RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 XRN1Q8IZH2 1706 aaKnown RBP24.3■■□□□ 1.48
HERC2-208ENST00000566635 CABP2Q9NPB3 220 aa24.29■■□□□ 1.48
HERC2-208ENST00000566635 PER1O15534 1290 aaPredicted RBP24.29■■□□□ 1.48
HERC2-208ENST00000566635 NPHP4O75161 1426 aaPredicted RBP24.27■■□□□ 1.48
HERC2-208ENST00000566635 CCER2I3L3R5 266 aa24.26■■□□□ 1.47
HERC2-208ENST00000566635 SIRT1Q96EB6 747 aa24.26■■□□□ 1.47
HERC2-208ENST00000566635 AMOTL2Q9Y2J4 779 aa24.26■■□□□ 1.47
HERC2-208ENST00000566635 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.25■■□□□ 1.47
HERC2-208ENST00000566635 NCKAP5LQ9HCH0 1330 aa24.25■■□□□ 1.47
HERC2-208ENST00000566635 SRPK2P78362 688 aaKnown RBP24.25■■□□□ 1.47
HERC2-208ENST00000566635 PTCH1Q13635 1447 aa24.24■■□□□ 1.47
HERC2-208ENST00000566635 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
HERC2-208ENST00000566635 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
HERC2-208ENST00000566635 YTHDC1Q96MU7 727 aaKnown RBP24.23■■□□□ 1.47
HERC2-208ENST00000566635 PUS7Q96PZ0 661 aaKnown RBP24.23■■□□□ 1.47
HERC2-208ENST00000566635 PIK3R4Q99570 1358 aa24.22■■□□□ 1.47
HERC2-208ENST00000566635 CDK19Q9BWU1 502 aa24.22■■□□□ 1.47
HERC2-208ENST00000566635 SLC12A5Q9H2X9 1139 aa24.22■■□□□ 1.47
HERC2-208ENST00000566635 ADGRB2O60241 1585 aa24.21■■□□□ 1.47
HERC2-208ENST00000566635 LMTK3Q96Q04 1460 aa24.2■■□□□ 1.46
HERC2-208ENST00000566635 ATAD2Q6PL18 1390 aa24.19■■□□□ 1.46
HERC2-208ENST00000566635 KTN1Q86UP2 1357 aaKnown RBP24.19■■□□□ 1.46
HERC2-208ENST00000566635 HSPA2P54652 639 aa24.19■■□□□ 1.46
HERC2-208ENST00000566635 KCNA6P17658 529 aa24.17■■□□□ 1.46
HERC2-208ENST00000566635 CCDC184Q52MB2 194 aa24.17■■□□□ 1.46
HERC2-208ENST00000566635 CC2D1BQ5T0F9 858 aaKnown RBP24.17■■□□□ 1.46
HERC2-208ENST00000566635 CARD14Q9BXL6 1004 aa24.17■■□□□ 1.46
HERC2-208ENST00000566635 WASLO00401 505 aaPredicted RBP24.17■■□□□ 1.46
HERC2-208ENST00000566635 KNSTRNQ9Y448 316 aa24.17■■□□□ 1.46
HERC2-208ENST00000566635 PARD3Q8TEW0 1356 aa24.16■■□□□ 1.46
HERC2-208ENST00000566635 PELP1Q8IZL8 1130 aaKnown RBP24.16■■□□□ 1.46
HERC2-208ENST00000566635 AMER1Q5JTC6 1135 aaPredicted RBP24.14■■□□□ 1.46
HERC2-208ENST00000566635 NSD3Q9BZ95 1437 aa24.14■■□□□ 1.46
HERC2-208ENST00000566635 ANKRD36BQ8N2N9 1353 aa24.14■■□□□ 1.46
HERC2-208ENST00000566635 NINLQ9Y2I6 1382 aa24.14■■□□□ 1.46
HERC2-208ENST00000566635 CD163L1Q9NR16 1453 aa24.12■■□□□ 1.45
HERC2-208ENST00000566635 RALBP1Q15311 655 aa24.12■■□□□ 1.45
HERC2-208ENST00000566635 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
HERC2-208ENST00000566635 A0A1W2PP64 1363 aa24.11■■□□□ 1.45
HERC2-208ENST00000566635 ATP7BP35670 1465 aa24.11■■□□□ 1.45
HERC2-208ENST00000566635 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
HERC2-208ENST00000566635 MYBBP1AQ9BQG0 1328 aaKnown RBP24.09■■□□□ 1.45
HERC2-208ENST00000566635 NALCNQ8IZF0 1738 aa24.09■■□□□ 1.45
HERC2-208ENST00000566635 MRS2Q9HD23 443 aa24.08■■□□□ 1.45
HERC2-208ENST00000566635 TOPAZ1Q8N9V7 1692 aa24.08■■□□□ 1.45
HERC2-208ENST00000566635 CABP1Q9NZU7 370 aa24.08■■□□□ 1.45
HERC2-208ENST00000566635 STRCQ7RTU9 1775 aa24.07■■□□□ 1.44
HERC2-208ENST00000566635 NPC1L1Q9UHC9 1359 aa24.07■■□□□ 1.44
HERC2-208ENST00000566635 PPIP5K1Q6PFW1 1433 aa24.07■■□□□ 1.44
HERC2-208ENST00000566635 PRR36Q9H6K5 1346 aa24.07■■□□□ 1.44
HERC2-208ENST00000566635 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
HERC2-208ENST00000566635 RBM33Q96EV2 1170 aaKnown RBP24.04■■□□□ 1.44
HERC2-208ENST00000566635 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
HERC2-208ENST00000566635 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
HERC2-208ENST00000566635 TERF2IPQ9NYB0 399 aa24.02■■□□□ 1.44
HERC2-208ENST00000566635 STRCP1A6NGW2 1772 aa24.02■■□□□ 1.44
HERC2-208ENST00000566635 FMN2Q9NZ56 1722 aa24.02■■□□□ 1.44
HERC2-208ENST00000566635 ITSN1Q15811 1721 aa24.01■■□□□ 1.43
HERC2-208ENST00000566635 RGPD8O14715 1765 aaPredicted RBP24.01■■□□□ 1.43
HERC2-208ENST00000566635 AKAP12Q02952 1782 aa24■■□□□ 1.43
HERC2-208ENST00000566635 BRD4O60885 1362 aaPredicted RBP24■■□□□ 1.43
HERC2-208ENST00000566635 HDGFL2Q7Z4V5 671 aaPredicted RBP24■■□□□ 1.43
HERC2-208ENST00000566635 CCDC61Q9Y6R9 512 aa24■■□□□ 1.43
HERC2-208ENST00000566635 NLRP13Q86W25 1043 aa23.99■■□□□ 1.43
HERC2-208ENST00000566635 CGNL1Q0VF96 1302 aa23.99■■□□□ 1.43
HERC2-208ENST00000566635 NKTRP30414 1462 aaKnown RBP23.99■■□□□ 1.43
HERC2-208ENST00000566635 MON2Q7Z3U7 1717 aa23.98■■□□□ 1.43
HERC2-208ENST00000566635 CPSF1Q10570 1443 aaKnown RBP23.98■■□□□ 1.43
HERC2-208ENST00000566635 ADGRL3Q9HAR2 1447 aa23.98■■□□□ 1.43
HERC2-208ENST00000566635 KIF20BQ96Q89 1820 aa23.97■■□□□ 1.43
HERC2-208ENST00000566635 PPP2R1AP30153 589 aa23.96■■□□□ 1.43
HERC2-208ENST00000566635 FAM9BQ8IZU0 186 aa23.96■■□□□ 1.43
HERC2-208ENST00000566635 ANKRD26Q9UPS8 1709 aa23.95■■□□□ 1.42
HERC2-208ENST00000566635 NSD2O96028 1365 aa23.94■■□□□ 1.42
HERC2-208ENST00000566635 ANKARQ7Z5J8 1434 aa23.92■■□□□ 1.42
HERC2-208ENST00000566635 NRKQ7Z2Y5 1582 aa23.92■■□□□ 1.42
HERC2-208ENST00000566635 MORC1Q86VD1 984 aa23.91■■□□□ 1.42
HERC2-208ENST00000566635 EDC4Q6P2E9 1401 aaKnown RBP23.91■■□□□ 1.42
HERC2-208ENST00000566635 PROSER2Q86WR7 435 aaPredicted RBP23.9■■□□□ 1.42
HERC2-208ENST00000566635 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
HERC2-208ENST00000566635 PNISRQ8TF01 805 aaKnown RBP23.9■■□□□ 1.42
HERC2-208ENST00000566635 GGNBP2Q9H3C7 697 aa23.9■■□□□ 1.42
HERC2-208ENST00000566635 PLEKHG3A1L390 1219 aa23.89■■□□□ 1.42
HERC2-208ENST00000566635 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.89■■□□□ 1.42
HERC2-208ENST00000566635 ACEP12821 1306 aa23.89■■□□□ 1.42
HERC2-208ENST00000566635 FYB1O15117 783 aa23.88■■□□□ 1.41
HERC2-208ENST00000566635 CENPBP07199 599 aaPredicted RBP23.88■■□□□ 1.41
HERC2-208ENST00000566635 TNNT2P45379 298 aaPredicted RBP23.88■■□□□ 1.41
HERC2-208ENST00000566635 PMFBP1Q8TBY8 1022 aa23.87■■□□□ 1.41
HERC2-208ENST00000566635 TMEM94Q12767 1356 aa23.85■■□□□ 1.41
HERC2-208ENST00000566635 USP6P35125 1406 aa23.84■■□□□ 1.41
HERC2-208ENST00000566635 POLR3AO14802 1390 aaPredicted RBP23.83■■□□□ 1.41
HERC2-208ENST00000566635 ZNF692Q9BU19 519 aaPredicted RBP23.83■■□□□ 1.41
HERC2-208ENST00000566635 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
HERC2-208ENST00000566635 NME9Q86XW9 330 aa23.82■■□□□ 1.4
HERC2-208ENST00000566635 HNRNPUQ00839 825 aaKnown RBP eCLIP23.81■■□□□ 1.4
HERC2-208ENST00000566635 ZNF335Q9H4Z2 1342 aaPredicted RBP23.8■■□□□ 1.4
HERC2-208ENST00000566635 NGDNQ8NEJ9 315 aaKnown RBP23.8■■□□□ 1.4
HERC2-208ENST00000566635 ZRANB1Q9UGI0 708 aa23.79■■□□□ 1.4
HERC2-208ENST00000566635 SSH2Q76I76 1423 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms