RNA–Protein interactions for RNA: ENST00000574632.5

ABR-230, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-230ENST00000574632 PIK3R4Q99570 1358 aa17.54■□□□□ 0.4
ABR-230ENST00000574632 LMTK3Q96Q04 1460 aa17.54■□□□□ 0.4
ABR-230ENST00000574632 ANP32CO43423 234 aa17.53■□□□□ 0.4
ABR-230ENST00000574632 PUS7Q96PZ0 661 aaKnown RBP17.53■□□□□ 0.4
ABR-230ENST00000574632 PANK3Q9H999 370 aa17.52■□□□□ 0.4
ABR-230ENST00000574632 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
ABR-230ENST00000574632 CABP2Q9NPB3 220 aa17.5■□□□□ 0.39
ABR-230ENST00000574632 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
ABR-230ENST00000574632 KCNA6P17658 529 aa17.49■□□□□ 0.39
ABR-230ENST00000574632 CDK19Q9BWU1 502 aa17.49■□□□□ 0.39
ABR-230ENST00000574632 MYOM1P52179 1685 aa17.48■□□□□ 0.39
ABR-230ENST00000574632 PER1O15534 1290 aaPredicted RBP17.48■□□□□ 0.39
ABR-230ENST00000574632 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
ABR-230ENST00000574632 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
ABR-230ENST00000574632 CHD2O14647 1828 aaKnown RBP17.45■□□□□ 0.38
ABR-230ENST00000574632 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.45■□□□□ 0.38
ABR-230ENST00000574632 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
ABR-230ENST00000574632 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
ABR-230ENST00000574632 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
ABR-230ENST00000574632 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
ABR-230ENST00000574632 ADGRB2O60241 1585 aa17.42■□□□□ 0.38
ABR-230ENST00000574632 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
ABR-230ENST00000574632 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
ABR-230ENST00000574632 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
ABR-230ENST00000574632 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
ABR-230ENST00000574632 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
ABR-230ENST00000574632 STRCQ7RTU9 1775 aa17.4■□□□□ 0.38
ABR-230ENST00000574632 CCER2I3L3R5 266 aa17.39■□□□□ 0.37
ABR-230ENST00000574632 NUDT16Q96DE0 195 aaKnown RBP17.38■□□□□ 0.37
ABR-230ENST00000574632 CABP1Q9NZU7 370 aa17.38■□□□□ 0.37
ABR-230ENST00000574632 ANKRD36BQ8N2N9 1353 aa17.38■□□□□ 0.37
ABR-230ENST00000574632 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
ABR-230ENST00000574632 PRR36Q9H6K5 1346 aa17.37■□□□□ 0.37
ABR-230ENST00000574632 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
ABR-230ENST00000574632 RBM33Q96EV2 1170 aaKnown RBP17.36■□□□□ 0.37
ABR-230ENST00000574632 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
ABR-230ENST00000574632 RALBP1Q15311 655 aa17.35■□□□□ 0.37
ABR-230ENST00000574632 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
ABR-230ENST00000574632 ATP7BP35670 1465 aa17.35■□□□□ 0.37
ABR-230ENST00000574632 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
ABR-230ENST00000574632 A0A1W2PP64 1363 aa17.34■□□□□ 0.37
ABR-230ENST00000574632 NKTRP30414 1462 aaKnown RBP17.34■□□□□ 0.37
ABR-230ENST00000574632 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
ABR-230ENST00000574632 PROSER2Q86WR7 435 aaPredicted RBP17.34■□□□□ 0.37
ABR-230ENST00000574632 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
ABR-230ENST00000574632 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
ABR-230ENST00000574632 TERF2IPQ9NYB0 399 aa17.34■□□□□ 0.37
ABR-230ENST00000574632 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
ABR-230ENST00000574632 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
ABR-230ENST00000574632 ADGRL3Q9HAR2 1447 aa17.32■□□□□ 0.36
ABR-230ENST00000574632 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
ABR-230ENST00000574632 NALCNQ8IZF0 1738 aa17.31■□□□□ 0.36
ABR-230ENST00000574632 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
ABR-230ENST00000574632 STRCP1A6NGW2 1772 aa17.3■□□□□ 0.36
ABR-230ENST00000574632 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
ABR-230ENST00000574632 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
ABR-230ENST00000574632 MYBBP1AQ9BQG0 1328 aaKnown RBP17.29■□□□□ 0.36
ABR-230ENST00000574632 CDC42BPGQ6DT37 1551 aa17.29■□□□□ 0.36
ABR-230ENST00000574632 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
ABR-230ENST00000574632 FMN2Q9NZ56 1722 aa17.28■□□□□ 0.36
ABR-230ENST00000574632 PLEKHG3A1L390 1219 aa17.28■□□□□ 0.36
ABR-230ENST00000574632 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
ABR-230ENST00000574632 TOPAZ1Q8N9V7 1692 aa17.28■□□□□ 0.36
ABR-230ENST00000574632 ANKARQ7Z5J8 1434 aa17.28■□□□□ 0.36
ABR-230ENST00000574632 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
ABR-230ENST00000574632 TMEM94Q12767 1356 aa17.27■□□□□ 0.35
ABR-230ENST00000574632 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
ABR-230ENST00000574632 ZNF335Q9H4Z2 1342 aaPredicted RBP17.25■□□□□ 0.35
ABR-230ENST00000574632 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
ABR-230ENST00000574632 ACEP12821 1306 aa17.24■□□□□ 0.35
ABR-230ENST00000574632 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
ABR-230ENST00000574632 C19orf44Q9H6X5 657 aa17.24■□□□□ 0.35
ABR-230ENST00000574632 NSD2O96028 1365 aa17.24■□□□□ 0.35
ABR-230ENST00000574632 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
ABR-230ENST00000574632 NLRP13Q86W25 1043 aa17.23■□□□□ 0.35
ABR-230ENST00000574632 PMFBP1Q8TBY8 1022 aa17.23■□□□□ 0.35
ABR-230ENST00000574632 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
ABR-230ENST00000574632 BRD4O60885 1362 aaPredicted RBP17.23■□□□□ 0.35
ABR-230ENST00000574632 EDC4Q6P2E9 1401 aaKnown RBP17.22■□□□□ 0.35
ABR-230ENST00000574632 ITSN1Q15811 1721 aa17.22■□□□□ 0.35
ABR-230ENST00000574632 FYB1O15117 783 aa17.22■□□□□ 0.35
ABR-230ENST00000574632 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
ABR-230ENST00000574632 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
ABR-230ENST00000574632 AKAP12Q02952 1782 aa17.22■□□□□ 0.35
ABR-230ENST00000574632 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
ABR-230ENST00000574632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
ABR-230ENST00000574632 GGNBP2Q9H3C7 697 aa17.21■□□□□ 0.35
ABR-230ENST00000574632 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
ABR-230ENST00000574632 MON2Q7Z3U7 1717 aa17.2■□□□□ 0.34
ABR-230ENST00000574632 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
ABR-230ENST00000574632 PHF8Q9UPP1 1060 aa17.19■□□□□ 0.34
ABR-230ENST00000574632 USP6P35125 1406 aa17.19■□□□□ 0.34
ABR-230ENST00000574632 ATF3P18847 181 aa17.18■□□□□ 0.34
ABR-230ENST00000574632 DCCP43146 1447 aa17.18■□□□□ 0.34
ABR-230ENST00000574632 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
ABR-230ENST00000574632 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
ABR-230ENST00000574632 NME9Q86XW9 330 aa17.17■□□□□ 0.34
ABR-230ENST00000574632 MSH6P52701 1360 aa17.16■□□□□ 0.34
ABR-230ENST00000574632 SSH2Q76I76 1423 aa17.16■□□□□ 0.34
ABR-230ENST00000574632 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms