RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LARP6Q9BRS8 491 aaKnown RBP7.4□□□□□ -1.22
CNOT1-219ENST00000569882 MYOM3Q5VTT5 1437 aa7.4□□□□□ -1.22
CNOT1-219ENST00000569882 INO80Q9ULG1 1556 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-219ENST00000569882 PDE4AP27815 886 aa7.39□□□□□ -1.23
CNOT1-219ENST00000569882 GGT6Q6P531 493 aa7.39□□□□□ -1.23
CNOT1-219ENST00000569882 POTEEQ6S8J3 1075 aa7.39□□□□□ -1.23
CNOT1-219ENST00000569882 BBXQ8WY36 941 aaPredicted RBP7.39□□□□□ -1.23
CNOT1-219ENST00000569882 STAC3Q96MF2 364 aa7.39□□□□□ -1.23
CNOT1-219ENST00000569882 AXIN2Q9Y2T1 843 aa7.39□□□□□ -1.23
CNOT1-219ENST00000569882 PTPN23Q9H3S7 1636 aa7.38□□□□□ -1.23
CNOT1-219ENST00000569882 REREQ9P2R6 1566 aa7.38□□□□□ -1.23
CNOT1-219ENST00000569882 A2MP01023 1474 aa7.38□□□□□ -1.23
CNOT1-219ENST00000569882 MIA2Q96PC5 1412 aa7.38□□□□□ -1.23
CNOT1-219ENST00000569882 SIGLEC1Q9BZZ2 1709 aa7.38□□□□□ -1.23
CNOT1-219ENST00000569882 ADGRD1Q6QNK2 874 aa7.37□□□□□ -1.23
CNOT1-219ENST00000569882 OXER1Q8TDS5 423 aa7.37□□□□□ -1.23
CNOT1-219ENST00000569882 ARHGEF5Q12774 1597 aa7.37□□□□□ -1.23
CNOT1-219ENST00000569882 CNTLNQ9NXG0 1405 aa7.36□□□□□ -1.23
CNOT1-219ENST00000569882 KIF3BO15066 747 aa7.36□□□□□ -1.23
CNOT1-219ENST00000569882 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
CNOT1-219ENST00000569882 KCTD12Q96CX2 325 aaKnown RBP7.36□□□□□ -1.23
CNOT1-219ENST00000569882 DDX27Q96GQ7 796 aaKnown RBP7.36□□□□□ -1.23
CNOT1-219ENST00000569882 AGLP35573 1532 aa7.36□□□□□ -1.23
CNOT1-219ENST00000569882 RTEL1-TNFRSF6BF6WH68 1400 aa7.35□□□□□ -1.23
CNOT1-219ENST00000569882 FGD6Q6ZV73 1430 aa7.35□□□□□ -1.23
CNOT1-219ENST00000569882 CLTCQ00610 1675 aaKnown RBP7.35□□□□□ -1.23
CNOT1-219ENST00000569882 TBC1D12O60347 775 aa7.35□□□□□ -1.23
CNOT1-219ENST00000569882 CEBPAP49715 358 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-219ENST00000569882 MBD5Q9P267 1494 aa7.35□□□□□ -1.23
CNOT1-219ENST00000569882 PREX1Q8TCU6 1659 aa7.35□□□□□ -1.23
CNOT1-219ENST00000569882 SETD1BQ9UPS6 1966 aaKnown RBP7.34□□□□□ -1.23
CNOT1-219ENST00000569882 ITGAEP38570 1179 aa7.34□□□□□ -1.23
CNOT1-219ENST00000569882 MFSD10Q14728 455 aa7.34□□□□□ -1.23
CNOT1-219ENST00000569882 CHIC2Q9UKJ5 165 aa7.34□□□□□ -1.23
CNOT1-219ENST00000569882 CROCC2H7BZ55 1655 aa7.34□□□□□ -1.23
CNOT1-219ENST00000569882 C3P01024 1663 aa7.34□□□□□ -1.23
CNOT1-219ENST00000569882 UHRF1BP1Q6BDS2 1440 aa7.34□□□□□ -1.23
CNOT1-219ENST00000569882 WASHC2CQ9Y4E1 1318 aa7.33□□□□□ -1.24
CNOT1-219ENST00000569882 MROH2AA6NES4 1674 aa7.33□□□□□ -1.24
CNOT1-219ENST00000569882 RRP7BPQ9NSQ0 103 aa7.33□□□□□ -1.24
CNOT1-219ENST00000569882 EMILIN3Q9NT22 766 aa7.33□□□□□ -1.24
CNOT1-219ENST00000569882 PLXNC1O60486 1568 aa7.33□□□□□ -1.24
CNOT1-219ENST00000569882 DHX29Q7Z478 1369 aaKnown RBP7.33□□□□□ -1.24
CNOT1-219ENST00000569882 ANKRD30AQ9BXX3 1397 aa7.33□□□□□ -1.24
CNOT1-219ENST00000569882 DNMT1P26358 1616 aaKnown RBP7.32□□□□□ -1.24
CNOT1-219ENST00000569882 SPRYD3Q8NCJ5 442 aa7.32□□□□□ -1.24
CNOT1-219ENST00000569882 DAPK1P53355 1430 aa7.32□□□□□ -1.24
CNOT1-219ENST00000569882 MAST1Q9Y2H9 1570 aa7.32□□□□□ -1.24
CNOT1-219ENST00000569882 KANK1Q14678 1352 aa7.32□□□□□ -1.24
CNOT1-219ENST00000569882 KIF15Q9NS87 1388 aa7.32□□□□□ -1.24
CNOT1-219ENST00000569882 SHANK2Q9UPX8 1470 aa7.31□□□□□ -1.24
CNOT1-219ENST00000569882 PSEN2P49810 448 aa7.31□□□□□ -1.24
CNOT1-219ENST00000569882 HSPA2P54652 639 aa7.31□□□□□ -1.24
CNOT1-219ENST00000569882 KDM5DQ9BY66 1539 aa7.31□□□□□ -1.24
CNOT1-219ENST00000569882 DUOX2Q9NRD8 1548 aa7.31□□□□□ -1.24
CNOT1-219ENST00000569882 EIF2AK4Q9P2K8 1649 aaKnown RBP7.3□□□□□ -1.24
CNOT1-219ENST00000569882 A0A0G2JS52 829 aa7.3□□□□□ -1.24
CNOT1-219ENST00000569882 PSDA5PKW4 1024 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-219ENST00000569882 PAXIP1Q6ZW49 1069 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-219ENST00000569882 CFAP44Q96MT7 982 aa7.3□□□□□ -1.24
CNOT1-219ENST00000569882 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.3□□□□□ -1.24
CNOT1-219ENST00000569882 CFAP65Q6ZU64 1925 aaKnown RBP7.3□□□□□ -1.24
CNOT1-219ENST00000569882 ZMYM3Q14202 1370 aa7.3□□□□□ -1.24
CNOT1-219ENST00000569882 TCOF1Q13428 1488 aaKnown RBP7.3□□□□□ -1.24
CNOT1-219ENST00000569882 LMTK3Q96Q04 1460 aa7.3□□□□□ -1.24
CNOT1-219ENST00000569882 ABCC5O15440 1437 aa7.29□□□□□ -1.24
CNOT1-219ENST00000569882 ARHGAP33O14559 1287 aa7.29□□□□□ -1.24
CNOT1-219ENST00000569882 EVI5O60447 810 aa7.29□□□□□ -1.24
CNOT1-219ENST00000569882 PTPN5P54829 565 aa7.29□□□□□ -1.24
CNOT1-219ENST00000569882 PPP4R3BQ5MIZ7 849 aa7.29□□□□□ -1.24
CNOT1-219ENST00000569882 IFFO2Q5TF58 517 aa7.29□□□□□ -1.24
CNOT1-219ENST00000569882 DMRTA1Q5VZB9 504 aa7.29□□□□□ -1.24
CNOT1-219ENST00000569882 ZC3H13Q5T200 1668 aaKnown RBP7.28□□□□□ -1.24
CNOT1-219ENST00000569882 FAM135AQ9P2D6 1515 aa7.28□□□□□ -1.24
CNOT1-219ENST00000569882 CEP152O94986 1710 aa7.28□□□□□ -1.24
CNOT1-219ENST00000569882 ZNF454Q8N9F8 522 aa7.28□□□□□ -1.24
CNOT1-219ENST00000569882 NPATQ14207 1427 aa7.27□□□□□ -1.24
CNOT1-219ENST00000569882 ERBINQ96RT1 1412 aa7.27□□□□□ -1.24
CNOT1-219ENST00000569882 MYO3AQ8NEV4 1616 aa7.27□□□□□ -1.25
CNOT1-219ENST00000569882 TK2O00142 265 aa7.27□□□□□ -1.25
CNOT1-219ENST00000569882 MAP3K9P80192 1104 aa7.27□□□□□ -1.25
CNOT1-219ENST00000569882 ANO8Q9HCE9 1232 aaPredicted RBP7.27□□□□□ -1.25
CNOT1-219ENST00000569882 RNF17Q9BXT8 1623 aaKnown RBP7.27□□□□□ -1.25
CNOT1-219ENST00000569882 TNRQ92752 1358 aa7.26□□□□□ -1.25
CNOT1-219ENST00000569882 KCNK17Q96T54 332 aa7.26□□□□□ -1.25
CNOT1-219ENST00000569882 FOSBP53539 338 aa7.25□□□□□ -1.25
CNOT1-219ENST00000569882 CAMSAP1Q5T5Y3 1602 aa7.25□□□□□ -1.25
CNOT1-219ENST00000569882 ANKRD50Q9ULJ7 1429 aa7.25□□□□□ -1.25
CNOT1-219ENST00000569882 CEP170BQ9Y4F5 1589 aaPredicted RBP7.25□□□□□ -1.25
CNOT1-219ENST00000569882 PZPP20742 1482 aa7.24□□□□□ -1.25
CNOT1-219ENST00000569882 ABCC3O15438 1527 aa7.24□□□□□ -1.25
CNOT1-219ENST00000569882 CAMK2BQ13554 666 aa7.24□□□□□ -1.25
CNOT1-219ENST00000569882 ZNF142P52746 1687 aaPredicted RBP7.24□□□□□ -1.25
CNOT1-219ENST00000569882 PTPRKQ15262 1439 aa7.24□□□□□ -1.25
CNOT1-219ENST00000569882 NCOA1Q15788 1441 aa7.24□□□□□ -1.25
CNOT1-219ENST00000569882 PRDM15P57071 1507 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-219ENST00000569882 DPYSL4O14531 572 aa7.23□□□□□ -1.25
CNOT1-219ENST00000569882 FBXO31Q5XUX0 539 aaPredicted RBP7.23□□□□□ -1.25
CNOT1-219ENST00000569882 ADGRL2O95490 1459 aa7.23□□□□□ -1.25
CNOT1-219ENST00000569882 HRO43593 1189 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms