RNA–Protein interactions for RNA: ENST00000574909.1

RNF213-219, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-219ENST00000574909 IQGAP3Q86VI3 1631 aa11.29□□□□□ -0.6
RNF213-219ENST00000574909 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
RNF213-219ENST00000574909 ATRNO75882 1429 aa11.28□□□□□ -0.6
RNF213-219ENST00000574909 EP400Q96L91 3159 aa11.28□□□□□ -0.6
RNF213-219ENST00000574909 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
RNF213-219ENST00000574909 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
RNF213-219ENST00000574909 LAMC1P11047 1609 aa11.27□□□□□ -0.6
RNF213-219ENST00000574909 NRXN3Q9Y4C0 1643 aa11.27□□□□□ -0.61
RNF213-219ENST00000574909 NPHP3Q7Z494 1330 aa11.26□□□□□ -0.61
RNF213-219ENST00000574909 VGFO15240 615 aaPredicted RBP11.25□□□□□ -0.61
RNF213-219ENST00000574909 LRPPRCP42704 1394 aaKnown RBP11.25□□□□□ -0.61
RNF213-219ENST00000574909 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
RNF213-219ENST00000574909 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
RNF213-219ENST00000574909 PRAG1Q86YV5 1406 aa11.24□□□□□ -0.61
RNF213-219ENST00000574909 SF3B2Q13435 895 aaKnown RBP11.23□□□□□ -0.61
RNF213-219ENST00000574909 HFM1A2PYH4 1435 aa11.23□□□□□ -0.61
RNF213-219ENST00000574909 BLMP54132 1417 aaPredicted RBP11.23□□□□□ -0.61
RNF213-219ENST00000574909 COL22A1Q8NFW1 1626 aaPredicted RBP11.23□□□□□ -0.61
RNF213-219ENST00000574909 MYOM2P54296 1465 aa11.22□□□□□ -0.61
RNF213-219ENST00000574909 BCL9LQ86UU0 1499 aa11.22□□□□□ -0.61
RNF213-219ENST00000574909 NALCNQ8IZF0 1738 aa11.22□□□□□ -0.61
RNF213-219ENST00000574909 RPGRIP1LQ68CZ1 1315 aa11.21□□□□□ -0.61
RNF213-219ENST00000574909 ESCO1Q5FWF5 840 aa11.21□□□□□ -0.61
RNF213-219ENST00000574909 NEXMIFQ5QGS0 1516 aa11.2□□□□□ -0.62
RNF213-219ENST00000574909 ROBO2Q9HCK4 1378 aa11.2□□□□□ -0.62
RNF213-219ENST00000574909 UNC5CLQ8IV45 518 aa11.2□□□□□ -0.62
RNF213-219ENST00000574909 SUPT16HQ9Y5B9 1047 aaKnown RBP11.2□□□□□ -0.62
RNF213-219ENST00000574909 SPHKAPQ2M3C7 1700 aa11.2□□□□□ -0.62
RNF213-219ENST00000574909 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
RNF213-219ENST00000574909 FOXO3O43524 673 aa11.17□□□□□ -0.62
RNF213-219ENST00000574909 PXDNQ92626 1479 aa11.17□□□□□ -0.62
RNF213-219ENST00000574909 RALGAPBQ86X10 1494 aa11.16□□□□□ -0.62
RNF213-219ENST00000574909 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
RNF213-219ENST00000574909 SLIT2O94813 1529 aa11.15□□□□□ -0.62
RNF213-219ENST00000574909 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.15□□□□□ -0.63
RNF213-219ENST00000574909 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
RNF213-219ENST00000574909 ITGAEP38570 1179 aa11.14□□□□□ -0.63
RNF213-219ENST00000574909 VPS72Q15906 364 aa11.14□□□□□ -0.63
RNF213-219ENST00000574909 SEPT12Q8IYM1 358 aa11.14□□□□□ -0.63
RNF213-219ENST00000574909 LRP5O75197 1615 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 CLTCL1P53675 1640 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 SPATA31A3Q5VYP0 1347 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 BAG6P46379 1132 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
RNF213-219ENST00000574909 PSME1Q06323 249 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 DEFB132Q7Z7B7 95 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
RNF213-219ENST00000574909 MARF1Q9Y4F3 1742 aaKnown RBP11.12□□□□□ -0.63
RNF213-219ENST00000574909 KIF1BO60333 1816 aa11.12□□□□□ -0.63
RNF213-219ENST00000574909 KRT27Q7Z3Y8 459 aa11.12□□□□□ -0.63
RNF213-219ENST00000574909 ANP32EQ9BTT0 268 aa11.12□□□□□ -0.63
RNF213-219ENST00000574909 NAIPQ13075 1403 aa11.11□□□□□ -0.63
RNF213-219ENST00000574909 XPCQ01831 940 aaPredicted RBP11.11□□□□□ -0.63
RNF213-219ENST00000574909 GLI3P10071 1580 aa11.11□□□□□ -0.63
RNF213-219ENST00000574909 TECPR2O15040 1411 aa11.1□□□□□ -0.63
RNF213-219ENST00000574909 KRT28Q7Z3Y7 464 aa11.1□□□□□ -0.63
RNF213-219ENST00000574909 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
RNF213-219ENST00000574909 CCDC9Q9Y3X0 531 aaKnown RBP11.1□□□□□ -0.63
RNF213-219ENST00000574909 ABCC11Q96J66 1382 aa11.09□□□□□ -0.63
RNF213-219ENST00000574909 SIRT1Q96EB6 747 aa11.09□□□□□ -0.63
RNF213-219ENST00000574909 KIF1AQ12756 1690 aa11.08□□□□□ -0.64
RNF213-219ENST00000574909 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
RNF213-219ENST00000574909 USP32Q8NFA0 1604 aa11.08□□□□□ -0.64
RNF213-219ENST00000574909 SBNO1A3KN83 1393 aa11.07□□□□□ -0.64
RNF213-219ENST00000574909 ANKRD30BQ9BXX2 1392 aa11.07□□□□□ -0.64
RNF213-219ENST00000574909 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
RNF213-219ENST00000574909 WAPLQ7Z5K2 1190 aa11.07□□□□□ -0.64
RNF213-219ENST00000574909 TNS3Q68CZ2 1445 aa11.07□□□□□ -0.64
RNF213-219ENST00000574909 A0A0G2JS52 829 aa11.06□□□□□ -0.64
RNF213-219ENST00000574909 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
RNF213-219ENST00000574909 STK26Q9P289 416 aa11.06□□□□□ -0.64
RNF213-219ENST00000574909 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
RNF213-219ENST00000574909 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
RNF213-219ENST00000574909 NWD2Q9ULI1 1742 aa11.05□□□□□ -0.64
RNF213-219ENST00000574909 PPLO60437 1756 aa11.03□□□□□ -0.64
RNF213-219ENST00000574909 DISP2A7MBM2 1401 aa11.03□□□□□ -0.64
RNF213-219ENST00000574909 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
RNF213-219ENST00000574909 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
RNF213-219ENST00000574909 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
RNF213-219ENST00000574909 BRWD3Q6RI45 1802 aa11.02□□□□□ -0.64
RNF213-219ENST00000574909 FAM83GA6ND36 823 aa11.02□□□□□ -0.65
RNF213-219ENST00000574909 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.65
RNF213-219ENST00000574909 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
RNF213-219ENST00000574909 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
RNF213-219ENST00000574909 PARD3Q8TEW0 1356 aa11.02□□□□□ -0.65
RNF213-219ENST00000574909 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
RNF213-219ENST00000574909 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
RNF213-219ENST00000574909 NRXN1Q9ULB1 1477 aa11.01□□□□□ -0.65
RNF213-219ENST00000574909 DCAF8L1A6NGE4 600 aa11.01□□□□□ -0.65
RNF213-219ENST00000574909 R3HDM1Q15032 1099 aaKnown RBP11.01□□□□□ -0.65
RNF213-219ENST00000574909 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
RNF213-219ENST00000574909 PLEKHH1Q9ULM0 1364 aa11.01□□□□□ -0.65
RNF213-219ENST00000574909 KNDC1Q76NI1 1749 aa11.01□□□□□ -0.65
RNF213-219ENST00000574909 TMEM132EQ6IEE7 984 aa11□□□□□ -0.65
RNF213-219ENST00000574909 PIK3C2GO75747 1445 aa11□□□□□ -0.65
RNF213-219ENST00000574909 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
RNF213-219ENST00000574909 PLCH1Q4KWH8 1693 aa10.99□□□□□ -0.65
RNF213-219ENST00000574909 RGL3Q3MIN7 710 aa10.99□□□□□ -0.65
RNF213-219ENST00000574909 FAM196AQ6ZSG2 479 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms