RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 USP32Q8NFA0 1604 aa31.14■■■□□ 2.57
LINC00543-201ENST00000567234 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.12■■■□□ 2.57
LINC00543-201ENST00000567234 SETD1AO15047 1707 aaKnown RBP31.12■■■□□ 2.57
LINC00543-201ENST00000567234 BLMP54132 1417 aaPredicted RBP31.12■■■□□ 2.57
LINC00543-201ENST00000567234 SETD1BQ9UPS6 1966 aaKnown RBP31.1■■■□□ 2.57
LINC00543-201ENST00000567234 DLC1Q96QB1 1528 aa31.1■■■□□ 2.57
LINC00543-201ENST00000567234 FANCIQ9NVI1 1328 aa31.09■■■□□ 2.57
LINC00543-201ENST00000567234 NINLQ9Y2I6 1382 aa31.09■■■□□ 2.57
LINC00543-201ENST00000567234 ZNF142P52746 1687 aaPredicted RBP31.09■■■□□ 2.57
LINC00543-201ENST00000567234 NUDCQ9Y266 331 aa31.08■■■□□ 2.57
LINC00543-201ENST00000567234 KDM4FA0A1W2PPD8 638 aa31.08■■■□□ 2.57
LINC00543-201ENST00000567234 NRXN3Q9Y4C0 1643 aa31.07■■■□□ 2.56
LINC00543-201ENST00000567234 HDGFP51858 240 aaKnown RBP31.07■■■□□ 2.56
LINC00543-201ENST00000567234 ERICH6BQ5W0A0 696 aa31.07■■■□□ 2.56
LINC00543-201ENST00000567234 STK26Q9P289 416 aa31.06■■■□□ 2.56
LINC00543-201ENST00000567234 LTKP29376 864 aa31.05■■■□□ 2.56
LINC00543-201ENST00000567234 SLC12A5Q9H2X9 1139 aa31.05■■■□□ 2.56
LINC00543-201ENST00000567234 SLIT1O75093 1534 aa31.04■■■□□ 2.56
LINC00543-201ENST00000567234 NSD3Q9BZ95 1437 aa31.04■■■□□ 2.56
LINC00543-201ENST00000567234 ARHGAP23Q9P227 1491 aa31.04■■■□□ 2.56
LINC00543-201ENST00000567234 ANKRD36BQ8N2N9 1353 aa31.03■■■□□ 2.56
LINC00543-201ENST00000567234 THEMISQ8N1K5 641 aaPredicted RBP31.02■■■□□ 2.56
LINC00543-201ENST00000567234 PDE3BQ13370 1112 aa31.01■■■□□ 2.56
LINC00543-201ENST00000567234 PRAM1Q96QH2 718 aa31.01■■■□□ 2.56
LINC00543-201ENST00000567234 POGKQ9P215 609 aa31.01■■■□□ 2.55
LINC00543-201ENST00000567234 ATAD2Q6PL18 1390 aa31■■■□□ 2.55
LINC00543-201ENST00000567234 ABCC11Q96J66 1382 aa30.99■■■□□ 2.55
LINC00543-201ENST00000567234 TXNDC2Q86VQ3 553 aa30.99■■■□□ 2.55
LINC00543-201ENST00000567234 NSD2O96028 1365 aa30.97■■■□□ 2.55
LINC00543-201ENST00000567234 WDR43Q15061 677 aaKnown RBP eCLIP30.96■■■□□ 2.55
LINC00543-201ENST00000567234 CGNL1Q0VF96 1302 aa30.96■■■□□ 2.55
LINC00543-201ENST00000567234 CABP2Q9NPB3 220 aa30.96■■■□□ 2.55
LINC00543-201ENST00000567234 SAFB2Q14151 953 aaKnown RBP eCLIP30.95■■■□□ 2.55
LINC00543-201ENST00000567234 ADAMTS8Q9UP79 889 aa30.94■■■□□ 2.54
LINC00543-201ENST00000567234 KNDC1Q76NI1 1749 aa30.94■■■□□ 2.54
LINC00543-201ENST00000567234 BCANQ96GW7 911 aa30.93■■■□□ 2.54
LINC00543-201ENST00000567234 EID1Q9Y6B2 187 aa30.93■■■□□ 2.54
LINC00543-201ENST00000567234 SRPK2P78362 688 aaKnown RBP30.92■■■□□ 2.54
LINC00543-201ENST00000567234 PLEKHG1Q9ULL1 1385 aa30.92■■■□□ 2.54
LINC00543-201ENST00000567234 RNF123Q5XPI4 1314 aa30.91■■■□□ 2.54
LINC00543-201ENST00000567234 MINK1Q8N4C8 1332 aaPredicted RBP30.91■■■□□ 2.54
LINC00543-201ENST00000567234 POLR3AO14802 1390 aaPredicted RBP30.91■■■□□ 2.54
LINC00543-201ENST00000567234 ADAMTS13Q76LX8 1427 aa30.9■■■□□ 2.54
LINC00543-201ENST00000567234 MORC1Q86VD1 984 aa30.89■■■□□ 2.54
LINC00543-201ENST00000567234 SIRT1Q96EB6 747 aa30.89■■■□□ 2.54
LINC00543-201ENST00000567234 METP08581 1390 aa30.89■■■□□ 2.54
LINC00543-201ENST00000567234 TECPR2O15040 1411 aa30.87■■■□□ 2.53
LINC00543-201ENST00000567234 FAM135BQ49AJ0 1406 aa30.85■■■□□ 2.53
LINC00543-201ENST00000567234 TERF2IPQ9NYB0 399 aa30.85■■■□□ 2.53
LINC00543-201ENST00000567234 SLC26A8Q96RN1 970 aa30.84■■■□□ 2.53
LINC00543-201ENST00000567234 CDK19Q9BWU1 502 aa30.84■■■□□ 2.53
LINC00543-201ENST00000567234 A0A1W2PP64 1363 aa30.84■■■□□ 2.53
LINC00543-201ENST00000567234 CPS1P31327 1500 aa30.82■■■□□ 2.52
LINC00543-201ENST00000567234 MED14O60244 1454 aa30.82■■■□□ 2.52
LINC00543-201ENST00000567234 SENP3-EIF4A1A0A087X0R7 540 aa30.82■■■□□ 2.52
LINC00543-201ENST00000567234 ANKRD26Q9UPS8 1709 aa30.81■■■□□ 2.52
LINC00543-201ENST00000567234 CD163L1Q9NR16 1453 aa30.81■■■□□ 2.52
LINC00543-201ENST00000567234 IRX6P78412 446 aaPredicted RBP30.79■■■□□ 2.52
LINC00543-201ENST00000567234 ANKLE2Q86XL3 938 aa30.79■■■□□ 2.52
LINC00543-201ENST00000567234 WAPLQ7Z5K2 1190 aa30.78■■■□□ 2.52
LINC00543-201ENST00000567234 PLEKHH1Q9ULM0 1364 aa30.78■■■□□ 2.52
LINC00543-201ENST00000567234 PPP4R2Q9NY27 417 aa30.77■■■□□ 2.52
LINC00543-201ENST00000567234 SALL2Q9Y467 1007 aaPredicted RBP30.77■■■□□ 2.52
LINC00543-201ENST00000567234 NGEFQ8N5V2 710 aa30.77■■■□□ 2.52
LINC00543-201ENST00000567234 SHPRHQ149N8 1683 aa30.76■■■□□ 2.51
LINC00543-201ENST00000567234 ATP7BP35670 1465 aa30.76■■■□□ 2.51
LINC00543-201ENST00000567234 HDGFL2Q7Z4V5 671 aaPredicted RBP30.75■■■□□ 2.51
LINC00543-201ENST00000567234 PTPRUQ92729 1446 aa30.72■■■□□ 2.51
LINC00543-201ENST00000567234 NCKAP5LQ9HCH0 1330 aa30.72■■■□□ 2.51
LINC00543-201ENST00000567234 ZNF521Q96K83 1311 aa30.72■■■□□ 2.51
LINC00543-201ENST00000567234 DIP2AQ14689 1571 aa30.72■■■□□ 2.51
LINC00543-201ENST00000567234 HSPA2P54652 639 aa30.71■■■□□ 2.51
LINC00543-201ENST00000567234 KIF20BQ96Q89 1820 aa30.71■■■□□ 2.51
LINC00543-201ENST00000567234 WASLO00401 505 aaPredicted RBP30.7■■■□□ 2.51
LINC00543-201ENST00000567234 CFAP53Q96M91 514 aa30.7■■■□□ 2.51
LINC00543-201ENST00000567234 TBX22Q9Y458 520 aa30.7■■■□□ 2.5
LINC00543-201ENST00000567234 CDCA7LQ96GN5 454 aa30.69■■■□□ 2.5
LINC00543-201ENST00000567234 CABP1Q9NZU7 370 aa30.69■■■□□ 2.5
LINC00543-201ENST00000567234 LMTK3Q96Q04 1460 aa30.69■■■□□ 2.5
LINC00543-201ENST00000567234 MSH5O43196 834 aa30.68■■■□□ 2.5
LINC00543-201ENST00000567234 RCAN3Q9UKA8 241 aa30.68■■■□□ 2.5
LINC00543-201ENST00000567234 MTHFSP49914 203 aa30.68■■■□□ 2.5
LINC00543-201ENST00000567234 NPHP4O75161 1426 aaPredicted RBP30.66■■■□□ 2.5
LINC00543-201ENST00000567234 FYB1O15117 783 aa30.66■■■□□ 2.5
LINC00543-201ENST00000567234 TNNT2P45379 298 aaPredicted RBP30.66■■■□□ 2.5
LINC00543-201ENST00000567234 ADGRB2O60241 1585 aa30.65■■■□□ 2.5
LINC00543-201ENST00000567234 ERICH6Q7L0X2 663 aa30.65■■■□□ 2.5
LINC00543-201ENST00000567234 ROBO2Q9HCK4 1378 aa30.64■■■□□ 2.49
LINC00543-201ENST00000567234 CPSF1Q10570 1443 aaKnown RBP30.62■■■□□ 2.49
LINC00543-201ENST00000567234 GOLGA2Q08379 1002 aa30.61■■■□□ 2.49
LINC00543-201ENST00000567234 CCDC146Q8IYE0 955 aa30.61■■■□□ 2.49
LINC00543-201ENST00000567234 AMOTL2Q9Y2J4 779 aa30.61■■■□□ 2.49
LINC00543-201ENST00000567234 XRN1Q8IZH2 1706 aaKnown RBP30.61■■■□□ 2.49
LINC00543-201ENST00000567234 APAF1O14727 1248 aa30.6■■■□□ 2.49
LINC00543-201ENST00000567234 RRP1P56182 461 aaKnown RBP30.6■■■□□ 2.49
LINC00543-201ENST00000567234 GGNBP2Q9H3C7 697 aa30.59■■■□□ 2.49
LINC00543-201ENST00000567234 PPIP5K1Q6PFW1 1433 aa30.59■■■□□ 2.49
LINC00543-201ENST00000567234 CDC42BPGQ6DT37 1551 aa30.58■■■□□ 2.49
LINC00543-201ENST00000567234 CHD2O14647 1828 aaKnown RBP30.58■■■□□ 2.49
LINC00543-201ENST00000567234 EDC4Q6P2E9 1401 aaKnown RBP30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms