RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 NALCNQ8IZF0 1738 aa16.63■□□□□ 0.25
FANCA-219ENST00000566133 FOXO3O43524 673 aa16.63■□□□□ 0.25
FANCA-219ENST00000566133 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
FANCA-219ENST00000566133 UPF1Q92900 1129 aaKnown RBP eCLIP16.62■□□□□ 0.25
FANCA-219ENST00000566133 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
FANCA-219ENST00000566133 PPLO60437 1756 aa16.61■□□□□ 0.25
FANCA-219ENST00000566133 LRPPRCP42704 1394 aaKnown RBP16.61■□□□□ 0.25
FANCA-219ENST00000566133 ABCC11Q96J66 1382 aa16.61■□□□□ 0.25
FANCA-219ENST00000566133 NHSL1Q5SYE7 1610 aa16.6■□□□□ 0.25
FANCA-219ENST00000566133 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
FANCA-219ENST00000566133 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
FANCA-219ENST00000566133 CFAP70Q5T0N1 1121 aa16.6■□□□□ 0.25
FANCA-219ENST00000566133 SIRT1Q96EB6 747 aa16.59■□□□□ 0.25
FANCA-219ENST00000566133 NPHP3Q7Z494 1330 aa16.59■□□□□ 0.25
FANCA-219ENST00000566133 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
FANCA-219ENST00000566133 USP21Q9UK80 565 aa16.58■□□□□ 0.24
FANCA-219ENST00000566133 PLEKHH1Q9ULM0 1364 aa16.58■□□□□ 0.24
FANCA-219ENST00000566133 IFT172Q9UG01 1749 aa16.57■□□□□ 0.24
FANCA-219ENST00000566133 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
FANCA-219ENST00000566133 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
FANCA-219ENST00000566133 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
FANCA-219ENST00000566133 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
FANCA-219ENST00000566133 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
FANCA-219ENST00000566133 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
FANCA-219ENST00000566133 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
FANCA-219ENST00000566133 TRPC5Q9UL62 973 aaPredicted RBP16.54■□□□□ 0.24
FANCA-219ENST00000566133 TECPR2O15040 1411 aa16.53■□□□□ 0.24
FANCA-219ENST00000566133 KRT28Q7Z3Y7 464 aa16.53■□□□□ 0.24
FANCA-219ENST00000566133 POGKQ9P215 609 aa16.53■□□□□ 0.24
FANCA-219ENST00000566133 PRAM1Q96QH2 718 aa16.52■□□□□ 0.24
FANCA-219ENST00000566133 CDK12Q9NYV4 1490 aaPredicted RBP16.51■□□□□ 0.23
FANCA-219ENST00000566133 DCAF11Q8TEB1 546 aa16.51■□□□□ 0.23
FANCA-219ENST00000566133 PSME1Q06323 249 aa16.5■□□□□ 0.23
FANCA-219ENST00000566133 PHF8Q9UPP1 1060 aa16.5■□□□□ 0.23
FANCA-219ENST00000566133 LAMC1P11047 1609 aa16.49■□□□□ 0.23
FANCA-219ENST00000566133 HRCP23327 699 aa16.49■□□□□ 0.23
FANCA-219ENST00000566133 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
FANCA-219ENST00000566133 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
FANCA-219ENST00000566133 CDC42BPGQ6DT37 1551 aa16.47■□□□□ 0.23
FANCA-219ENST00000566133 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
FANCA-219ENST00000566133 LMOD2Q6P5Q4 547 aa16.47■□□□□ 0.23
FANCA-219ENST00000566133 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.23
FANCA-219ENST00000566133 PMFBP1Q8TBY8 1022 aa16.46■□□□□ 0.23
FANCA-219ENST00000566133 PXDNQ92626 1479 aa16.46■□□□□ 0.23
FANCA-219ENST00000566133 RGS12O14924 1447 aa16.45■□□□□ 0.22
FANCA-219ENST00000566133 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
FANCA-219ENST00000566133 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
FANCA-219ENST00000566133 NRXN1Q9ULB1 1477 aa16.45■□□□□ 0.22
FANCA-219ENST00000566133 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
FANCA-219ENST00000566133 GJD4Q96KN9 370 aaPredicted RBP16.44■□□□□ 0.22
FANCA-219ENST00000566133 MYOM2P54296 1465 aa16.43■□□□□ 0.22
FANCA-219ENST00000566133 UNC5CLQ8IV45 518 aa16.43■□□□□ 0.22
FANCA-219ENST00000566133 MINK1Q8N4C8 1332 aaPredicted RBP16.43■□□□□ 0.22
FANCA-219ENST00000566133 BCL9LQ86UU0 1499 aa16.42■□□□□ 0.22
FANCA-219ENST00000566133 ATRNO75882 1429 aa16.41■□□□□ 0.22
FANCA-219ENST00000566133 KNDC1Q76NI1 1749 aa16.41■□□□□ 0.22
FANCA-219ENST00000566133 COL22A1Q8NFW1 1626 aaPredicted RBP16.4■□□□□ 0.22
FANCA-219ENST00000566133 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
FANCA-219ENST00000566133 FMN2Q9NZ56 1722 aa16.39■□□□□ 0.21
FANCA-219ENST00000566133 ATAD2Q6PL18 1390 aa16.38■□□□□ 0.21
FANCA-219ENST00000566133 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
FANCA-219ENST00000566133 RGPD8O14715 1765 aaPredicted RBP16.37■□□□□ 0.21
FANCA-219ENST00000566133 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
FANCA-219ENST00000566133 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
FANCA-219ENST00000566133 CCDC9Q9Y3X0 531 aaKnown RBP16.36■□□□□ 0.21
FANCA-219ENST00000566133 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
FANCA-219ENST00000566133 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
FANCA-219ENST00000566133 PRR36Q9H6K5 1346 aa16.35■□□□□ 0.21
FANCA-219ENST00000566133 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
FANCA-219ENST00000566133 PAK3O75914 559 aaPredicted RBP16.34■□□□□ 0.21
FANCA-219ENST00000566133 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
FANCA-219ENST00000566133 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
FANCA-219ENST00000566133 ANKARQ7Z5J8 1434 aa16.34■□□□□ 0.21
FANCA-219ENST00000566133 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
FANCA-219ENST00000566133 VPS72Q15906 364 aa16.33■□□□□ 0.2
FANCA-219ENST00000566133 NUDT16Q96DE0 195 aaKnown RBP16.33■□□□□ 0.2
FANCA-219ENST00000566133 SLIT2O94813 1529 aa16.33■□□□□ 0.2
FANCA-219ENST00000566133 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
FANCA-219ENST00000566133 SEPT12Q8IYM1 358 aa16.32■□□□□ 0.2
FANCA-219ENST00000566133 CDK19Q9BWU1 502 aa16.32■□□□□ 0.2
FANCA-219ENST00000566133 EIF3AQ14152 1382 aaKnown RBP16.31■□□□□ 0.2
FANCA-219ENST00000566133 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
FANCA-219ENST00000566133 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
FANCA-219ENST00000566133 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
FANCA-219ENST00000566133 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
FANCA-219ENST00000566133 MARF1Q9Y4F3 1742 aaKnown RBP16.29■□□□□ 0.2
FANCA-219ENST00000566133 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
FANCA-219ENST00000566133 A0A0G2JS52 829 aa16.26■□□□□ 0.19
FANCA-219ENST00000566133 MYT1Q01538 1121 aa16.26■□□□□ 0.19
FANCA-219ENST00000566133 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
FANCA-219ENST00000566133 KRT27Q7Z3Y8 459 aa16.26■□□□□ 0.19
FANCA-219ENST00000566133 CCDC61Q9Y6R9 512 aa16.26■□□□□ 0.19
FANCA-219ENST00000566133 USP32Q8NFA0 1604 aa16.26■□□□□ 0.19
FANCA-219ENST00000566133 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
FANCA-219ENST00000566133 FAM98CQ17RN3 349 aaKnown RBP16.25■□□□□ 0.19
FANCA-219ENST00000566133 NUTM2GQ5VZR2 741 aa16.25■□□□□ 0.19
FANCA-219ENST00000566133 ADGRB2O60241 1585 aa16.24■□□□□ 0.19
FANCA-219ENST00000566133 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
FANCA-219ENST00000566133 ACEP12821 1306 aa16.23■□□□□ 0.19
FANCA-219ENST00000566133 GLI3P10071 1580 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms