00000575547 CDK19Q9BWU1 502 aa9.51□□□□□ -0.89
POLR2A-204ENST00000575547 DLC1Q96QB1 1528 aa9.51□□□□□ -0.89
POLR2A-204ENST00000575547 ANKARQ7Z5J8 1434 aa9.5□□□□□ -0.89
POLR2A-204ENST00000575547 KRT27Q7Z3Y8 459 aa9.5□□□□□ -0.89
POLR2A-204ENST00000575547 BTG4Q9NY30 223 aa9.5□□□□□ -0.89
POLR2A-204ENST00000575547 RALGAPBQ86X10 1494 aa9.5□□□□□ -0.89
POLR2A-204ENST00000575547 SLIT2O94813 1529 aa9.5□□□□□ -0.89
POLR2A-204ENST00000575547 PRR36Q9H6K5 1346 aa9.5□□□□□ -0.89
POLR2A-204ENST00000575547 MARF1Q9Y4F3 1742 aaKnown RBP9.49□□□□□ -0.89
POLR2A-204ENST00000575547 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
POLR2A-204ENST00000575547 FAM98CQ17RN3 349 aaKnown RBP9.48□□□□□ -0.89
POLR2A-204ENST00000575547 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
POLR2A-204ENST00000575547 PRDM11Q9NQV5 511 aa9.48□□□□□ -0.89
POLR2A-204ENST00000575547 CCDC61Q9Y6R9 512 aa9.48□□□□□ -0.89
POLR2A-204ENST00000575547 ADGRB1O14514 1584 aa9.47□□□□□ -0.89
POLR2A-204ENST00000575547 EVA1CP58658 441 aa9.47□□□□□ -0.89
POLR2A-204ENST00000575547 NBPF1Q3BBV0 1214 aa9.47□□□□□ -0.89
POLR2A-204ENST00000575547 NBPF8Q3BBV2 869 aa9.47□□□□□ -0.89
POLR2A-204ENST00000575547 DEFB132Q7Z7B7 95 aa9.47□□□□□ -0.89
POLR2A-204ENST00000575547 USP32Q8NFA0 1604 aa9.46□□□□□ -0.89
POLR2A-204ENST00000575547 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms