RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
FANCA-219ENST00000566133 ABCC9O60706 1549 aa24.97■■□□□ 1.59
FANCA-219ENST00000566133 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
FANCA-219ENST00000566133 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
FANCA-219ENST00000566133 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
FANCA-219ENST00000566133 NACADO15069 1562 aa23.55■■□□□ 1.36
FANCA-219ENST00000566133 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
FANCA-219ENST00000566133 PABPN1Q86U42 306 aaKnown RBP eCLIP23.39■■□□□ 1.333e-7■□□□□ 8.9
FANCA-219ENST00000566133 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
FANCA-219ENST00000566133 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
FANCA-219ENST00000566133 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
FANCA-219ENST00000566133 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
FANCA-219ENST00000566133 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
FANCA-219ENST00000566133 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
FANCA-219ENST00000566133 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
FANCA-219ENST00000566133 CC2D2AQ9P2K1 1620 aa22.49■■□□□ 1.19
FANCA-219ENST00000566133 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
FANCA-219ENST00000566133 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
FANCA-219ENST00000566133 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
FANCA-219ENST00000566133 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
FANCA-219ENST00000566133 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
FANCA-219ENST00000566133 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
FANCA-219ENST00000566133 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
FANCA-219ENST00000566133 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
FANCA-219ENST00000566133 ERCC6Q03468 1493 aa21.55■■□□□ 1.04
FANCA-219ENST00000566133 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
FANCA-219ENST00000566133 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.03
FANCA-219ENST00000566133 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
FANCA-219ENST00000566133 NESP48681 1621 aa21.45■■□□□ 1.02
FANCA-219ENST00000566133 CUX2O14529 1486 aa21.44■■□□□ 1.02
FANCA-219ENST00000566133 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
FANCA-219ENST00000566133 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
FANCA-219ENST00000566133 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
FANCA-219ENST00000566133 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
FANCA-219ENST00000566133 WIZO95785 1651 aa21.18■□□□□ 0.98
FANCA-219ENST00000566133 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
FANCA-219ENST00000566133 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
FANCA-219ENST00000566133 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
FANCA-219ENST00000566133 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
FANCA-219ENST00000566133 CFTRP13569 1480 aa20.89■□□□□ 0.94
FANCA-219ENST00000566133 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
FANCA-219ENST00000566133 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
FANCA-219ENST00000566133 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
FANCA-219ENST00000566133 WDR62O43379 1518 aa20.85■□□□□ 0.93
FANCA-219ENST00000566133 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
FANCA-219ENST00000566133 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
FANCA-219ENST00000566133 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
FANCA-219ENST00000566133 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
FANCA-219ENST00000566133 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
FANCA-219ENST00000566133 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
FANCA-219ENST00000566133 IFT140Q96RY7 1462 aa20.49■□□□□ 0.87
FANCA-219ENST00000566133 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
FANCA-219ENST00000566133 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
FANCA-219ENST00000566133 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
FANCA-219ENST00000566133 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
FANCA-219ENST00000566133 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
FANCA-219ENST00000566133 AQRO60306 1485 aaKnown RBP eCLIP20.35■□□□□ 0.854e-9■■■■□ 24.7
FANCA-219ENST00000566133 FBLN2P98095 1184 aa20.32■□□□□ 0.84
FANCA-219ENST00000566133 SOGA1O94964 1423 aa20.28■□□□□ 0.84
FANCA-219ENST00000566133 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
FANCA-219ENST00000566133 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
FANCA-219ENST00000566133 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
FANCA-219ENST00000566133 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
FANCA-219ENST00000566133 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
FANCA-219ENST00000566133 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
FANCA-219ENST00000566133 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
FANCA-219ENST00000566133 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
FANCA-219ENST00000566133 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
FANCA-219ENST00000566133 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
FANCA-219ENST00000566133 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
FANCA-219ENST00000566133 CHMP7Q8WUX9 453 aaPredicted RBP20.15■□□□□ 0.82
FANCA-219ENST00000566133 ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
FANCA-219ENST00000566133 CUX1P39880 1505 aa20.13■□□□□ 0.81
FANCA-219ENST00000566133 CHD1O14646 1710 aa20.07■□□□□ 0.8
FANCA-219ENST00000566133 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
FANCA-219ENST00000566133 GRIN2BQ13224 1484 aa20.03■□□□□ 0.8
FANCA-219ENST00000566133 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
FANCA-219ENST00000566133 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
FANCA-219ENST00000566133 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
FANCA-219ENST00000566133 TRHP20396 242 aaPredicted RBP19.98■□□□□ 0.79
FANCA-219ENST00000566133 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
FANCA-219ENST00000566133 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
FANCA-219ENST00000566133 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
FANCA-219ENST00000566133 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
FANCA-219ENST00000566133 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
FANCA-219ENST00000566133 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
FANCA-219ENST00000566133 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
FANCA-219ENST00000566133 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
FANCA-219ENST00000566133 TOP2BQ02880 1626 aa19.79■□□□□ 0.76
FANCA-219ENST00000566133 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
FANCA-219ENST00000566133 GRIN2AQ12879 1464 aa19.74■□□□□ 0.75
FANCA-219ENST00000566133 FHAD1B1AJZ9 1412 aa19.73■□□□□ 0.75
FANCA-219ENST00000566133 NUP160Q12769 1436 aa19.68■□□□□ 0.74
FANCA-219ENST00000566133 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
FANCA-219ENST00000566133 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
FANCA-219ENST00000566133 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
FANCA-219ENST00000566133 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
FANCA-219ENST00000566133 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
FANCA-219ENST00000566133 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
FANCA-219ENST00000566133 IGF1RP08069 1367 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms