RNA–Protein interactions for RNA: ENST00000574632.5

ABR-230, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-230ENST00000574632 NISCHQ9Y2I1 1504 aa29.35■■■□□ 2.29
ABR-230ENST00000574632 CCDC180Q9P1Z9 1646 aa25.66■■□□□ 1.7
ABR-230ENST00000574632 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
ABR-230ENST00000574632 ABCC9O60706 1549 aa24.51■■□□□ 1.51
ABR-230ENST00000574632 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
ABR-230ENST00000574632 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
ABR-230ENST00000574632 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
ABR-230ENST00000574632 NACADO15069 1562 aa23.99■■□□□ 1.43
ABR-230ENST00000574632 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
ABR-230ENST00000574632 SHROOM4Q9ULL8 1493 aa23.77■■□□□ 1.4
ABR-230ENST00000574632 SCRIBQ14160 1630 aa23.58■■□□□ 1.36
ABR-230ENST00000574632 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
ABR-230ENST00000574632 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
ABR-230ENST00000574632 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
ABR-230ENST00000574632 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
ABR-230ENST00000574632 SUPT5HO00267 1087 aaKnown RBP22.76■■□□□ 1.23
ABR-230ENST00000574632 RSF1Q96T23 1441 aaPredicted RBP22.68■■□□□ 1.22
ABR-230ENST00000574632 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
ABR-230ENST00000574632 BAZ1AQ9NRL2 1556 aaPredicted RBP22.67■■□□□ 1.22
ABR-230ENST00000574632 SMARCA4P51532 1647 aa22.59■■□□□ 1.21
ABR-230ENST00000574632 WIZO95785 1651 aa22.45■■□□□ 1.18
ABR-230ENST00000574632 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
ABR-230ENST00000574632 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.16
ABR-230ENST00000574632 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
ABR-230ENST00000574632 SMARCA2P51531 1590 aa22.26■■□□□ 1.15
ABR-230ENST00000574632 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
ABR-230ENST00000574632 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
ABR-230ENST00000574632 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
ABR-230ENST00000574632 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
ABR-230ENST00000574632 HMGXB3Q12766 1538 aa22.08■■□□□ 1.13
ABR-230ENST00000574632 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
ABR-230ENST00000574632 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
ABR-230ENST00000574632 CHIC1Q5VXU3 224 aa21.68■■□□□ 1.06
ABR-230ENST00000574632 CFTRP13569 1480 aa21.59■■□□□ 1.05
ABR-230ENST00000574632 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
ABR-230ENST00000574632 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
ABR-230ENST00000574632 NESP48681 1621 aa21.44■■□□□ 1.02
ABR-230ENST00000574632 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
ABR-230ENST00000574632 LAMC3Q9Y6N6 1575 aa21.41■■□□□ 1.02
ABR-230ENST00000574632 PRDM2Q13029 1718 aa21.4■■□□□ 1.02
ABR-230ENST00000574632 WRNQ14191 1432 aaPredicted RBP eCLIP21.35■■□□□ 1.01
ABR-230ENST00000574632 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
ABR-230ENST00000574632 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
ABR-230ENST00000574632 SYNJ1O43426 1573 aa21.26■□□□□ 0.99
ABR-230ENST00000574632 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
ABR-230ENST00000574632 CUX1P39880 1505 aa21.2■□□□□ 0.98
ABR-230ENST00000574632 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
ABR-230ENST00000574632 BIVM-ERCC5R4GMW8 1640 aa21.16■□□□□ 0.98
ABR-230ENST00000574632 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
ABR-230ENST00000574632 DNMBPQ6XZF7 1577 aa21.08■□□□□ 0.97
ABR-230ENST00000574632 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
ABR-230ENST00000574632 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
ABR-230ENST00000574632 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
ABR-230ENST00000574632 ERCC6Q03468 1493 aa21.02■□□□□ 0.96
ABR-230ENST00000574632 SOGA1O94964 1423 aa21.02■□□□□ 0.96
ABR-230ENST00000574632 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
ABR-230ENST00000574632 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
ABR-230ENST00000574632 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.94
ABR-230ENST00000574632 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
ABR-230ENST00000574632 EEA1Q15075 1411 aa20.92■□□□□ 0.94
ABR-230ENST00000574632 WDR62O43379 1518 aa20.9■□□□□ 0.94
ABR-230ENST00000574632 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.93
ABR-230ENST00000574632 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
ABR-230ENST00000574632 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
ABR-230ENST00000574632 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
ABR-230ENST00000574632 CUX2O14529 1486 aa20.83■□□□□ 0.93
ABR-230ENST00000574632 KIF27Q86VH2 1401 aa20.83■□□□□ 0.93
ABR-230ENST00000574632 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
ABR-230ENST00000574632 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
ABR-230ENST00000574632 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
ABR-230ENST00000574632 EHMT2Q96KQ7 1210 aa20.73■□□□□ 0.91
ABR-230ENST00000574632 IFT140Q96RY7 1462 aa20.72■□□□□ 0.91
ABR-230ENST00000574632 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
ABR-230ENST00000574632 IGF1RP08069 1367 aa20.69■□□□□ 0.9
ABR-230ENST00000574632 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
ABR-230ENST00000574632 KIF21BO75037 1637 aa20.64■□□□□ 0.9
ABR-230ENST00000574632 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
ABR-230ENST00000574632 PRXQ9BXM0 1461 aa20.63■□□□□ 0.89
ABR-230ENST00000574632 ZNF608Q9ULD9 1512 aaPredicted RBP20.62■□□□□ 0.89
ABR-230ENST00000574632 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
ABR-230ENST00000574632 AQRO60306 1485 aaKnown RBP eCLIP20.61■□□□□ 0.89
ABR-230ENST00000574632 RAPGEF2Q9Y4G8 1499 aa20.59■□□□□ 0.89
ABR-230ENST00000574632 CARMIL1Q5VZK9 1371 aa20.58■□□□□ 0.88
ABR-230ENST00000574632 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
ABR-230ENST00000574632 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
ABR-230ENST00000574632 TNIKQ9UKE5 1360 aa20.52■□□□□ 0.88
ABR-230ENST00000574632 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
ABR-230ENST00000574632 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
ABR-230ENST00000574632 CUL7Q14999 1698 aa20.51■□□□□ 0.87
ABR-230ENST00000574632 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
ABR-230ENST00000574632 FHAD1B1AJZ9 1412 aa20.42■□□□□ 0.86
ABR-230ENST00000574632 SNAPC4Q5SXM2 1469 aa20.41■□□□□ 0.86
ABR-230ENST00000574632 ADAMTS12P58397 1594 aa20.41■□□□□ 0.86
ABR-230ENST00000574632 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
ABR-230ENST00000574632 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
ABR-230ENST00000574632 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
ABR-230ENST00000574632 CLIP1P30622 1438 aa20.28■□□□□ 0.84
ABR-230ENST00000574632 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
ABR-230ENST00000574632 GRIN2AQ12879 1464 aa20.26■□□□□ 0.83
ABR-230ENST00000574632 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms